RNA–Protein interactions for RNA: ENST00000509589.5

CYSTM1-203, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 3

Gene CYSTM1, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-203ENST00000509589 CEMIPQ8WUJ3 1361 aa13.86□□□□□ -0.19
CYSTM1-203ENST00000509589 PRAMEF22A3QJZ6 481 aa13.86□□□□□ -0.19
CYSTM1-203ENST00000509589 NPHP1O15259 732 aa13.86□□□□□ -0.19
CYSTM1-203ENST00000509589 STYK1Q6J9G0 422 aa13.86□□□□□ -0.19
CYSTM1-203ENST00000509589 CHADLQ6NUI6 762 aa13.86□□□□□ -0.19
CYSTM1-203ENST00000509589 PHACTR3Q96KR7 559 aa13.86□□□□□ -0.19
CYSTM1-203ENST00000509589 FMNL2Q96PY5 1086 aa13.86□□□□□ -0.19
CYSTM1-203ENST00000509589 TEX13AQ9BXU3 409 aaPredicted RBP13.86□□□□□ -0.19
CYSTM1-203ENST00000509589 CREBZFQ9NS37 354 aa13.86□□□□□ -0.19
CYSTM1-203ENST00000509589 PDZRN3Q9UPQ7 1066 aa13.86□□□□□ -0.19
CYSTM1-203ENST00000509589 DZIP3Q86Y13 1208 aaKnown RBP13.85□□□□□ -0.19
CYSTM1-203ENST00000509589 GAS2L2Q8NHY3 880 aa13.85□□□□□ -0.19
CYSTM1-203ENST00000509589 CNKSR1Q969H4 720 aa13.85□□□□□ -0.19
CYSTM1-203ENST00000509589 USP16Q9Y5T5 823 aa13.85□□□□□ -0.19
CYSTM1-203ENST00000509589 DLG5Q8TDM6 1919 aa13.85□□□□□ -0.19
CYSTM1-203ENST00000509589 ST5P78524 1137 aa13.84□□□□□ -0.19
CYSTM1-203ENST00000509589 OLFM4Q6UX06 510 aa13.84□□□□□ -0.19
CYSTM1-203ENST00000509589 C7orf43Q8WVR3 580 aa13.84□□□□□ -0.19
CYSTM1-203ENST00000509589 MASTLQ96GX5 879 aa13.84□□□□□ -0.19
CYSTM1-203ENST00000509589 BTBD11A6QL63 1104 aa13.83□□□□□ -0.2
CYSTM1-203ENST00000509589 PRKAR2BP31323 418 aa13.83□□□□□ -0.2
CYSTM1-203ENST00000509589 ZNF541Q9H0D2 1346 aa13.83□□□□□ -0.2
CYSTM1-203ENST00000509589 NPM2Q86SE8 214 aaKnown RBP13.82□□□□□ -0.2
CYSTM1-203ENST00000509589 NBPF5PQ86XG9 351 aaPredicted RBP13.82□□□□□ -0.2
CYSTM1-203ENST00000509589 ZNF277Q9NRM2 450 aaPredicted RBP13.82□□□□□ -0.2
CYSTM1-203ENST00000509589 PASKQ96RG2 1323 aa13.82□□□□□ -0.2
CYSTM1-203ENST00000509589 CNTNAP1P78357 1384 aa13.82□□□□□ -0.2
CYSTM1-203ENST00000509589 FAM177BA6PVY3 158 aa13.81□□□□□ -0.2
CYSTM1-203ENST00000509589 FOXN1O15353 648 aa13.81□□□□□ -0.2
CYSTM1-203ENST00000509589 L3MBTL3Q96JM7 780 aaPredicted RBP13.81□□□□□ -0.2
CYSTM1-203ENST00000509589 RSPH6AQ9H0K4 717 aa13.81□□□□□ -0.2
CYSTM1-203ENST00000509589 TAF1DQ9H5J8 278 aaPredicted RBP13.81□□□□□ -0.2
CYSTM1-203ENST00000509589 NPC1L1Q9UHC9 1359 aa13.81□□□□□ -0.2
CYSTM1-203ENST00000509589 NBPF26B4DH59 902 aa13.8□□□□□ -0.2
CYSTM1-203ENST00000509589 CCDC93Q567U6 631 aa13.8□□□□□ -0.2
CYSTM1-203ENST00000509589 SOGA3Q5TF21 947 aa13.8□□□□□ -0.2
CYSTM1-203ENST00000509589 NBPF10Q6P3W6 841 aaKnown RBP13.8□□□□□ -0.2
CYSTM1-203ENST00000509589 MCM10Q7L590 875 aa13.8□□□□□ -0.2
CYSTM1-203ENST00000509589 LDHDQ86WU2 507 aa13.8□□□□□ -0.2
CYSTM1-203ENST00000509589 NBPF15Q8N660 670 aa13.8□□□□□ -0.2
CYSTM1-203ENST00000509589 LAMB4A4D0S4 1761 aa13.8□□□□□ -0.2
CYSTM1-203ENST00000509589 NUP98P52948 1817 aa13.8□□□□□ -0.2
CYSTM1-203ENST00000509589 IQCA1LA6NCM1 817 aa13.79□□□□□ -0.2
CYSTM1-203ENST00000509589 NPR1P16066 1061 aa13.79□□□□□ -0.2
CYSTM1-203ENST00000509589 FKBP4Q02790 459 aaKnown RBP eCLIP13.79□□□□□ -0.2
CYSTM1-203ENST00000509589 EAPPQ56P03 285 aaPredicted RBP13.79□□□□□ -0.2
CYSTM1-203ENST00000509589 CLEC4GQ6UXB4 293 aa13.79□□□□□ -0.2
CYSTM1-203ENST00000509589 ADAMTSL1Q8N6G6 1762 aa13.78□□□□□ -0.2
CYSTM1-203ENST00000509589 SCN4AP35499 1836 aa13.78□□□□□ -0.2
CYSTM1-203ENST00000509589 KLRG2A4D1S0 409 aaPredicted RBP13.78□□□□□ -0.2
CYSTM1-203ENST00000509589 ITGBL1O95965 494 aaPredicted RBP13.78□□□□□ -0.2
CYSTM1-203ENST00000509589 VEGFBP49765 207 aa13.78□□□□□ -0.2
CYSTM1-203ENST00000509589 DCTN1Q14203 1278 aa13.78□□□□□ -0.2
CYSTM1-203ENST00000509589 NIP7Q9Y221 180 aaKnown RBP eCLIP13.78□□□□□ -0.2
CYSTM1-203ENST00000509589 SNRPA1P09661 255 aaKnown RBP13.77□□□□□ -0.21
CYSTM1-203ENST00000509589 HLFQ16534 295 aa13.77□□□□□ -0.21
CYSTM1-203ENST00000509589 RNF123Q5XPI4 1314 aa13.77□□□□□ -0.21
CYSTM1-203ENST00000509589 SLC51AQ86UW1 340 aa13.77□□□□□ -0.21
CYSTM1-203ENST00000509589 ZNF652Q9Y2D9 606 aa13.77□□□□□ -0.21
CYSTM1-203ENST00000509589 COL4A5P29400 1685 aa13.76□□□□□ -0.21
CYSTM1-203ENST00000509589 SNED1Q8TER0 1413 aa13.76□□□□□ -0.21
CYSTM1-203ENST00000509589 ABCC12Q96J65 1359 aa13.76□□□□□ -0.21
CYSTM1-203ENST00000509589 TMEM88BA6NKF7 163 aa13.76□□□□□ -0.21
CYSTM1-203ENST00000509589 HACL1Q9UJ83 578 aa13.76□□□□□ -0.21
CYSTM1-203ENST00000509589 U2AF1L5P0DN76 240 aaPredicted RBP13.75□□□□□ -0.21
CYSTM1-203ENST00000509589 EPHX2P34913 555 aa13.75□□□□□ -0.21
CYSTM1-203ENST00000509589 U2AF1Q01081 240 aaKnown RBP eCLIP13.75□□□□□ -0.21
CYSTM1-203ENST00000509589 MAP1SQ66K74 1059 aaPredicted RBP13.75□□□□□ -0.21
CYSTM1-203ENST00000509589 TPTE2Q6XPS3 522 aa13.75□□□□□ -0.21
CYSTM1-203ENST00000509589 SYNE4Q8N205 404 aa13.75□□□□□ -0.21
CYSTM1-203ENST00000509589 NGEFQ8N5V2 710 aa13.75□□□□□ -0.21
CYSTM1-203ENST00000509589 MIS18AQ9NYP9 233 aa13.75□□□□□ -0.21
CYSTM1-203ENST00000509589 CLEC11AQ9Y240 323 aa13.75□□□□□ -0.21
CYSTM1-203ENST00000509589 KDM3BQ7LBC6 1761 aa13.75□□□□□ -0.21
CYSTM1-203ENST00000509589 FZD9O00144 591 aa13.74□□□□□ -0.21
CYSTM1-203ENST00000509589 IARSP41252 1262 aaKnown RBP13.74□□□□□ -0.21
CYSTM1-203ENST00000509589 NUTM1Q86Y26 1132 aa13.74□□□□□ -0.21
CYSTM1-203ENST00000509589 RTKN2Q8IZC4 609 aa13.74□□□□□ -0.21
CYSTM1-203ENST00000509589 RTF1Q92541 710 aaKnown RBP13.74□□□□□ -0.21
CYSTM1-203ENST00000509589 CFAP53Q96M91 514 aa13.74□□□□□ -0.21
CYSTM1-203ENST00000509589 PRDM10Q9NQV6 1147 aa13.74□□□□□ -0.21
CYSTM1-203ENST00000509589 CNTROBQ8N137 903 aa13.73□□□□□ -0.21
CYSTM1-203ENST00000509589 WBP1LQ9NX94 342 aa13.73□□□□□ -0.21
CYSTM1-203ENST00000509589 LTBP1Q14766 1721 aa13.73□□□□□ -0.21
CYSTM1-203ENST00000509589 CTCFP49711 727 aaPredicted RBP13.72□□□□□ -0.21
CYSTM1-203ENST00000509589 LBX1P52954 281 aa13.72□□□□□ -0.21
CYSTM1-203ENST00000509589 FMR1Q06787 632 aaKnown RBP eCLIP13.72□□□□□ -0.21
CYSTM1-203ENST00000509589 CRY2Q49AN0 593 aa13.72□□□□□ -0.21
CYSTM1-203ENST00000509589 AIDAQ96BJ3 306 aa13.72□□□□□ -0.21
CYSTM1-203ENST00000509589 RASSF10A6NK89 507 aa13.71□□□□□ -0.21
CYSTM1-203ENST00000509589 RGL2O15211 777 aa13.71□□□□□ -0.21
CYSTM1-203ENST00000509589 GTF2E1P29083 439 aaPredicted RBP13.71□□□□□ -0.21
CYSTM1-203ENST00000509589 PPP2R1AP30153 589 aa13.71□□□□□ -0.21
CYSTM1-203ENST00000509589 ALDH1B1P30837 517 aa13.71□□□□□ -0.21
CYSTM1-203ENST00000509589 PNMA8AQ86V59 439 aaPredicted RBP13.71□□□□□ -0.21
CYSTM1-203ENST00000509589 GPC2Q8N158 579 aa13.71□□□□□ -0.21
CYSTM1-203ENST00000509589 NUDCQ9Y266 331 aa13.71□□□□□ -0.21
CYSTM1-203ENST00000509589 DEFB115Q30KQ5 88 aa13.7□□□□□ -0.22
CYSTM1-203ENST00000509589 TTLL7Q6ZT98 887 aa13.7□□□□□ -0.22
CYSTM1-203ENST00000509589 PSMD1Q99460 953 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 846.3 ms