RNA–Protein interactions for RNA: ENST00000509518.1

CHRNA9-203, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

TSL 3

Gene CHRNA9, Length 465 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-203ENST00000509518 UPF3BQ9BZI7 483 aaKnown RBP11.29□□□□□ -0.6
CHRNA9-203ENST00000509518 TRIM5Q9C035 493 aa11.29□□□□□ -0.6
CHRNA9-203ENST00000509518 BABAM1Q9NWV8 329 aa11.29□□□□□ -0.6
CHRNA9-203ENST00000509518 FAM53CQ9NYF3 392 aa11.29□□□□□ -0.6
CHRNA9-203ENST00000509518 HDAC5Q9UQL6 1122 aa11.29□□□□□ -0.6
CHRNA9-203ENST00000509518 SNX14Q9Y5W7 946 aa11.29□□□□□ -0.6
CHRNA9-203ENST00000509518 CYP46A1Q9Y6A2 500 aa11.29□□□□□ -0.6
CHRNA9-203ENST00000509518 MRVI1Q9Y6F6 885 aa11.29□□□□□ -0.6
CHRNA9-203ENST00000509518 A2ML1A8K2U0 1454 aa11.29□□□□□ -0.6
CHRNA9-203ENST00000509518 DIP2AQ14689 1571 aa11.28□□□□□ -0.6
CHRNA9-203ENST00000509518 MED1Q15648 1581 aaPredicted RBP11.28□□□□□ -0.6
CHRNA9-203ENST00000509518 TECPR2O15040 1411 aa11.28□□□□□ -0.6
CHRNA9-203ENST00000509518 USP54Q70EL1 1684 aa11.28□□□□□ -0.6
CHRNA9-203ENST00000509518 ATP8B1O43520 1251 aa11.28□□□□□ -0.6
CHRNA9-203ENST00000509518 GIGYF1O75420 1035 aaPredicted RBP11.28□□□□□ -0.6
CHRNA9-203ENST00000509518 SLU7O95391 586 aaKnown RBP11.28□□□□□ -0.6
CHRNA9-203ENST00000509518 PSMA5P28066 241 aa11.28□□□□□ -0.6
CHRNA9-203ENST00000509518 GJB2P29033 226 aa11.28□□□□□ -0.6
CHRNA9-203ENST00000509518 TPM4P67936 248 aa11.28□□□□□ -0.6
CHRNA9-203ENST00000509518 PDE4CQ08493 712 aa11.28□□□□□ -0.6
CHRNA9-203ENST00000509518 PTPN14Q15678 1187 aa11.28□□□□□ -0.6
CHRNA9-203ENST00000509518 CCDC186Q7Z3E2 898 aa11.28□□□□□ -0.6
CHRNA9-203ENST00000509518 KCNB2Q92953 911 aa11.28□□□□□ -0.6
CHRNA9-203ENST00000509518 CABP1Q9NZU7 370 aa11.28□□□□□ -0.6
CHRNA9-203ENST00000509518 CLIP2Q9UDT6 1046 aa11.28□□□□□ -0.6
CHRNA9-203ENST00000509518 PEAK1Q9H792 1746 aa11.27□□□□□ -0.61
CHRNA9-203ENST00000509518 ZKSCAN1P17029 563 aaPredicted RBP11.27□□□□□ -0.61
CHRNA9-203ENST00000509518 SAFB2Q14151 953 aaKnown RBP eCLIP11.27□□□□□ -0.61
CHRNA9-203ENST00000509518 STX1AQ16623 288 aa11.27□□□□□ -0.61
CHRNA9-203ENST00000509518 CCDC30Q5VVM6 783 aa11.27□□□□□ -0.61
CHRNA9-203ENST00000509518 TXLNBQ8N3L3 684 aa11.27□□□□□ -0.61
CHRNA9-203ENST00000509518 CCDC150Q8NCX0 1101 aa11.27□□□□□ -0.61
CHRNA9-203ENST00000509518 CHMP4CQ96CF2 233 aa11.27□□□□□ -0.61
CHRNA9-203ENST00000509518 CHAMP1Q96JM3 812 aa11.27□□□□□ -0.61
CHRNA9-203ENST00000509518 ALDH8A1Q9H2A2 487 aaPredicted RBP11.27□□□□□ -0.61
CHRNA9-203ENST00000509518 CBX8Q9HC52 389 aa11.27□□□□□ -0.61
CHRNA9-203ENST00000509518 PDRG1Q9NUG6 133 aa11.27□□□□□ -0.61
CHRNA9-203ENST00000509518 STK26Q9P289 416 aa11.27□□□□□ -0.61
CHRNA9-203ENST00000509518 IMPACTQ9P2X3 320 aa11.27□□□□□ -0.61
CHRNA9-203ENST00000509518 OVOS2A0A0J9YW53 1432 aa11.26□□□□□ -0.61
CHRNA9-203ENST00000509518 OVOS2Q6IE36 1432 aa11.26□□□□□ -0.61
CHRNA9-203ENST00000509518 VPS37CA5D8V6 355 aaPredicted RBP11.26□□□□□ -0.61
CHRNA9-203ENST00000509518 GLRX3O76003 335 aaKnown RBP11.26□□□□□ -0.61
CHRNA9-203ENST00000509518 SLC4A2P04920 1241 aa11.26□□□□□ -0.61
CHRNA9-203ENST00000509518 DNM1Q05193 864 aaKnown RBP11.26□□□□□ -0.61
CHRNA9-203ENST00000509518 GPS2Q13227 327 aa11.26□□□□□ -0.61
CHRNA9-203ENST00000509518 ATL3Q6DD88 541 aa11.26□□□□□ -0.61
CHRNA9-203ENST00000509518 GGT6Q6P531 493 aa11.26□□□□□ -0.61
CHRNA9-203ENST00000509518 RUFY3Q7L099 469 aa11.26□□□□□ -0.61
CHRNA9-203ENST00000509518 FILIP1Q7Z7B0 1213 aa11.26□□□□□ -0.61
CHRNA9-203ENST00000509518 KIF1BPQ96EK5 621 aa11.26□□□□□ -0.61
CHRNA9-203ENST00000509518 SRRTQ9BXP5 876 aaKnown RBP11.26□□□□□ -0.61
CHRNA9-203ENST00000509518 LSG1Q9H089 658 aaKnown RBP11.26□□□□□ -0.61
CHRNA9-203ENST00000509518 EXOC6BQ9Y2D4 811 aa11.26□□□□□ -0.61
CHRNA9-203ENST00000509518 EMILIN1Q9Y6C2 1016 aa11.26□□□□□ -0.61
CHRNA9-203ENST00000509518 NRXN3Q9Y4C0 1643 aa11.26□□□□□ -0.61
CHRNA9-203ENST00000509518 UBTFL1P0CB47 393 aaPredicted RBP11.25□□□□□ -0.61
CHRNA9-203ENST00000509518 ANO6Q4KMQ2 910 aa11.25□□□□□ -0.61
CHRNA9-203ENST00000509518 CTR9Q6PD62 1173 aa11.25□□□□□ -0.61
CHRNA9-203ENST00000509518 NYAP1Q6ZVC0 841 aa11.25□□□□□ -0.61
CHRNA9-203ENST00000509518 ERC1Q8IUD2 1116 aa11.25□□□□□ -0.61
CHRNA9-203ENST00000509518 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.25□□□□□ -0.61
CHRNA9-203ENST00000509518 SSH3Q8TE77 659 aa11.25□□□□□ -0.61
CHRNA9-203ENST00000509518 SIRT1Q96EB6 747 aa11.25□□□□□ -0.61
CHRNA9-203ENST00000509518 SPATA32Q96LK8 384 aa11.25□□□□□ -0.61
CHRNA9-203ENST00000509518 NAT10Q9H0A0 1025 aaKnown RBP11.25□□□□□ -0.61
CHRNA9-203ENST00000509518 ZSWIM6Q9HCJ5 1215 aa11.25□□□□□ -0.61
CHRNA9-203ENST00000509518 TMEM51Q9NW97 253 aa11.25□□□□□ -0.61
CHRNA9-203ENST00000509518 HYPKQ9NX55 129 aa11.25□□□□□ -0.61
CHRNA9-203ENST00000509518 CWC15Q9P013 229 aaKnown RBP11.25□□□□□ -0.61
CHRNA9-203ENST00000509518 V9GYY5 206 aaPredicted RBP11.25□□□□□ -0.61
CHRNA9-203ENST00000509518 AP5Z1O43299 807 aa11.24□□□□□ -0.61
CHRNA9-203ENST00000509518 CASTP20810 708 aaKnown RBP11.24□□□□□ -0.61
CHRNA9-203ENST00000509518 ZNF165P49910 485 aa11.24□□□□□ -0.61
CHRNA9-203ENST00000509518 SLC4A10Q6U841 1118 aa11.24□□□□□ -0.61
CHRNA9-203ENST00000509518 CCDC83Q8IWF9 413 aa11.24□□□□□ -0.61
CHRNA9-203ENST00000509518 NOL10Q9BSC4 688 aaKnown RBP11.24□□□□□ -0.61
CHRNA9-203ENST00000509518 ZSCAN16Q9H4T2 348 aaPredicted RBP11.24□□□□□ -0.61
CHRNA9-203ENST00000509518 HMG20BQ9P0W2 317 aa11.24□□□□□ -0.61
CHRNA9-203ENST00000509518 CFAP45Q9UL16 551 aa11.24□□□□□ -0.61
CHRNA9-203ENST00000509518 KDM3BQ7LBC6 1761 aa11.23□□□□□ -0.61
CHRNA9-203ENST00000509518 TSPOAP1O95153 1857 aa11.23□□□□□ -0.61
CHRNA9-203ENST00000509518 ZBTB7CA1YPR0 619 aa11.23□□□□□ -0.61
CHRNA9-203ENST00000509518 PSDA5PKW4 1024 aaPredicted RBP11.23□□□□□ -0.61
CHRNA9-203ENST00000509518 TULP2O00295 520 aa11.23□□□□□ -0.61
CHRNA9-203ENST00000509518 FOXD4L6Q3SYB3 417 aaPredicted RBP11.23□□□□□ -0.61
CHRNA9-203ENST00000509518 MUM1L1Q5H9M0 696 aa11.23□□□□□ -0.61
CHRNA9-203ENST00000509518 FOXD4L3Q6VB84 417 aaPredicted RBP11.23□□□□□ -0.61
CHRNA9-203ENST00000509518 JARID2Q92833 1246 aaPredicted RBP11.23□□□□□ -0.61
CHRNA9-203ENST00000509518 TSPYL4Q9UJ04 414 aa11.23□□□□□ -0.61
CHRNA9-203ENST00000509518 RFX7Q2KHR2 1363 aa11.23□□□□□ -0.61
CHRNA9-203ENST00000509518 SLIT1O75093 1534 aa11.23□□□□□ -0.61
CHRNA9-203ENST00000509518 FAM177BA6PVY3 158 aa11.22□□□□□ -0.61
CHRNA9-203ENST00000509518 CYP2C19P33261 490 aa11.22□□□□□ -0.61
CHRNA9-203ENST00000509518 AGLP35573 1532 aa11.22□□□□□ -0.61
CHRNA9-203ENST00000509518 KDRP35968 1356 aa11.22□□□□□ -0.61
CHRNA9-203ENST00000509518 KCNJ4P48050 445 aa11.22□□□□□ -0.61
CHRNA9-203ENST00000509518 FLIIQ13045 1269 aa11.22□□□□□ -0.61
CHRNA9-203ENST00000509518 IDI1Q13907 227 aa11.22□□□□□ -0.61
CHRNA9-203ENST00000509518 POLA2Q14181 598 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms