RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 FAM177BA6PVY3 158 aa20.31■□□□□ 0.84
TPM3-219ENST00000509409 APLP1P51693 650 aa20.31■□□□□ 0.84
TPM3-219ENST00000509409 TPTE2Q6XPS3 522 aa20.31■□□□□ 0.84
TPM3-219ENST00000509409 RBM46Q8TBY0 533 aaKnown RBP20.31■□□□□ 0.84
TPM3-219ENST00000509409 NIP7Q9Y221 180 aaKnown RBP eCLIP20.31■□□□□ 0.84
TPM3-219ENST00000509409 DDX10Q13206 875 aaKnown RBP20.3■□□□□ 0.84
TPM3-219ENST00000509409 STYK1Q6J9G0 422 aa20.3■□□□□ 0.84
TPM3-219ENST00000509409 MASTLQ96GX5 879 aa20.3■□□□□ 0.84
TPM3-219ENST00000509409 RRP7AQ9Y3A4 280 aaKnown RBP20.3■□□□□ 0.84
TPM3-219ENST00000509409 NFKBIEO00221 500 aa20.29■□□□□ 0.84
TPM3-219ENST00000509409 GTF2E1P29083 439 aaPredicted RBP20.29■□□□□ 0.84
TPM3-219ENST00000509409 PRELPP51888 382 aa20.29■□□□□ 0.84
TPM3-219ENST00000509409 ZC3H4Q9UPT8 1303 aaKnown RBP20.28■□□□□ 0.84
TPM3-219ENST00000509409 GLTPD2A6NH11 291 aa20.28■□□□□ 0.84
TPM3-219ENST00000509409 SRGNP10124 158 aa20.28■□□□□ 0.84
TPM3-219ENST00000509409 EIF4A1P60842 406 aaKnown RBP20.28■□□□□ 0.84
TPM3-219ENST00000509409 HLFQ16534 295 aa20.28■□□□□ 0.84
TPM3-219ENST00000509409 RIPK4P57078 832 aa20.27■□□□□ 0.84
TPM3-219ENST00000509409 DPY19L2Q6NUT2 758 aa20.27■□□□□ 0.84
TPM3-219ENST00000509409 MYL6BP14649 208 aa20.26■□□□□ 0.83
TPM3-219ENST00000509409 FSTL1Q12841 308 aa20.26■□□□□ 0.83
TPM3-219ENST00000509409 ERFEQ4G0M1 354 aa20.26■□□□□ 0.83
TPM3-219ENST00000509409 PRPF40BQ6NWY9 871 aaKnown RBP20.26■□□□□ 0.83
TPM3-219ENST00000509409 TSPYL4Q9UJ04 414 aa20.26■□□□□ 0.83
TPM3-219ENST00000509409 SCN7AQ01118 1682 aa20.26■□□□□ 0.83
TPM3-219ENST00000509409 RGL2O15211 777 aa20.25■□□□□ 0.83
TPM3-219ENST00000509409 VEGFAP15692 232 aaPredicted RBP20.25■□□□□ 0.83
TPM3-219ENST00000509409 SOGA3Q5TF21 947 aa20.25■□□□□ 0.83
TPM3-219ENST00000509409 KIF6Q6ZMV9 814 aa20.25■□□□□ 0.83
TPM3-219ENST00000509409 NPR1P16066 1061 aa20.24■□□□□ 0.83
TPM3-219ENST00000509409 TAOK3Q9H2K8 898 aa20.24■□□□□ 0.83
TPM3-219ENST00000509409 ERVV-1B6SEH8 477 aa20.23■□□□□ 0.83
TPM3-219ENST00000509409 TTLL7Q6ZT98 887 aa20.22■□□□□ 0.83
TPM3-219ENST00000509409 SMC1BQ8NDV3 1235 aa20.22■□□□□ 0.83
TPM3-219ENST00000509409 NYXQ9GZU5 481 aa20.22■□□□□ 0.83
TPM3-219ENST00000509409 MAP3K15Q6ZN16 1313 aa20.22■□□□□ 0.83
TPM3-219ENST00000509409 EIF2S2P20042 333 aaKnown RBP20.21■□□□□ 0.83
TPM3-219ENST00000509409 TMPOP42166 694 aaKnown RBP20.21■□□□□ 0.83
TPM3-219ENST00000509409 LMOD3Q0VAK6 560 aa20.21■□□□□ 0.83
TPM3-219ENST00000509409 NEUROD2Q15784 382 aa20.21■□□□□ 0.83
TPM3-219ENST00000509409 ZBTB3Q9H5J0 574 aa20.21■□□□□ 0.83
TPM3-219ENST00000509409 SBF1O95248 1867 aa20.21■□□□□ 0.83
TPM3-219ENST00000509409 ANKRD31Q8N7Z5 1873 aa20.2■□□□□ 0.82
TPM3-219ENST00000509409 KLRG2A4D1S0 409 aaPredicted RBP20.2■□□□□ 0.82
TPM3-219ENST00000509409 ALDH1B1P30837 517 aa20.2■□□□□ 0.82
TPM3-219ENST00000509409 CCDC93Q567U6 631 aa20.2■□□□□ 0.82
TPM3-219ENST00000509409 CCDC146Q8IYE0 955 aa20.2■□□□□ 0.82
TPM3-219ENST00000509409 DLEC1Q9Y238 1755 aa20.2■□□□□ 0.82
TPM3-219ENST00000509409 MYBBP1AQ9BQG0 1328 aaKnown RBP20.2■□□□□ 0.82
TPM3-219ENST00000509409 LTBP3Q9NS15 1303 aa20.2■□□□□ 0.82
TPM3-219ENST00000509409 GPTP24298 496 aa20.19■□□□□ 0.82
TPM3-219ENST00000509409 WDR43Q15061 677 aaKnown RBP eCLIP20.19■□□□□ 0.82
TPM3-219ENST00000509409 NUTM1Q86Y26 1132 aa20.19■□□□□ 0.82
TPM3-219ENST00000509409 HTRA3P83110 453 aa20.18■□□□□ 0.82
TPM3-219ENST00000509409 DNAJC5GQ8N7S2 189 aa20.18■□□□□ 0.82
TPM3-219ENST00000509409 C7orf43Q8WVR3 580 aa20.18■□□□□ 0.82
TPM3-219ENST00000509409 BCORQ6W2J9 1755 aa20.17■□□□□ 0.82
TPM3-219ENST00000509409 BABAM1Q9NWV8 329 aa20.17■□□□□ 0.82
TPM3-219ENST00000509409 LAS1LQ9Y4W2 734 aaKnown RBP20.17■□□□□ 0.82
TPM3-219ENST00000509409 RTKN2Q8IZC4 609 aa20.16■□□□□ 0.82
TPM3-219ENST00000509409 ERBB4Q15303 1308 aa20.16■□□□□ 0.82
TPM3-219ENST00000509409 POTECB2RU33 542 aa20.15■□□□□ 0.82
TPM3-219ENST00000509409 DDNO94850 711 aaPredicted RBP20.15■□□□□ 0.82
TPM3-219ENST00000509409 FKBP4Q02790 459 aaKnown RBP eCLIP20.15■□□□□ 0.82
TPM3-219ENST00000509409 SUSD4Q5VX71 490 aa20.15■□□□□ 0.82
TPM3-219ENST00000509409 OLFM4Q6UX06 510 aa20.15■□□□□ 0.82
TPM3-219ENST00000509409 NECTIN2Q92692 538 aa20.15■□□□□ 0.82
TPM3-219ENST00000509409 RUNDC1Q96C34 613 aa20.15■□□□□ 0.82
TPM3-219ENST00000509409 DLG5Q8TDM6 1919 aa20.14■□□□□ 0.81
TPM3-219ENST00000509409 SLX4Q8IY92 1834 aa20.14■□□□□ 0.81
TPM3-219ENST00000509409 COL11A2P13942 1736 aaPredicted RBP20.14■□□□□ 0.81
TPM3-219ENST00000509409 GIGYF2Q6Y7W6 1299 aaKnown RBP20.14■□□□□ 0.81
TPM3-219ENST00000509409 PPP1R42Q7Z4L9 355 aa20.14■□□□□ 0.81
TPM3-219ENST00000509409 RPGRQ92834 1020 aaKnown RBP20.14■□□□□ 0.81
TPM3-219ENST00000509409 ZNF277Q9NRM2 450 aaPredicted RBP20.14■□□□□ 0.81
TPM3-219ENST00000509409 ANXA1P04083 346 aa20.13■□□□□ 0.81
TPM3-219ENST00000509409 ZNF34Q8IZ26 560 aa20.13■□□□□ 0.81
TPM3-219ENST00000509409 UBN2Q6ZU65 1347 aa20.12■□□□□ 0.81
TPM3-219ENST00000509409 AIMP1Q12904 312 aaKnown RBP20.12■□□□□ 0.81
TPM3-219ENST00000509409 PDIA6Q15084 440 aa20.12■□□□□ 0.81
TPM3-219ENST00000509409 SYNE4Q8N205 404 aa20.12■□□□□ 0.81
TPM3-219ENST00000509409 KLRG1Q96E93 195 aa20.12■□□□□ 0.81
TPM3-219ENST00000509409 ADAMTS8Q9UP79 889 aa20.12■□□□□ 0.81
TPM3-219ENST00000509409 TNRC6CQ9HCJ0 1690 aaKnown RBP20.12■□□□□ 0.81
TPM3-219ENST00000509409 KDM3BQ7LBC6 1761 aa20.11■□□□□ 0.81
TPM3-219ENST00000509409 PROSER3Q2NL68 480 aa20.11■□□□□ 0.81
TPM3-219ENST00000509409 CRY2Q49AN0 593 aa20.11■□□□□ 0.81
TPM3-219ENST00000509409 PARP10Q53GL7 1025 aa20.11■□□□□ 0.81
TPM3-219ENST00000509409 RBM17Q96I25 401 aaKnown RBP20.11■□□□□ 0.81
TPM3-219ENST00000509409 ABCC12Q96J65 1359 aa20.1■□□□□ 0.81
TPM3-219ENST00000509409 CCDC88AQ3V6T2 1871 aa20.1■□□□□ 0.81
TPM3-219ENST00000509409 COPS6Q7L5N1 327 aa20.1■□□□□ 0.81
TPM3-219ENST00000509409 CHL1O00533 1208 aa20.09■□□□□ 0.81
TPM3-219ENST00000509409 TCERG1O14776 1098 aaKnown RBP20.09■□□□□ 0.81
TPM3-219ENST00000509409 XAGE3Q8WTP9 111 aa20.09■□□□□ 0.81
TPM3-219ENST00000509409 NLRP3Q96P20 1036 aa20.09■□□□□ 0.81
TPM3-219ENST00000509409 UTP14AQ9BVJ6 771 aaKnown RBP20.09■□□□□ 0.81
TPM3-219ENST00000509409 TRIM35Q9UPQ4 493 aa20.09■□□□□ 0.81
TPM3-219ENST00000509409 FER1L6Q2WGJ9 1857 aa20.09■□□□□ 0.81
TPM3-219ENST00000509409 LAMB4A4D0S4 1761 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms