RNA–Protein interactions for RNA: ENST00000509366.5

GABRB1-203, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

TSL 1 (best)

Gene GABRB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-203ENST00000509366 NBPF26B4DH59 902 aa18.87■□□□□ 0.61
GABRB1-203ENST00000509366 STYK1Q6J9G0 422 aa18.87■□□□□ 0.61
GABRB1-203ENST00000509366 NBPF10Q6P3W6 841 aaKnown RBP18.87■□□□□ 0.61
GABRB1-203ENST00000509366 NBPF15Q8N660 670 aa18.87■□□□□ 0.61
GABRB1-203ENST00000509366 NIP7Q9Y221 180 aaKnown RBP eCLIP18.87■□□□□ 0.61
GABRB1-203ENST00000509366 NFKBIEO00221 500 aa18.86■□□□□ 0.61
GABRB1-203ENST00000509366 C21orf2O43822 256 aa18.86■□□□□ 0.61
GABRB1-203ENST00000509366 TPTE2Q6XPS3 522 aa18.86■□□□□ 0.61
GABRB1-203ENST00000509366 MASTLQ96GX5 879 aa18.86■□□□□ 0.61
GABRB1-203ENST00000509366 RRAGCQ9HB90 399 aa18.86■□□□□ 0.61
GABRB1-203ENST00000509366 ZNF219Q9P2Y4 722 aaPredicted RBP18.86■□□□□ 0.61
GABRB1-203ENST00000509366 LAMB4A4D0S4 1761 aa18.86■□□□□ 0.61
GABRB1-203ENST00000509366 COL11A2P13942 1736 aaPredicted RBP18.86■□□□□ 0.61
GABRB1-203ENST00000509366 TNRC6CQ9HCJ0 1690 aaKnown RBP18.85■□□□□ 0.61
GABRB1-203ENST00000509366 SRGNP10124 158 aa18.85■□□□□ 0.61
GABRB1-203ENST00000509366 SOGA3Q5TF21 947 aa18.85■□□□□ 0.61
GABRB1-203ENST00000509366 KDM3BQ7LBC6 1761 aa18.84■□□□□ 0.61
GABRB1-203ENST00000509366 EIF4A1P60842 406 aaKnown RBP18.84■□□□□ 0.61
GABRB1-203ENST00000509366 FSTL1Q12841 308 aa18.84■□□□□ 0.61
GABRB1-203ENST00000509366 THUMPD2Q9BTF0 503 aaKnown RBP18.84■□□□□ 0.61
GABRB1-203ENST00000509366 GLTPD2A6NH11 291 aa18.83■□□□□ 0.6
GABRB1-203ENST00000509366 GTF2E1P29083 439 aaPredicted RBP18.83■□□□□ 0.6
GABRB1-203ENST00000509366 PRPF40BQ6NWY9 871 aaKnown RBP18.83■□□□□ 0.6
GABRB1-203ENST00000509366 TAOK3Q9H2K8 898 aa18.83■□□□□ 0.6
GABRB1-203ENST00000509366 CCDC88AQ3V6T2 1871 aa18.82■□□□□ 0.6
GABRB1-203ENST00000509366 VEGFAP15692 232 aaPredicted RBP18.82■□□□□ 0.6
GABRB1-203ENST00000509366 NPR1P16066 1061 aa18.82■□□□□ 0.6
GABRB1-203ENST00000509366 PRELPP51888 382 aa18.82■□□□□ 0.6
GABRB1-203ENST00000509366 DDX10Q13206 875 aaKnown RBP18.82■□□□□ 0.6
GABRB1-203ENST00000509366 DPY19L2Q6NUT2 758 aa18.82■□□□□ 0.6
GABRB1-203ENST00000509366 KIF6Q6ZMV9 814 aa18.82■□□□□ 0.6
GABRB1-203ENST00000509366 NGEFQ8N5V2 710 aa18.82■□□□□ 0.6
GABRB1-203ENST00000509366 RRP7AQ9Y3A4 280 aaKnown RBP18.82■□□□□ 0.6
GABRB1-203ENST00000509366 LTBP3Q9NS15 1303 aa18.81■□□□□ 0.6
GABRB1-203ENST00000509366 TIAM2Q8IVF5 1701 aa18.81■□□□□ 0.6
GABRB1-203ENST00000509366 FAM177BA6PVY3 158 aa18.81■□□□□ 0.6
GABRB1-203ENST00000509366 RIPK4P57078 832 aa18.81■□□□□ 0.6
GABRB1-203ENST00000509366 LMOD3Q0VAK6 560 aa18.81■□□□□ 0.6
GABRB1-203ENST00000509366 ERFEQ4G0M1 354 aa18.81■□□□□ 0.6
GABRB1-203ENST00000509366 TSPYL4Q9UJ04 414 aa18.81■□□□□ 0.6
GABRB1-203ENST00000509366 ERVV-1B6SEH8 477 aa18.8■□□□□ 0.6
GABRB1-203ENST00000509366 HLFQ16534 295 aa18.8■□□□□ 0.6
GABRB1-203ENST00000509366 SMC1BQ8NDV3 1235 aa18.8■□□□□ 0.6
GABRB1-203ENST00000509366 NYXQ9GZU5 481 aa18.8■□□□□ 0.6
GABRB1-203ENST00000509366 FER1L6Q2WGJ9 1857 aa18.8■□□□□ 0.6
GABRB1-203ENST00000509366 SLX4Q8IY92 1834 aa18.79■□□□□ 0.6
GABRB1-203ENST00000509366 ERBB4Q15303 1308 aa18.79■□□□□ 0.6
GABRB1-203ENST00000509366 MAP3K15Q6ZN16 1313 aa18.79■□□□□ 0.6
GABRB1-203ENST00000509366 MYBBP1AQ9BQG0 1328 aaKnown RBP18.79■□□□□ 0.6
GABRB1-203ENST00000509366 CACNA1SQ13698 1873 aa18.79■□□□□ 0.6
GABRB1-203ENST00000509366 ARFGEF2Q9Y6D5 1785 aa18.78■□□□□ 0.6
GABRB1-203ENST00000509366 KLRG2A4D1S0 409 aaPredicted RBP18.78■□□□□ 0.6
GABRB1-203ENST00000509366 MYL6BP14649 208 aa18.78■□□□□ 0.6
GABRB1-203ENST00000509366 CCDC93Q567U6 631 aa18.78■□□□□ 0.6
GABRB1-203ENST00000509366 BABAM1Q9NWV8 329 aa18.78■□□□□ 0.6
GABRB1-203ENST00000509366 TMPOP42166 694 aaKnown RBP18.77■□□□□ 0.6
GABRB1-203ENST00000509366 DICER1Q9UPY3 1922 aaKnown RBP18.76■□□□□ 0.59
GABRB1-203ENST00000509366 ALDH1B1P30837 517 aa18.76■□□□□ 0.59
GABRB1-203ENST00000509366 WDR43Q15061 677 aaKnown RBP eCLIP18.76■□□□□ 0.59
GABRB1-203ENST00000509366 TTLL7Q6ZT98 887 aa18.76■□□□□ 0.59
GABRB1-203ENST00000509366 ZBTB3Q9H5J0 574 aa18.75■□□□□ 0.59
GABRB1-203ENST00000509366 WDR90Q96KV7 1748 aa18.74■□□□□ 0.59
GABRB1-203ENST00000509366 NUP98P52948 1817 aa18.74■□□□□ 0.59
GABRB1-203ENST00000509366 GPTP24298 496 aa18.74■□□□□ 0.59
GABRB1-203ENST00000509366 C7orf43Q8WVR3 580 aa18.74■□□□□ 0.59
GABRB1-203ENST00000509366 EIF2S2P20042 333 aaKnown RBP18.73■□□□□ 0.59
GABRB1-203ENST00000509366 NUTM1Q86Y26 1132 aa18.73■□□□□ 0.59
GABRB1-203ENST00000509366 RTKN2Q8IZC4 609 aa18.73■□□□□ 0.59
GABRB1-203ENST00000509366 DNAJC5GQ8N7S2 189 aa18.73■□□□□ 0.59
GABRB1-203ENST00000509366 IBTKQ9P2D0 1353 aaPredicted RBP18.72■□□□□ 0.59
GABRB1-203ENST00000509366 FKBP4Q02790 459 aaKnown RBP eCLIP18.72■□□□□ 0.59
GABRB1-203ENST00000509366 NEUROD2Q15784 382 aa18.72■□□□□ 0.59
GABRB1-203ENST00000509366 CCDC146Q8IYE0 955 aa18.72■□□□□ 0.59
GABRB1-203ENST00000509366 RPGRQ92834 1020 aaKnown RBP18.72■□□□□ 0.59
GABRB1-203ENST00000509366 CRY2Q49AN0 593 aa18.71■□□□□ 0.59
GABRB1-203ENST00000509366 GIGYF2Q6Y7W6 1299 aaKnown RBP18.71■□□□□ 0.59
GABRB1-203ENST00000509366 RUNDC1Q96C34 613 aa18.71■□□□□ 0.59
GABRB1-203ENST00000509366 ABCC12Q96J65 1359 aa18.7■□□□□ 0.58
GABRB1-203ENST00000509366 RIC1Q4ADV7 1423 aa18.7■□□□□ 0.58
GABRB1-203ENST00000509366 PARP10Q53GL7 1025 aa18.7■□□□□ 0.58
GABRB1-203ENST00000509366 CC2D2BQ6DHV5 1058 aa18.7■□□□□ 0.58
GABRB1-203ENST00000509366 PPP1R42Q7Z4L9 355 aa18.7■□□□□ 0.58
GABRB1-203ENST00000509366 ZNF34Q8IZ26 560 aa18.7■□□□□ 0.58
GABRB1-203ENST00000509366 UBN2Q6ZU65 1347 aa18.7■□□□□ 0.58
GABRB1-203ENST00000509366 SUSD4Q5VX71 490 aa18.69■□□□□ 0.58
GABRB1-203ENST00000509366 KLRG1Q96E93 195 aa18.69■□□□□ 0.58
GABRB1-203ENST00000509366 IQCA1LA6NCM1 817 aa18.68■□□□□ 0.58
GABRB1-203ENST00000509366 POTECB2RU33 542 aa18.68■□□□□ 0.58
GABRB1-203ENST00000509366 DDNO94850 711 aaPredicted RBP18.68■□□□□ 0.58
GABRB1-203ENST00000509366 HTRA3P83110 453 aa18.68■□□□□ 0.58
GABRB1-203ENST00000509366 ZNF277Q9NRM2 450 aaPredicted RBP18.68■□□□□ 0.58
GABRB1-203ENST00000509366 LAS1LQ9Y4W2 734 aaKnown RBP18.68■□□□□ 0.58
GABRB1-203ENST00000509366 CHL1O00533 1208 aa18.67■□□□□ 0.58
GABRB1-203ENST00000509366 HOXA10P31260 410 aaPredicted RBP18.67■□□□□ 0.58
GABRB1-203ENST00000509366 PDIA6Q15084 440 aa18.67■□□□□ 0.58
GABRB1-203ENST00000509366 HSP90AB3PQ58FF7 597 aa18.67■□□□□ 0.58
GABRB1-203ENST00000509366 OLFM4Q6UX06 510 aa18.67■□□□□ 0.58
GABRB1-203ENST00000509366 RBM17Q96I25 401 aaKnown RBP18.67■□□□□ 0.58
GABRB1-203ENST00000509366 NTSR2O95665 410 aa18.66■□□□□ 0.58
GABRB1-203ENST00000509366 ANXA1P04083 346 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms