RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 KLRG1Q96E93 195 aa14.49□□□□□ -0.09
RNF4-212ENST00000509258 SLX4Q8IY92 1834 aa14.48□□□□□ -0.09
RNF4-212ENST00000509258 HTATSF1O43719 755 aaKnown RBP14.48□□□□□ -0.09
RNF4-212ENST00000509258 VEGFAP15692 232 aaPredicted RBP14.48□□□□□ -0.09
RNF4-212ENST00000509258 PRELPP51888 382 aa14.48□□□□□ -0.09
RNF4-212ENST00000509258 NFE2L2Q16236 605 aa14.48□□□□□ -0.09
RNF4-212ENST00000509258 CNBD1Q8NA66 436 aa14.48□□□□□ -0.09
RNF4-212ENST00000509258 RTF1Q92541 710 aaKnown RBP14.48□□□□□ -0.09
RNF4-212ENST00000509258 ARFGEF2Q9Y6D5 1785 aa14.47□□□□□ -0.09
RNF4-212ENST00000509258 FER1L6Q2WGJ9 1857 aa14.47□□□□□ -0.09
RNF4-212ENST00000509258 NPHP1O15259 732 aa14.47□□□□□ -0.09
RNF4-212ENST00000509258 HTRA3P83110 453 aa14.47□□□□□ -0.09
RNF4-212ENST00000509258 TAF7Q15545 349 aaPredicted RBP14.47□□□□□ -0.09
RNF4-212ENST00000509258 ZNF622Q969S3 477 aaKnown RBP eCLIP14.47□□□□□ -0.09
RNF4-212ENST00000509258 SETDB2Q96T68 719 aa14.47□□□□□ -0.09
RNF4-212ENST00000509258 SNRPA1P09661 255 aaKnown RBP14.46□□□□□ -0.09
RNF4-212ENST00000509258 ST5P78524 1137 aa14.46□□□□□ -0.09
RNF4-212ENST00000509258 RALBP1Q15311 655 aa14.46□□□□□ -0.09
RNF4-212ENST00000509258 JMYQ8N9B5 988 aa14.46□□□□□ -0.09
RNF4-212ENST00000509258 LTBP3Q9NS15 1303 aa14.45□□□□□ -0.1
RNF4-212ENST00000509258 DICER1Q9UPY3 1922 aaKnown RBP14.45□□□□□ -0.1
RNF4-212ENST00000509258 NEFMP07197 916 aa14.45□□□□□ -0.1
RNF4-212ENST00000509258 DPY19L2Q6NUT2 758 aa14.45□□□□□ -0.1
RNF4-212ENST00000509258 DZIP3Q86Y13 1208 aaKnown RBP14.45□□□□□ -0.1
RNF4-212ENST00000509258 MYBBP1AQ9BQG0 1328 aaKnown RBP14.44□□□□□ -0.1
RNF4-212ENST00000509258 C21orf2O43822 256 aa14.44□□□□□ -0.1
RNF4-212ENST00000509258 ERFEQ4G0M1 354 aa14.44□□□□□ -0.1
RNF4-212ENST00000509258 SOGA3Q5TF21 947 aa14.44□□□□□ -0.1
RNF4-212ENST00000509258 STYK1Q6J9G0 422 aa14.44□□□□□ -0.1
RNF4-212ENST00000509258 CCDC146Q8IYE0 955 aa14.44□□□□□ -0.1
RNF4-212ENST00000509258 CNKSR1Q969H4 720 aa14.44□□□□□ -0.1
RNF4-212ENST00000509258 TAOK3Q9H2K8 898 aa14.44□□□□□ -0.1
RNF4-212ENST00000509258 ZNF652Q9Y2D9 606 aa14.44□□□□□ -0.1
RNF4-212ENST00000509258 EIF4A1P60842 406 aaKnown RBP14.43□□□□□ -0.1
RNF4-212ENST00000509258 PRPF40BQ6NWY9 871 aaKnown RBP14.43□□□□□ -0.1
RNF4-212ENST00000509258 CLEC4GQ6UXB4 293 aa14.43□□□□□ -0.1
RNF4-212ENST00000509258 ZNF219Q9P2Y4 722 aaPredicted RBP14.43□□□□□ -0.1
RNF4-212ENST00000509258 RRP7AQ9Y3A4 280 aaKnown RBP14.43□□□□□ -0.1
RNF4-212ENST00000509258 SRGNP10124 158 aa14.42□□□□□ -0.1
RNF4-212ENST00000509258 HLFQ16534 295 aa14.42□□□□□ -0.1
RNF4-212ENST00000509258 MASTLQ96GX5 879 aa14.42□□□□□ -0.1
RNF4-212ENST00000509258 MAPK8IP3Q9UPT6 1336 aa14.41□□□□□ -0.1
RNF4-212ENST00000509258 PCNTO95613 3336 aa14.41□□□□□ -0.1
RNF4-212ENST00000509258 RGL2O15211 777 aa14.41□□□□□ -0.1
RNF4-212ENST00000509258 TMPOP42166 694 aaKnown RBP14.41□□□□□ -0.1
RNF4-212ENST00000509258 NBPF5PQ86XG9 351 aaPredicted RBP14.41□□□□□ -0.1
RNF4-212ENST00000509258 ANKRD36CQ5JPF3 1778 aa14.4□□□□□ -0.1
RNF4-212ENST00000509258 RIPK4P57078 832 aa14.4□□□□□ -0.1
RNF4-212ENST00000509258 PRKRIP1Q9H875 184 aaPredicted RBP14.4□□□□□ -0.1
RNF4-212ENST00000509258 POTECB2RU33 542 aa14.39□□□□□ -0.11
RNF4-212ENST00000509258 TTLL7Q6ZT98 887 aa14.39□□□□□ -0.11
RNF4-212ENST00000509258 NGEFQ8N5V2 710 aa14.39□□□□□ -0.11
RNF4-212ENST00000509258 TRIM35Q9UPQ4 493 aa14.39□□□□□ -0.11
RNF4-212ENST00000509258 LAMB2P55268 1798 aa14.38□□□□□ -0.11
RNF4-212ENST00000509258 NPR1P16066 1061 aa14.38□□□□□ -0.11
RNF4-212ENST00000509258 KRT24Q2M2I5 525 aa14.38□□□□□ -0.11
RNF4-212ENST00000509258 CCDC93Q567U6 631 aa14.38□□□□□ -0.11
RNF4-212ENST00000509258 LRP10Q7Z4F1 713 aa14.38□□□□□ -0.11
RNF4-212ENST00000509258 ADAMTS8Q9UP79 889 aa14.38□□□□□ -0.11
RNF4-212ENST00000509258 NEUROD2Q15784 382 aa14.37□□□□□ -0.11
RNF4-212ENST00000509258 PROSER3Q2NL68 480 aa14.37□□□□□ -0.11
RNF4-212ENST00000509258 CCDC184Q52MB2 194 aa14.37□□□□□ -0.11
RNF4-212ENST00000509258 TPTE2Q6XPS3 522 aa14.37□□□□□ -0.11
RNF4-212ENST00000509258 PNNQ9H307 717 aaKnown RBP14.37□□□□□ -0.11
RNF4-212ENST00000509258 NIP7Q9Y221 180 aaKnown RBP eCLIP14.37□□□□□ -0.11
RNF4-212ENST00000509258 ABCC12Q96J65 1359 aa14.36□□□□□ -0.11
RNF4-212ENST00000509258 KLRG2A4D1S0 409 aaPredicted RBP14.36□□□□□ -0.11
RNF4-212ENST00000509258 IQCA1LA6NCM1 817 aa14.36□□□□□ -0.11
RNF4-212ENST00000509258 FAM177BA6PVY3 158 aa14.36□□□□□ -0.11
RNF4-212ENST00000509258 ANXA1P04083 346 aa14.36□□□□□ -0.11
RNF4-212ENST00000509258 MYL6BP14649 208 aa14.36□□□□□ -0.11
RNF4-212ENST00000509258 PDIA6Q15084 440 aa14.36□□□□□ -0.11
RNF4-212ENST00000509258 COL13A1Q5TAT6 717 aaPredicted RBP14.36□□□□□ -0.11
RNF4-212ENST00000509258 CHADLQ6NUI6 762 aa14.36□□□□□ -0.11
RNF4-212ENST00000509258 PNISRQ8TF01 805 aaKnown RBP14.36□□□□□ -0.11
RNF4-212ENST00000509258 C7orf43Q8WVR3 580 aa14.36□□□□□ -0.11
RNF4-212ENST00000509258 TSPYL4Q9UJ04 414 aa14.36□□□□□ -0.11
RNF4-212ENST00000509258 TAF1P21675 1872 aa14.35□□□□□ -0.11
RNF4-212ENST00000509258 DDNO94850 711 aaPredicted RBP14.35□□□□□ -0.11
RNF4-212ENST00000509258 SLC51AQ86UW1 340 aa14.35□□□□□ -0.11
RNF4-212ENST00000509258 UBN2Q6ZU65 1347 aa14.35□□□□□ -0.11
RNF4-212ENST00000509258 FKBP4Q02790 459 aaKnown RBP eCLIP14.34□□□□□ -0.11
RNF4-212ENST00000509258 L3MBTL3Q96JM7 780 aaPredicted RBP14.34□□□□□ -0.11
RNF4-212ENST00000509258 CREBZFQ9NS37 354 aa14.34□□□□□ -0.11
RNF4-212ENST00000509258 MAP3K15Q6ZN16 1313 aa14.34□□□□□ -0.11
RNF4-212ENST00000509258 HSPA1AP0DMV8 641 aaKnown RBP14.33□□□□□ -0.12
RNF4-212ENST00000509258 HSPA1BP0DMV9 641 aaKnown RBP14.33□□□□□ -0.12
RNF4-212ENST00000509258 GTF2E1P29083 439 aaPredicted RBP14.33□□□□□ -0.12
RNF4-212ENST00000509258 OLFM4Q6UX06 510 aa14.33□□□□□ -0.12
RNF4-212ENST00000509258 RTKN2Q8IZC4 609 aa14.33□□□□□ -0.12
RNF4-212ENST00000509258 NECTIN2Q92692 538 aa14.33□□□□□ -0.12
RNF4-212ENST00000509258 RUNDC1Q96C34 613 aa14.33□□□□□ -0.12
RNF4-212ENST00000509258 ZBTB3Q9H5J0 574 aa14.33□□□□□ -0.12
RNF4-212ENST00000509258 POTEIP0CG38 1075 aa14.32□□□□□ -0.12
RNF4-212ENST00000509258 POTEJP0CG39 1038 aa14.32□□□□□ -0.12
RNF4-212ENST00000509258 EIF2S2P20042 333 aaKnown RBP14.32□□□□□ -0.12
RNF4-212ENST00000509258 GPTP24298 496 aa14.32□□□□□ -0.12
RNF4-212ENST00000509258 ALDH1B1P30837 517 aa14.32□□□□□ -0.12
RNF4-212ENST00000509258 LDHDQ86WU2 507 aa14.32□□□□□ -0.12
RNF4-212ENST00000509258 NUTM1Q86Y26 1132 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms