RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, humanhuman

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-208ENST00000509177 NFE2L2Q16236 605 aa14.32□□□□□ -0.12
TUSC3-208ENST00000509177 TBC1D9BQ66K14 1250 aa14.32□□□□□ -0.12
TUSC3-208ENST00000509177 C21orf2O43822 256 aa14.31□□□□□ -0.12
TUSC3-208ENST00000509177 IL6STP40189 918 aaPredicted RBP14.31□□□□□ -0.12
TUSC3-208ENST00000509177 DPY19L2Q6NUT2 758 aa14.31□□□□□ -0.12
TUSC3-208ENST00000509177 CCDC24Q8N4L8 307 aa14.31□□□□□ -0.12
TUSC3-208ENST00000509177 ZNF622Q969S3 477 aaKnown RBP eCLIP14.31□□□□□ -0.12
TUSC3-208ENST00000509177 BRIP1Q9BX63 1249 aa14.31□□□□□ -0.12
TUSC3-208ENST00000509177 MIS18AQ9NYP9 233 aa14.31□□□□□ -0.12
TUSC3-208ENST00000509177 ZNF219Q9P2Y4 722 aaPredicted RBP14.31□□□□□ -0.12
TUSC3-208ENST00000509177 TBC1D2BQ9UPU7 963 aa14.31□□□□□ -0.12
TUSC3-208ENST00000509177 COL11A2P13942 1736 aaPredicted RBP14.31□□□□□ -0.12
TUSC3-208ENST00000509177 MYBBP1AQ9BQG0 1328 aaKnown RBP14.31□□□□□ -0.12
TUSC3-208ENST00000509177 FER1L6Q2WGJ9 1857 aa14.3□□□□□ -0.12
TUSC3-208ENST00000509177 ZEB1P37275 1124 aaPredicted RBP14.3□□□□□ -0.12
TUSC3-208ENST00000509177 ERFEQ4G0M1 354 aa14.3□□□□□ -0.12
TUSC3-208ENST00000509177 PRR5LQ6MZQ0 368 aa14.3□□□□□ -0.12
TUSC3-208ENST00000509177 PNISRQ8TF01 805 aaKnown RBP14.3□□□□□ -0.12
TUSC3-208ENST00000509177 PLEKHF1Q96S99 279 aa14.3□□□□□ -0.12
TUSC3-208ENST00000509177 DICER1Q9UPY3 1922 aaKnown RBP14.29□□□□□ -0.12
TUSC3-208ENST00000509177 POTEIP0CG38 1075 aa14.29□□□□□ -0.12
TUSC3-208ENST00000509177 POTEJP0CG39 1038 aa14.29□□□□□ -0.12
TUSC3-208ENST00000509177 PDE6BP35913 854 aa14.29□□□□□ -0.12
TUSC3-208ENST00000509177 WDR43Q15061 677 aaKnown RBP eCLIP14.29□□□□□ -0.12
TUSC3-208ENST00000509177 USP16Q9Y5T5 823 aa14.29□□□□□ -0.12
TUSC3-208ENST00000509177 SCN7AQ01118 1682 aa14.29□□□□□ -0.12
TUSC3-208ENST00000509177 NPHP1O15259 732 aa14.28□□□□□ -0.12
TUSC3-208ENST00000509177 PDZRN3Q9UPQ7 1066 aa14.28□□□□□ -0.12
TUSC3-208ENST00000509177 LTBP3Q9NS15 1303 aa14.27□□□□□ -0.12
TUSC3-208ENST00000509177 PRAMEF22A3QJZ6 481 aa14.27□□□□□ -0.13
TUSC3-208ENST00000509177 PIP4K2AP48426 406 aaPredicted RBP14.27□□□□□ -0.13
TUSC3-208ENST00000509177 RIPK4P57078 832 aa14.27□□□□□ -0.13
TUSC3-208ENST00000509177 CHADLQ6NUI6 762 aa14.27□□□□□ -0.13
TUSC3-208ENST00000509177 THUMPD2Q9BTF0 503 aaKnown RBP14.27□□□□□ -0.13
TUSC3-208ENST00000509177 CREBZFQ9NS37 354 aa14.27□□□□□ -0.13
TUSC3-208ENST00000509177 DDNO94850 711 aaPredicted RBP14.26□□□□□ -0.13
TUSC3-208ENST00000509177 DZIP3Q86Y13 1208 aaKnown RBP14.26□□□□□ -0.13
TUSC3-208ENST00000509177 TAOK3Q9H2K8 898 aa14.26□□□□□ -0.13
TUSC3-208ENST00000509177 MKRN1Q9UHC7 482 aaKnown RBP14.26□□□□□ -0.13
TUSC3-208ENST00000509177 SLX4Q8IY92 1834 aa14.26□□□□□ -0.13
TUSC3-208ENST00000509177 SIPA1L3O60292 1781 aaPredicted RBP14.25□□□□□ -0.13
TUSC3-208ENST00000509177 CAMTA2O94983 1202 aa14.25□□□□□ -0.13
TUSC3-208ENST00000509177 LMOD3Q0VAK6 560 aa14.25□□□□□ -0.13
TUSC3-208ENST00000509177 NEUROD2Q15784 382 aa14.25□□□□□ -0.13
TUSC3-208ENST00000509177 PRPF40BQ6NWY9 871 aaKnown RBP14.25□□□□□ -0.13
TUSC3-208ENST00000509177 CCDC146Q8IYE0 955 aa14.25□□□□□ -0.13
TUSC3-208ENST00000509177 CNBD1Q8NA66 436 aa14.25□□□□□ -0.13
TUSC3-208ENST00000509177 SETDB2Q96T68 719 aa14.25□□□□□ -0.13
TUSC3-208ENST00000509177 SRGNP10124 158 aa14.24□□□□□ -0.13
TUSC3-208ENST00000509177 STYK1Q6J9G0 422 aa14.24□□□□□ -0.13
TUSC3-208ENST00000509177 CNKSR1Q969H4 720 aa14.24□□□□□ -0.13
TUSC3-208ENST00000509177 TSPYL4Q9UJ04 414 aa14.24□□□□□ -0.13
TUSC3-208ENST00000509177 ZNF652Q9Y2D9 606 aa14.24□□□□□ -0.13
TUSC3-208ENST00000509177 CACNA1SQ13698 1873 aa14.23□□□□□ -0.13
TUSC3-208ENST00000509177 PASKQ96RG2 1323 aa14.23□□□□□ -0.13
TUSC3-208ENST00000509177 TMPOP42166 694 aaKnown RBP14.23□□□□□ -0.13
TUSC3-208ENST00000509177 NGEFQ8N5V2 710 aa14.23□□□□□ -0.13
TUSC3-208ENST00000509177 MASTLQ96GX5 879 aa14.23□□□□□ -0.13
TUSC3-208ENST00000509177 PRKRIP1Q9H875 184 aaPredicted RBP14.23□□□□□ -0.13
TUSC3-208ENST00000509177 RRP7AQ9Y3A4 280 aaKnown RBP14.23□□□□□ -0.13
TUSC3-208ENST00000509177 ARFGEF2Q9Y6D5 1785 aa14.22□□□□□ -0.13
TUSC3-208ENST00000509177 FOXN1O15353 648 aa14.22□□□□□ -0.13
TUSC3-208ENST00000509177 EIF4A1P60842 406 aaKnown RBP14.22□□□□□ -0.13
TUSC3-208ENST00000509177 ST5P78524 1137 aa14.22□□□□□ -0.13
TUSC3-208ENST00000509177 C7orf43Q8WVR3 580 aa14.22□□□□□ -0.13
TUSC3-208ENST00000509177 BCORQ6W2J9 1755 aa14.22□□□□□ -0.13
TUSC3-208ENST00000509177 CNTNAP1P78357 1384 aa14.22□□□□□ -0.13
TUSC3-208ENST00000509177 NBPF26B4DH59 902 aa14.21□□□□□ -0.13
TUSC3-208ENST00000509177 SOGA3Q5TF21 947 aa14.21□□□□□ -0.13
TUSC3-208ENST00000509177 NBPF10Q6P3W6 841 aaKnown RBP14.21□□□□□ -0.13
TUSC3-208ENST00000509177 NBPF15Q8N660 670 aa14.21□□□□□ -0.13
TUSC3-208ENST00000509177 RUNDC1Q96C34 613 aa14.21□□□□□ -0.13
TUSC3-208ENST00000509177 L3MBTL3Q96JM7 780 aaPredicted RBP14.21□□□□□ -0.13
TUSC3-208ENST00000509177 IQCA1LA6NCM1 817 aa14.2□□□□□ -0.14
TUSC3-208ENST00000509177 CLEC4GQ6UXB4 293 aa14.2□□□□□ -0.14
TUSC3-208ENST00000509177 LDHDQ86WU2 507 aa14.2□□□□□ -0.14
TUSC3-208ENST00000509177 NBPF5PQ86XG9 351 aaPredicted RBP14.2□□□□□ -0.14
TUSC3-208ENST00000509177 TAF1DQ9H5J8 278 aaPredicted RBP14.2□□□□□ -0.14
TUSC3-208ENST00000509177 ADAMTS8Q9UP79 889 aa14.2□□□□□ -0.14
TUSC3-208ENST00000509177 LAS1LQ9Y4W2 734 aaKnown RBP14.2□□□□□ -0.14
TUSC3-208ENST00000509177 SCN4AP35499 1836 aa14.2□□□□□ -0.14
TUSC3-208ENST00000509177 ITGBL1O95965 494 aaPredicted RBP14.19□□□□□ -0.14
TUSC3-208ENST00000509177 MYL6BP14649 208 aa14.19□□□□□ -0.14
TUSC3-208ENST00000509177 OLFM4Q6UX06 510 aa14.19□□□□□ -0.14
TUSC3-208ENST00000509177 NIP7Q9Y221 180 aaKnown RBP eCLIP14.19□□□□□ -0.14
TUSC3-208ENST00000509177 ZNF541Q9H0D2 1346 aa14.18□□□□□ -0.14
TUSC3-208ENST00000509177 KLRG2A4D1S0 409 aaPredicted RBP14.18□□□□□ -0.14
TUSC3-208ENST00000509177 FAM177BA6PVY3 158 aa14.18□□□□□ -0.14
TUSC3-208ENST00000509177 EIF2S2P20042 333 aaKnown RBP14.18□□□□□ -0.14
TUSC3-208ENST00000509177 GTF2E1P29083 439 aaPredicted RBP14.18□□□□□ -0.14
TUSC3-208ENST00000509177 VEGFBP49765 207 aa14.18□□□□□ -0.14
TUSC3-208ENST00000509177 CCDC93Q567U6 631 aa14.18□□□□□ -0.14
TUSC3-208ENST00000509177 KIF6Q6ZMV9 814 aa14.18□□□□□ -0.14
TUSC3-208ENST00000509177 ZNF277Q9NRM2 450 aaPredicted RBP14.18□□□□□ -0.14
TUSC3-208ENST00000509177 BABAM1Q9NWV8 329 aa14.18□□□□□ -0.14
TUSC3-208ENST00000509177 NPR1P16066 1061 aa14.17□□□□□ -0.14
TUSC3-208ENST00000509177 TPTE2Q6XPS3 522 aa14.17□□□□□ -0.14
TUSC3-208ENST00000509177 DLG5Q8TDM6 1919 aa14.17□□□□□ -0.14
TUSC3-208ENST00000509177 TMEM88BA6NKF7 163 aa14.16□□□□□ -0.14
TUSC3-208ENST00000509177 FKBP4Q02790 459 aaKnown RBP eCLIP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms