RNA–Protein interactions for RNA: ENST00000509085.5

HMGCR-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best)

Gene HMGCR, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-207ENST00000509085 SRGNP10124 158 aa11.76□□□□□ -0.53
HMGCR-207ENST00000509085 CC2D1BQ5T0F9 858 aaKnown RBP11.76□□□□□ -0.53
HMGCR-207ENST00000509085 CHADLQ6NUI6 762 aa11.76□□□□□ -0.53
HMGCR-207ENST00000509085 CLEC4GQ6UXB4 293 aa11.76□□□□□ -0.53
HMGCR-207ENST00000509085 CCER1Q8TC90 406 aaPredicted RBP11.76□□□□□ -0.53
HMGCR-207ENST00000509085 MASTLQ96GX5 879 aa11.76□□□□□ -0.53
HMGCR-207ENST00000509085 TBC1D2BQ9UPU7 963 aa11.76□□□□□ -0.53
HMGCR-207ENST00000509085 ZNF652Q9Y2D9 606 aa11.76□□□□□ -0.53
HMGCR-207ENST00000509085 SLX4Q8IY92 1834 aa11.75□□□□□ -0.53
HMGCR-207ENST00000509085 CAMTA2O94983 1202 aa11.75□□□□□ -0.53
HMGCR-207ENST00000509085 PRPF40BQ6NWY9 871 aaKnown RBP11.75□□□□□ -0.53
HMGCR-207ENST00000509085 DZIP3Q86Y13 1208 aaKnown RBP11.75□□□□□ -0.53
HMGCR-207ENST00000509085 BTBD11A6QL63 1104 aa11.74□□□□□ -0.53
HMGCR-207ENST00000509085 MAPK8IP2Q13387 824 aaPredicted RBP11.74□□□□□ -0.53
HMGCR-207ENST00000509085 CFAP53Q96M91 514 aa11.74□□□□□ -0.53
HMGCR-207ENST00000509085 ZNF219Q9P2Y4 722 aaPredicted RBP11.74□□□□□ -0.53
HMGCR-207ENST00000509085 A1BGP04217 495 aa11.73□□□□□ -0.53
HMGCR-207ENST00000509085 CCDC93Q567U6 631 aa11.73□□□□□ -0.53
HMGCR-207ENST00000509085 L3MBTL3Q96JM7 780 aaPredicted RBP11.73□□□□□ -0.53
HMGCR-207ENST00000509085 NPR1P16066 1061 aa11.72□□□□□ -0.53
HMGCR-207ENST00000509085 LDHDQ86WU2 507 aa11.72□□□□□ -0.53
HMGCR-207ENST00000509085 NBPF5PQ86XG9 351 aaPredicted RBP11.72□□□□□ -0.53
HMGCR-207ENST00000509085 NUDCQ9Y266 331 aa11.72□□□□□ -0.53
HMGCR-207ENST00000509085 CNTNAP1P78357 1384 aa11.71□□□□□ -0.53
HMGCR-207ENST00000509085 CAPN15O75808 1086 aa11.71□□□□□ -0.53
HMGCR-207ENST00000509085 DDNO94850 711 aaPredicted RBP11.71□□□□□ -0.53
HMGCR-207ENST00000509085 SNRPA1P09661 255 aaKnown RBP11.71□□□□□ -0.53
HMGCR-207ENST00000509085 PRKAR2BP31323 418 aa11.71□□□□□ -0.53
HMGCR-207ENST00000509085 FKBP4Q02790 459 aaKnown RBP eCLIP11.71□□□□□ -0.53
HMGCR-207ENST00000509085 TPTE2Q6XPS3 522 aa11.71□□□□□ -0.53
HMGCR-207ENST00000509085 CCDC24Q8N4L8 307 aa11.71□□□□□ -0.53
HMGCR-207ENST00000509085 RTF1Q92541 710 aaKnown RBP11.71□□□□□ -0.53
HMGCR-207ENST00000509085 LAMB4A4D0S4 1761 aa11.7□□□□□ -0.54
HMGCR-207ENST00000509085 PASKQ96RG2 1323 aa11.7□□□□□ -0.54
HMGCR-207ENST00000509085 KLRG2A4D1S0 409 aaPredicted RBP11.7□□□□□ -0.54
HMGCR-207ENST00000509085 RTKN2Q8IZC4 609 aa11.7□□□□□ -0.54
HMGCR-207ENST00000509085 C7orf43Q8WVR3 580 aa11.7□□□□□ -0.54
HMGCR-207ENST00000509085 RSPH6AQ9H0K4 717 aa11.7□□□□□ -0.54
HMGCR-207ENST00000509085 TAF1DQ9H5J8 278 aaPredicted RBP11.7□□□□□ -0.54
HMGCR-207ENST00000509085 USP16Q9Y5T5 823 aa11.7□□□□□ -0.54
HMGCR-207ENST00000509085 HTATSF1O43719 755 aaKnown RBP11.69□□□□□ -0.54
HMGCR-207ENST00000509085 PNMA8AQ86V59 439 aaPredicted RBP11.69□□□□□ -0.54
HMGCR-207ENST00000509085 MKRN1Q9UHC7 482 aaKnown RBP11.69□□□□□ -0.54
HMGCR-207ENST00000509085 ADAMTSL1Q8N6G6 1762 aa11.69□□□□□ -0.54
HMGCR-207ENST00000509085 TMEM88BA6NKF7 163 aa11.68□□□□□ -0.54
HMGCR-207ENST00000509085 POTEIP0CG38 1075 aa11.68□□□□□ -0.54
HMGCR-207ENST00000509085 POTEJP0CG39 1038 aa11.68□□□□□ -0.54
HMGCR-207ENST00000509085 ALDH1B1P30837 517 aa11.68□□□□□ -0.54
HMGCR-207ENST00000509085 AIDAQ96BJ3 306 aa11.68□□□□□ -0.54
HMGCR-207ENST00000509085 PHACTR3Q96KR7 559 aa11.68□□□□□ -0.54
HMGCR-207ENST00000509085 PRDM10Q9NQV6 1147 aa11.68□□□□□ -0.54
HMGCR-207ENST00000509085 HACL1Q9UJ83 578 aa11.68□□□□□ -0.54
HMGCR-207ENST00000509085 NIP7Q9Y221 180 aaKnown RBP eCLIP11.68□□□□□ -0.54
HMGCR-207ENST00000509085 KCNQ3O43525 872 aa11.67□□□□□ -0.54
HMGCR-207ENST00000509085 GRIPAP1Q4V328 841 aa11.67□□□□□ -0.54
HMGCR-207ENST00000509085 CC2D2BQ6DHV5 1058 aa11.67□□□□□ -0.54
HMGCR-207ENST00000509085 NYXQ9GZU5 481 aa11.67□□□□□ -0.54
HMGCR-207ENST00000509085 RIC1Q4ADV7 1423 aa11.67□□□□□ -0.54
HMGCR-207ENST00000509085 U2AF1L5P0DN76 240 aaPredicted RBP11.66□□□□□ -0.54
HMGCR-207ENST00000509085 GTF2E1P29083 439 aaPredicted RBP11.66□□□□□ -0.54
HMGCR-207ENST00000509085 EPHX2P34913 555 aa11.66□□□□□ -0.54
HMGCR-207ENST00000509085 IARSP41252 1262 aaKnown RBP11.66□□□□□ -0.54
HMGCR-207ENST00000509085 U2AF1Q01081 240 aaKnown RBP eCLIP11.66□□□□□ -0.54
HMGCR-207ENST00000509085 GPC2Q8N158 579 aa11.66□□□□□ -0.54
HMGCR-207ENST00000509085 PSMD1Q99460 953 aa11.66□□□□□ -0.54
HMGCR-207ENST00000509085 ZNF277Q9NRM2 450 aaPredicted RBP11.66□□□□□ -0.54
HMGCR-207ENST00000509085 IBTKQ9P2D0 1353 aaPredicted RBP11.66□□□□□ -0.54
HMGCR-207ENST00000509085 ZNF541Q9H0D2 1346 aa11.65□□□□□ -0.54
HMGCR-207ENST00000509085 NBPF26B4DH59 902 aa11.65□□□□□ -0.54
HMGCR-207ENST00000509085 FZD9O00144 591 aa11.65□□□□□ -0.54
HMGCR-207ENST00000509085 ITGBL1O95965 494 aaPredicted RBP11.65□□□□□ -0.54
HMGCR-207ENST00000509085 PIP4K2AP48426 406 aaPredicted RBP11.65□□□□□ -0.54
HMGCR-207ENST00000509085 CTCFP49711 727 aaPredicted RBP11.65□□□□□ -0.54
HMGCR-207ENST00000509085 EAPPQ56P03 285 aaPredicted RBP11.65□□□□□ -0.54
HMGCR-207ENST00000509085 NBPF10Q6P3W6 841 aaKnown RBP11.65□□□□□ -0.54
HMGCR-207ENST00000509085 MCM10Q7L590 875 aa11.65□□□□□ -0.54
HMGCR-207ENST00000509085 NBPF15Q8N660 670 aa11.65□□□□□ -0.54
HMGCR-207ENST00000509085 PNISRQ8TF01 805 aaKnown RBP11.65□□□□□ -0.54
HMGCR-207ENST00000509085 JDP2Q8WYK2 163 aa11.65□□□□□ -0.54
HMGCR-207ENST00000509085 KDM3BQ7LBC6 1761 aa11.64□□□□□ -0.55
HMGCR-207ENST00000509085 SNED1Q8TER0 1413 aa11.64□□□□□ -0.55
HMGCR-207ENST00000509085 PRAMEF22A3QJZ6 481 aa11.64□□□□□ -0.55
HMGCR-207ENST00000509085 ERVV-1B6SEH8 477 aa11.64□□□□□ -0.55
HMGCR-207ENST00000509085 FOXN1O15353 648 aa11.64□□□□□ -0.55
HMGCR-207ENST00000509085 NEFMP07197 916 aa11.64□□□□□ -0.55
HMGCR-207ENST00000509085 CNGB1Q14028 1251 aaPredicted RBP11.64□□□□□ -0.55
HMGCR-207ENST00000509085 TAF7Q15545 349 aaPredicted RBP11.64□□□□□ -0.55
HMGCR-207ENST00000509085 CRY2Q49AN0 593 aa11.64□□□□□ -0.55
HMGCR-207ENST00000509085 CLEC11AQ9Y240 323 aa11.64□□□□□ -0.55
HMGCR-207ENST00000509085 NUP98P52948 1817 aa11.64□□□□□ -0.55
HMGCR-207ENST00000509085 RASSF10A6NK89 507 aa11.63□□□□□ -0.55
HMGCR-207ENST00000509085 VEGFBP49765 207 aa11.63□□□□□ -0.55
HMGCR-207ENST00000509085 SYNE4Q8N205 404 aa11.63□□□□□ -0.55
HMGCR-207ENST00000509085 RNF123Q5XPI4 1314 aa11.62□□□□□ -0.55
HMGCR-207ENST00000509085 THSD7BQ9C0I4 1608 aa11.62□□□□□ -0.55
HMGCR-207ENST00000509085 LMOD1P29536 600 aaPredicted RBP11.62□□□□□ -0.55
HMGCR-207ENST00000509085 PPP2R1AP30153 589 aa11.62□□□□□ -0.55
HMGCR-207ENST00000509085 EIF6P56537 245 aaKnown RBP11.62□□□□□ -0.55
HMGCR-207ENST00000509085 MAP2K1Q02750 393 aaPredicted RBP11.62□□□□□ -0.55
HMGCR-207ENST00000509085 KIF6Q6ZMV9 814 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms