RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 DDX19BQ9UMR2 479 aa13.15□□□□□ -0.3
RFC1-211ENST00000509084 GTF3C3Q9Y5Q9 886 aa13.15□□□□□ -0.3
RFC1-211ENST00000509084 ATP10DQ9P241 1426 aa13.14□□□□□ -0.31
RFC1-211ENST00000509084 NBPF26B4DH59 902 aa13.14□□□□□ -0.31
RFC1-211ENST00000509084 APBA3O96018 575 aa13.14□□□□□ -0.31
RFC1-211ENST00000509084 RLBP1P12271 317 aa13.14□□□□□ -0.31
RFC1-211ENST00000509084 NBPF14Q5TI25 921 aa13.14□□□□□ -0.31
RFC1-211ENST00000509084 INTS3Q68E01 1043 aaKnown RBP13.14□□□□□ -0.31
RFC1-211ENST00000509084 NBPF10Q6P3W6 841 aaKnown RBP13.14□□□□□ -0.31
RFC1-211ENST00000509084 KSR2Q6VAB6 950 aa13.14□□□□□ -0.31
RFC1-211ENST00000509084 COPS6Q7L5N1 327 aa13.14□□□□□ -0.31
RFC1-211ENST00000509084 ITPRIPQ8IWB1 547 aa13.14□□□□□ -0.31
RFC1-211ENST00000509084 REM2Q8IYK8 340 aaPredicted RBP13.14□□□□□ -0.31
RFC1-211ENST00000509084 TMEM57Q8N5G2 664 aa13.14□□□□□ -0.31
RFC1-211ENST00000509084 NBPF15Q8N660 670 aa13.14□□□□□ -0.31
RFC1-211ENST00000509084 DNAAF4Q8WXU2 420 aa13.14□□□□□ -0.31
RFC1-211ENST00000509084 CRBNQ96SW2 442 aa13.14□□□□□ -0.31
RFC1-211ENST00000509084 ZBTB1Q9Y2K1 713 aa13.14□□□□□ -0.31
RFC1-211ENST00000509084 COG6Q9Y2V7 657 aa13.14□□□□□ -0.31
RFC1-211ENST00000509084 C4BP0C0L5 1744 aa13.13□□□□□ -0.31
RFC1-211ENST00000509084 ADCY9O60503 1353 aa13.13□□□□□ -0.31
RFC1-211ENST00000509084 IBTKQ9P2D0 1353 aaPredicted RBP13.13□□□□□ -0.31
RFC1-211ENST00000509084 PI4KAP2A4QPH2 592 aa13.13□□□□□ -0.31
RFC1-211ENST00000509084 AIMP1Q12904 312 aaKnown RBP13.13□□□□□ -0.31
RFC1-211ENST00000509084 SF3B2Q13435 895 aaKnown RBP13.13□□□□□ -0.31
RFC1-211ENST00000509084 KIF6Q6ZMV9 814 aa13.13□□□□□ -0.31
RFC1-211ENST00000509084 RIC3Q7Z5B4 369 aa13.13□□□□□ -0.31
RFC1-211ENST00000509084 PI4KAP1Q8N8J0 262 aa13.13□□□□□ -0.31
RFC1-211ENST00000509084 LINC00116Q8NCU8 138 aa13.13□□□□□ -0.31
RFC1-211ENST00000509084 PLBD2Q8NHP8 589 aa13.13□□□□□ -0.31
RFC1-211ENST00000509084 TNNQ9UQP3 1299 aa13.13□□□□□ -0.31
RFC1-211ENST00000509084 ARFGEF2Q9Y6D5 1785 aa13.12□□□□□ -0.31
RFC1-211ENST00000509084 A0A087WZG4 1122 aa13.12□□□□□ -0.31
RFC1-211ENST00000509084 NEXNQ0ZGT2 675 aa13.12□□□□□ -0.31
RFC1-211ENST00000509084 INTS5Q6P9B9 1019 aaKnown RBP13.12□□□□□ -0.31
RFC1-211ENST00000509084 SLC4A10Q6U841 1118 aa13.12□□□□□ -0.31
RFC1-211ENST00000509084 ANKRD13DQ6ZTN6 518 aa13.12□□□□□ -0.31
RFC1-211ENST00000509084 NUP188Q5SRE5 1749 aa13.12□□□□□ -0.31
RFC1-211ENST00000509084 COL15A1P39059 1388 aa13.11□□□□□ -0.31
RFC1-211ENST00000509084 ALDH1L1O75891 902 aa13.11□□□□□ -0.31
RFC1-211ENST00000509084 BAG6P46379 1132 aa13.11□□□□□ -0.31
RFC1-211ENST00000509084 PIP4K2AP48426 406 aaPredicted RBP13.11□□□□□ -0.31
RFC1-211ENST00000509084 EIF5P55010 431 aaKnown RBP13.11□□□□□ -0.31
RFC1-211ENST00000509084 TXNRD1Q16881 649 aa13.11□□□□□ -0.31
RFC1-211ENST00000509084 CCDC125Q86Z20 511 aa13.11□□□□□ -0.31
RFC1-211ENST00000509084 EXOC6Q8TAG9 804 aa13.11□□□□□ -0.31
RFC1-211ENST00000509084 SRCIN1Q9C0H9 1055 aa13.11□□□□□ -0.31
RFC1-211ENST00000509084 MAP3K2Q9Y2U5 619 aa13.11□□□□□ -0.31
RFC1-211ENST00000509084 ZNF330Q9Y3S2 320 aaPredicted RBP13.11□□□□□ -0.31
RFC1-211ENST00000509084 F6X3S4 739 aa13.1□□□□□ -0.31
RFC1-211ENST00000509084 RGL2O15211 777 aa13.1□□□□□ -0.31
RFC1-211ENST00000509084 RPS6KA4O75676 772 aa13.1□□□□□ -0.31
RFC1-211ENST00000509084 HSP90AB3PQ58FF7 597 aa13.1□□□□□ -0.31
RFC1-211ENST00000509084 LINS1Q8NG48 757 aa13.1□□□□□ -0.31
RFC1-211ENST00000509084 AK7Q96M32 723 aa13.1□□□□□ -0.31
RFC1-211ENST00000509084 METTL22Q9BUU2 404 aaPredicted RBP13.1□□□□□ -0.31
RFC1-211ENST00000509084 SSUH2Q9Y2M2 353 aa13.1□□□□□ -0.31
RFC1-211ENST00000509084 MYH14Q7Z406 1995 aaKnown RBP13.1□□□□□ -0.31
RFC1-211ENST00000509084 MAP3K15Q6ZN16 1313 aa13.1□□□□□ -0.31
RFC1-211ENST00000509084 ERVV-1B6SEH8 477 aa13.09□□□□□ -0.31
RFC1-211ENST00000509084 BEND3Q5T5X7 828 aa13.09□□□□□ -0.31
RFC1-211ENST00000509084 CHRDL2Q6WN34 429 aa13.09□□□□□ -0.31
RFC1-211ENST00000509084 DZIP3Q86Y13 1208 aaKnown RBP13.09□□□□□ -0.31
RFC1-211ENST00000509084 PPP4R2Q9NY27 417 aa13.09□□□□□ -0.31
RFC1-211ENST00000509084 RTCBQ9Y3I0 505 aaKnown RBP13.09□□□□□ -0.31
RFC1-211ENST00000509084 BCORQ6W2J9 1755 aa13.09□□□□□ -0.31
RFC1-211ENST00000509084 GNPATO15228 680 aa13.08□□□□□ -0.32
RFC1-211ENST00000509084 GNAI3P08754 354 aa13.08□□□□□ -0.32
RFC1-211ENST00000509084 TTLL7Q6ZT98 887 aa13.08□□□□□ -0.32
RFC1-211ENST00000509084 LRRC4BQ9NT99 713 aa13.08□□□□□ -0.32
RFC1-211ENST00000509084 HDAC5Q9UQL6 1122 aa13.08□□□□□ -0.32
RFC1-211ENST00000509084 SCN7AQ01118 1682 aa13.08□□□□□ -0.32
RFC1-211ENST00000509084 ANKRD36CQ5JPF3 1778 aa13.07□□□□□ -0.32
RFC1-211ENST00000509084 KCNQ4P56696 695 aa13.07□□□□□ -0.32
RFC1-211ENST00000509084 GIGYF2Q6Y7W6 1299 aaKnown RBP13.07□□□□□ -0.32
RFC1-211ENST00000509084 MYD88Q99836 296 aa13.07□□□□□ -0.32
RFC1-211ENST00000509084 ZBTB3Q9H5J0 574 aa13.07□□□□□ -0.32
RFC1-211ENST00000509084 ZNF652Q9Y2D9 606 aa13.07□□□□□ -0.32
RFC1-211ENST00000509084 UBR3Q6ZT12 1888 aa13.06□□□□□ -0.32
RFC1-211ENST00000509084 ZBTB7BO15156 539 aaPredicted RBP13.06□□□□□ -0.32
RFC1-211ENST00000509084 SSFA2P28290 1259 aa13.06□□□□□ -0.32
RFC1-211ENST00000509084 TCIRG1Q13488 830 aa13.06□□□□□ -0.32
RFC1-211ENST00000509084 ARXQ96QS3 562 aa13.06□□□□□ -0.32
RFC1-211ENST00000509084 ZBTB40Q9NUA8 1239 aa13.06□□□□□ -0.32
RFC1-211ENST00000509084 AFDNP55196 1824 aaKnown RBP13.05□□□□□ -0.32
RFC1-211ENST00000509084 NEURL1BA8MQ27 555 aa13.05□□□□□ -0.32
RFC1-211ENST00000509084 CLEC4GQ6UXB4 293 aa13.05□□□□□ -0.32
RFC1-211ENST00000509084 PROM2Q8N271 834 aa13.05□□□□□ -0.32
RFC1-211ENST00000509084 FLAD1Q8NFF5 587 aa13.05□□□□□ -0.32
RFC1-211ENST00000509084 CAMTA2O94983 1202 aa13.04□□□□□ -0.32
RFC1-211ENST00000509084 UBTFL1P0CB47 393 aaPredicted RBP13.04□□□□□ -0.32
RFC1-211ENST00000509084 TRIM28Q13263 835 aaKnown RBP13.04□□□□□ -0.32
RFC1-211ENST00000509084 TRAPPC3LQ5T215 181 aa13.04□□□□□ -0.32
RFC1-211ENST00000509084 CCDC191Q8NCU4 936 aa13.04□□□□□ -0.32
RFC1-211ENST00000509084 CCDC136Q96JN2 1154 aa13.04□□□□□ -0.32
RFC1-211ENST00000509084 CAMKK2Q96RR4 588 aa13.04□□□□□ -0.32
RFC1-211ENST00000509084 NARFQ9UHQ1 456 aa13.04□□□□□ -0.32
RFC1-211ENST00000509084 TBC1D2BQ9UPU7 963 aa13.04□□□□□ -0.32
RFC1-211ENST00000509084 C4AP0C0L4 1744 aa13.04□□□□□ -0.32
RFC1-211ENST00000509084 NUP98P52948 1817 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms