RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 A1BGP04217 495 aa13.4□□□□□ -0.26
SH3D21-206ENST00000508854 HSPA1AP0DMV8 641 aaKnown RBP13.4□□□□□ -0.26
SH3D21-206ENST00000508854 HSPA1BP0DMV9 641 aaKnown RBP13.4□□□□□ -0.26
SH3D21-206ENST00000508854 RTF1Q92541 710 aaKnown RBP13.4□□□□□ -0.26
SH3D21-206ENST00000508854 CREBZFQ9NS37 354 aa13.4□□□□□ -0.26
SH3D21-206ENST00000508854 CEMIPQ8WUJ3 1361 aa13.4□□□□□ -0.26
SH3D21-206ENST00000508854 ANKRD31Q8N7Z5 1873 aa13.4□□□□□ -0.26
SH3D21-206ENST00000508854 PRPF40BQ6NWY9 871 aaKnown RBP13.39□□□□□ -0.27
SH3D21-206ENST00000508854 TPTE2Q6XPS3 522 aa13.39□□□□□ -0.27
SH3D21-206ENST00000508854 NBPF5PQ86XG9 351 aaPredicted RBP13.39□□□□□ -0.27
SH3D21-206ENST00000508854 SIPA1L3O60292 1781 aaPredicted RBP13.39□□□□□ -0.27
SH3D21-206ENST00000508854 COL3A1P02461 1466 aaPredicted RBP13.38□□□□□ -0.27
SH3D21-206ENST00000508854 SNRPA1P09661 255 aaKnown RBP13.38□□□□□ -0.27
SH3D21-206ENST00000508854 NPR1P16066 1061 aa13.38□□□□□ -0.27
SH3D21-206ENST00000508854 CCDC93Q567U6 631 aa13.38□□□□□ -0.27
SH3D21-206ENST00000508854 CCDC24Q8N4L8 307 aa13.38□□□□□ -0.27
SH3D21-206ENST00000508854 DDNO94850 711 aaPredicted RBP13.37□□□□□ -0.27
SH3D21-206ENST00000508854 PRKAR2BP31323 418 aa13.37□□□□□ -0.27
SH3D21-206ENST00000508854 LDHDQ86WU2 507 aa13.37□□□□□ -0.27
SH3D21-206ENST00000508854 RTKN2Q8IZC4 609 aa13.37□□□□□ -0.27
SH3D21-206ENST00000508854 HTATSF1O43719 755 aaKnown RBP13.36□□□□□ -0.27
SH3D21-206ENST00000508854 CAPN15O75808 1086 aa13.36□□□□□ -0.27
SH3D21-206ENST00000508854 ALDH1B1P30837 517 aa13.36□□□□□ -0.27
SH3D21-206ENST00000508854 L3MBTL3Q96JM7 780 aaPredicted RBP13.36□□□□□ -0.27
SH3D21-206ENST00000508854 RSPH6AQ9H0K4 717 aa13.36□□□□□ -0.27
SH3D21-206ENST00000508854 USP16Q9Y5T5 823 aa13.36□□□□□ -0.27
SH3D21-206ENST00000508854 COL11A2P13942 1736 aaPredicted RBP13.36□□□□□ -0.27
SH3D21-206ENST00000508854 SLX4Q8IY92 1834 aa13.35□□□□□ -0.27
SH3D21-206ENST00000508854 FKBP4Q02790 459 aaKnown RBP eCLIP13.35□□□□□ -0.27
SH3D21-206ENST00000508854 CNGB1Q14028 1251 aaPredicted RBP13.35□□□□□ -0.27
SH3D21-206ENST00000508854 PHACTR3Q96KR7 559 aa13.35□□□□□ -0.27
SH3D21-206ENST00000508854 ARFGEF2Q9Y6D5 1785 aa13.35□□□□□ -0.27
SH3D21-206ENST00000508854 SCN4AP35499 1836 aa13.34□□□□□ -0.27
SH3D21-206ENST00000508854 KLRG2A4D1S0 409 aaPredicted RBP13.34□□□□□ -0.27
SH3D21-206ENST00000508854 KCNQ3O43525 872 aa13.34□□□□□ -0.27
SH3D21-206ENST00000508854 NEFMP07197 916 aa13.34□□□□□ -0.27
SH3D21-206ENST00000508854 U2AF1L5P0DN76 240 aaPredicted RBP13.34□□□□□ -0.27
SH3D21-206ENST00000508854 GTF2E1P29083 439 aaPredicted RBP13.34□□□□□ -0.27
SH3D21-206ENST00000508854 U2AF1Q01081 240 aaKnown RBP eCLIP13.34□□□□□ -0.27
SH3D21-206ENST00000508854 C7orf43Q8WVR3 580 aa13.34□□□□□ -0.27
SH3D21-206ENST00000508854 TAF1DQ9H5J8 278 aaPredicted RBP13.34□□□□□ -0.27
SH3D21-206ENST00000508854 NIP7Q9Y221 180 aaKnown RBP eCLIP13.34□□□□□ -0.27
SH3D21-206ENST00000508854 BCORQ6W2J9 1755 aa13.34□□□□□ -0.27
SH3D21-206ENST00000508854 PNMA8AQ86V59 439 aaPredicted RBP13.33□□□□□ -0.28
SH3D21-206ENST00000508854 AIDAQ96BJ3 306 aa13.33□□□□□ -0.28
SH3D21-206ENST00000508854 NYXQ9GZU5 481 aa13.33□□□□□ -0.28
SH3D21-206ENST00000508854 MKRN1Q9UHC7 482 aaKnown RBP13.33□□□□□ -0.28
SH3D21-206ENST00000508854 HACL1Q9UJ83 578 aa13.33□□□□□ -0.28
SH3D21-206ENST00000508854 CACNA1SQ13698 1873 aa13.32□□□□□ -0.28
SH3D21-206ENST00000508854 TMEM88BA6NKF7 163 aa13.32□□□□□ -0.28
SH3D21-206ENST00000508854 TAF7Q15545 349 aaPredicted RBP13.32□□□□□ -0.28
SH3D21-206ENST00000508854 GRIPAP1Q4V328 841 aa13.32□□□□□ -0.28
SH3D21-206ENST00000508854 CC2D2BQ6DHV5 1058 aa13.32□□□□□ -0.28
SH3D21-206ENST00000508854 PNISRQ8TF01 805 aaKnown RBP13.32□□□□□ -0.28
SH3D21-206ENST00000508854 CLEC11AQ9Y240 323 aa13.32□□□□□ -0.28
SH3D21-206ENST00000508854 CNTNAP1P78357 1384 aa13.32□□□□□ -0.28
SH3D21-206ENST00000508854 EAPPQ56P03 285 aaPredicted RBP13.31□□□□□ -0.28
SH3D21-206ENST00000508854 MCM10Q7L590 875 aa13.31□□□□□ -0.28
SH3D21-206ENST00000508854 JDP2Q8WYK2 163 aa13.31□□□□□ -0.28
SH3D21-206ENST00000508854 PRDM10Q9NQV6 1147 aa13.31□□□□□ -0.28
SH3D21-206ENST00000508854 PASKQ96RG2 1323 aa13.31□□□□□ -0.28
SH3D21-206ENST00000508854 POTEIP0CG38 1075 aa13.3□□□□□ -0.28
SH3D21-206ENST00000508854 POTEJP0CG39 1038 aa13.3□□□□□ -0.28
SH3D21-206ENST00000508854 EPHX2P34913 555 aa13.3□□□□□ -0.28
SH3D21-206ENST00000508854 PIP4K2AP48426 406 aaPredicted RBP13.3□□□□□ -0.28
SH3D21-206ENST00000508854 ZNF277Q9NRM2 450 aaPredicted RBP13.3□□□□□ -0.28
SH3D21-206ENST00000508854 PRAMEF22A3QJZ6 481 aa13.29□□□□□ -0.28
SH3D21-206ENST00000508854 NBPF26B4DH59 902 aa13.29□□□□□ -0.28
SH3D21-206ENST00000508854 ERVV-1B6SEH8 477 aa13.29□□□□□ -0.28
SH3D21-206ENST00000508854 IARSP41252 1262 aaKnown RBP13.29□□□□□ -0.28
SH3D21-206ENST00000508854 CTCFP49711 727 aaPredicted RBP13.29□□□□□ -0.28
SH3D21-206ENST00000508854 NBPF10Q6P3W6 841 aaKnown RBP13.29□□□□□ -0.28
SH3D21-206ENST00000508854 GPC2Q8N158 579 aa13.29□□□□□ -0.28
SH3D21-206ENST00000508854 SYNE4Q8N205 404 aa13.29□□□□□ -0.28
SH3D21-206ENST00000508854 NBPF15Q8N660 670 aa13.29□□□□□ -0.28
SH3D21-206ENST00000508854 PSMD1Q99460 953 aa13.29□□□□□ -0.28
SH3D21-206ENST00000508854 FAM177BA6PVY3 158 aa13.28□□□□□ -0.28
SH3D21-206ENST00000508854 FZD9O00144 591 aa13.28□□□□□ -0.28
SH3D21-206ENST00000508854 ITGBL1O95965 494 aaPredicted RBP13.28□□□□□ -0.28
SH3D21-206ENST00000508854 PPP2R1AP30153 589 aa13.28□□□□□ -0.28
SH3D21-206ENST00000508854 EIF6P56537 245 aaKnown RBP13.28□□□□□ -0.28
SH3D21-206ENST00000508854 KIF6Q6ZMV9 814 aa13.28□□□□□ -0.28
SH3D21-206ENST00000508854 TMX4Q9H1E5 349 aaPredicted RBP13.28□□□□□ -0.28
SH3D21-206ENST00000508854 LMOD1P29536 600 aaPredicted RBP13.27□□□□□ -0.29
SH3D21-206ENST00000508854 CRY2Q49AN0 593 aa13.27□□□□□ -0.29
SH3D21-206ENST00000508854 CNTROBQ8N137 903 aa13.27□□□□□ -0.29
SH3D21-206ENST00000508854 RPGRQ92834 1020 aaKnown RBP13.27□□□□□ -0.29
SH3D21-206ENST00000508854 PNNQ9H307 717 aaKnown RBP13.27□□□□□ -0.29
SH3D21-206ENST00000508854 ZNF541Q9H0D2 1346 aa13.27□□□□□ -0.29
SH3D21-206ENST00000508854 FOXN1O15353 648 aa13.26□□□□□ -0.29
SH3D21-206ENST00000508854 VEGFBP49765 207 aa13.26□□□□□ -0.29
SH3D21-206ENST00000508854 DCTN1Q14203 1278 aa13.26□□□□□ -0.29
SH3D21-206ENST00000508854 HLFQ16534 295 aa13.26□□□□□ -0.29
SH3D21-206ENST00000508854 DEFB115Q30KQ5 88 aa13.26□□□□□ -0.29
SH3D21-206ENST00000508854 MAP3K15Q6ZN16 1313 aa13.25□□□□□ -0.29
SH3D21-206ENST00000508854 RASSF10A6NK89 507 aa13.25□□□□□ -0.29
SH3D21-206ENST00000508854 HOXA10P31260 410 aaPredicted RBP13.25□□□□□ -0.29
SH3D21-206ENST00000508854 MAP2K1Q02750 393 aaPredicted RBP13.25□□□□□ -0.29
SH3D21-206ENST00000508854 RBM17Q96I25 401 aaKnown RBP13.25□□□□□ -0.29
SH3D21-206ENST00000508854 IBTKQ9P2D0 1353 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 1479.5 ms