RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 ACSBG1Q96GR2 724 aa12.23□□□□□ -0.45
COL4A3BP-206ENST00000508809 PUS7Q96PZ0 661 aaKnown RBP12.23□□□□□ -0.45
COL4A3BP-206ENST00000508809 BTAF1O14981 1849 aa12.23□□□□□ -0.45
COL4A3BP-206ENST00000508809 ZNF784Q8NCA9 323 aaPredicted RBP12.22□□□□□ -0.45
COL4A3BP-206ENST00000508809 ANKRD24Q8TF21 1146 aa12.22□□□□□ -0.45
COL4A3BP-206ENST00000508809 SLC12A5Q9H2X9 1139 aa12.22□□□□□ -0.45
COL4A3BP-206ENST00000508809 PAPPAQ13219 1627 aa12.22□□□□□ -0.45
COL4A3BP-206ENST00000508809 MAP3K5Q99683 1374 aa12.21□□□□□ -0.45
COL4A3BP-206ENST00000508809 IP6K1Q92551 441 aa12.21□□□□□ -0.45
COL4A3BP-206ENST00000508809 ARXQ96QS3 562 aa12.21□□□□□ -0.45
COL4A3BP-206ENST00000508809 LRRC4BQ9NT99 713 aa12.21□□□□□ -0.45
COL4A3BP-206ENST00000508809 EDC4Q6P2E9 1401 aaKnown RBP12.2□□□□□ -0.46
COL4A3BP-206ENST00000508809 KMT5BQ4FZB7 885 aa12.2□□□□□ -0.46
COL4A3BP-206ENST00000508809 HDGFL2Q7Z4V5 671 aaPredicted RBP12.2□□□□□ -0.46
COL4A3BP-206ENST00000508809 SULF1Q8IWU6 871 aa12.2□□□□□ -0.46
COL4A3BP-206ENST00000508809 TMC1Q8TDI8 760 aa12.2□□□□□ -0.46
COL4A3BP-206ENST00000508809 CARD11Q9BXL7 1154 aa12.2□□□□□ -0.46
COL4A3BP-206ENST00000508809 DAXXQ9UER7 740 aaPredicted RBP12.2□□□□□ -0.46
COL4A3BP-206ENST00000508809 ZNF827Q17R98 1081 aa12.19□□□□□ -0.46
COL4A3BP-206ENST00000508809 SLC27A3Q5K4L6 730 aa12.19□□□□□ -0.46
COL4A3BP-206ENST00000508809 SLC16A10Q8TF71 515 aa12.19□□□□□ -0.46
COL4A3BP-206ENST00000508809 CCDC102AQ96A19 550 aa12.19□□□□□ -0.46
COL4A3BP-206ENST00000508809 TERF2IPQ9NYB0 399 aa12.19□□□□□ -0.46
COL4A3BP-206ENST00000508809 COL24A1Q17RW2 1714 aa12.18□□□□□ -0.46
COL4A3BP-206ENST00000508809 ZMYND10O75800 440 aa12.18□□□□□ -0.46
COL4A3BP-206ENST00000508809 QSER1Q2KHR3 1735 aa12.17□□□□□ -0.46
COL4A3BP-206ENST00000508809 A0A1W2PP64 1363 aa12.17□□□□□ -0.46
COL4A3BP-206ENST00000508809 DDX54Q8TDD1 881 aaKnown RBP12.16□□□□□ -0.46
COL4A3BP-206ENST00000508809 RDH13Q8NBN7 331 aa12.15□□□□□ -0.46
COL4A3BP-206ENST00000508809 FAM208AQ9UK61 1670 aaKnown RBP12.15□□□□□ -0.46
COL4A3BP-206ENST00000508809 PNPLA7Q6ZV29 1317 aa12.14□□□□□ -0.47
COL4A3BP-206ENST00000508809 ITGBL1O95965 494 aaPredicted RBP12.14□□□□□ -0.47
COL4A3BP-206ENST00000508809 CFHP08603 1231 aa12.14□□□□□ -0.47
COL4A3BP-206ENST00000508809 APLP1P51693 650 aa12.14□□□□□ -0.47
COL4A3BP-206ENST00000508809 KCNC4Q03721 635 aa12.14□□□□□ -0.47
COL4A3BP-206ENST00000508809 TESK2Q96S53 571 aa12.14□□□□□ -0.47
COL4A3BP-206ENST00000508809 ANKRD36BQ8N2N9 1353 aa12.14□□□□□ -0.47
COL4A3BP-206ENST00000508809 MAP3K19Q56UN5 1328 aa12.13□□□□□ -0.47
COL4A3BP-206ENST00000508809 DDX11L8A8MPP1 907 aa12.13□□□□□ -0.47
COL4A3BP-206ENST00000508809 HOXC9P31274 260 aa12.13□□□□□ -0.47
COL4A3BP-206ENST00000508809 LY75O60449 1722 aa12.13□□□□□ -0.47
COL4A3BP-206ENST00000508809 TUBGCP6Q96RT7 1819 aa12.12□□□□□ -0.47
COL4A3BP-206ENST00000508809 FBLN1P23142 703 aa12.12□□□□□ -0.47
COL4A3BP-206ENST00000508809 POLD1P28340 1107 aa12.12□□□□□ -0.47
COL4A3BP-206ENST00000508809 CLCN1P35523 988 aa12.12□□□□□ -0.47
COL4A3BP-206ENST00000508809 C1QTNF8P60827 252 aa12.12□□□□□ -0.47
COL4A3BP-206ENST00000508809 IFFO2Q5TF58 517 aa12.12□□□□□ -0.47
COL4A3BP-206ENST00000508809 ZCRB1Q8TBF4 217 aaKnown RBP12.12□□□□□ -0.47
COL4A3BP-206ENST00000508809 NLRP7Q8WX94 980 aa12.12□□□□□ -0.47
COL4A3BP-206ENST00000508809 LTV1Q96GA3 475 aaPredicted RBP12.12□□□□□ -0.47
COL4A3BP-206ENST00000508809 COG3Q96JB2 828 aa12.12□□□□□ -0.47
COL4A3BP-206ENST00000508809 PHOX2BQ99453 314 aa12.12□□□□□ -0.47
COL4A3BP-206ENST00000508809 NSD2O96028 1365 aa12.12□□□□□ -0.47
COL4A3BP-206ENST00000508809 RGPD2P0DJD1 1756 aa12.12□□□□□ -0.47
COL4A3BP-206ENST00000508809 SHANK3Q9BYB0 1731 aa12.11□□□□□ -0.47
COL4A3BP-206ENST00000508809 ST20-MTHFSA0A0A6YYL1 179 aa12.11□□□□□ -0.47
COL4A3BP-206ENST00000508809 KCNQ4P56696 695 aa12.11□□□□□ -0.47
COL4A3BP-206ENST00000508809 GPR162Q16538 588 aa12.11□□□□□ -0.47
COL4A3BP-206ENST00000508809 IL21Q9HBE4 155 aa12.11□□□□□ -0.47
COL4A3BP-206ENST00000508809 TFCP2L1Q9NZI6 479 aa12.11□□□□□ -0.47
COL4A3BP-206ENST00000508809 PCDHB3Q9Y5E6 796 aa12.11□□□□□ -0.47
COL4A3BP-206ENST00000508809 CEP350Q5VT06 3117 aa12.11□□□□□ -0.47
COL4A3BP-206ENST00000508809 AMPHP49418 695 aa12.1□□□□□ -0.47
COL4A3BP-206ENST00000508809 MDM2Q00987 491 aaPredicted RBP12.1□□□□□ -0.47
COL4A3BP-206ENST00000508809 SYTL4Q96C24 671 aaPredicted RBP12.1□□□□□ -0.47
COL4A3BP-206ENST00000508809 CGNL1Q0VF96 1302 aa12.1□□□□□ -0.47
COL4A3BP-206ENST00000508809 NBPF6Q5VWK0 638 aa12.09□□□□□ -0.47
COL4A3BP-206ENST00000508809 NBPF4Q96M43 638 aa12.09□□□□□ -0.47
COL4A3BP-206ENST00000508809 MTRQ99707 1265 aa12.09□□□□□ -0.47
COL4A3BP-206ENST00000508809 DOT1LQ8TEK3 1739 aa12.08□□□□□ -0.47
COL4A3BP-206ENST00000508809 MEGF6O75095 1541 aa12.08□□□□□ -0.48
COL4A3BP-206ENST00000508809 FYB1O15117 783 aa12.08□□□□□ -0.48
COL4A3BP-206ENST00000508809 ACTN4O43707 911 aaKnown RBP12.08□□□□□ -0.48
COL4A3BP-206ENST00000508809 SLC10A3P09131 477 aa12.08□□□□□ -0.48
COL4A3BP-206ENST00000508809 GPCPD1Q9NPB8 672 aa12.08□□□□□ -0.48
COL4A3BP-206ENST00000508809 CCNL1Q9UK58 526 aaPredicted RBP12.08□□□□□ -0.48
COL4A3BP-206ENST00000508809 RTL1A6NKG5 1358 aa12.07□□□□□ -0.48
COL4A3BP-206ENST00000508809 TONSLQ96HA7 1378 aa12.07□□□□□ -0.48
COL4A3BP-206ENST00000508809 COL23A1Q86Y22 540 aaPredicted RBP12.07□□□□□ -0.48
COL4A3BP-206ENST00000508809 NLGN2Q8NFZ4 835 aa12.07□□□□□ -0.48
COL4A3BP-206ENST00000508809 AK7Q96M32 723 aa12.07□□□□□ -0.48
COL4A3BP-206ENST00000508809 GRIN3BO60391 1043 aa12.06□□□□□ -0.48
COL4A3BP-206ENST00000508809 HMGB2P26583 209 aaKnown RBP12.06□□□□□ -0.48
COL4A3BP-206ENST00000508809 TTLL12Q14166 644 aaPredicted RBP12.06□□□□□ -0.48
COL4A3BP-206ENST00000508809 RRS1Q15050 365 aaKnown RBP12.06□□□□□ -0.48
COL4A3BP-206ENST00000508809 USP47Q96K76 1375 aa12.05□□□□□ -0.48
COL4A3BP-206ENST00000508809 SENP3-EIF4A1A0A087X0R7 540 aa12.05□□□□□ -0.48
COL4A3BP-206ENST00000508809 COPS2P61201 443 aa12.05□□□□□ -0.48
COL4A3BP-206ENST00000508809 TJAP1Q5JTD0 557 aa12.05□□□□□ -0.48
COL4A3BP-206ENST00000508809 YBX3P16989 372 aaKnown RBP eCLIP12.04□□□□□ -0.48
COL4A3BP-206ENST00000508809 RAPGEF4Q8WZA2 1011 aa12.04□□□□□ -0.48
COL4A3BP-206ENST00000508809 GGNBP2Q9H3C7 697 aa12.04□□□□□ -0.48
COL4A3BP-206ENST00000508809 TAF1LQ8IZX4 1826 aa12.04□□□□□ -0.48
COL4A3BP-206ENST00000508809 INSRP06213 1382 aa12.04□□□□□ -0.48
COL4A3BP-206ENST00000508809 KIF24Q5T7B8 1368 aa12.04□□□□□ -0.48
COL4A3BP-206ENST00000508809 GIGYF1O75420 1035 aaPredicted RBP12.03□□□□□ -0.48
COL4A3BP-206ENST00000508809 TATP17735 454 aaPredicted RBP12.03□□□□□ -0.48
COL4A3BP-206ENST00000508809 GRIPAP1Q4V328 841 aa12.03□□□□□ -0.48
COL4A3BP-206ENST00000508809 HSP90AB2PQ58FF8 381 aa12.03□□□□□ -0.48
COL4A3BP-206ENST00000508809 USHBP1Q8N6Y0 703 aa12.03□□□□□ -0.48
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