RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 CHD1LQ86WJ1 897 aa9.96□□□□□ -0.82
NR1I3-226ENST00000508740 PHF12Q96QT6 1004 aa9.96□□□□□ -0.82
NR1I3-226ENST00000508740 DCTPP1Q9H773 170 aa9.96□□□□□ -0.82
NR1I3-226ENST00000508740 TAOK2Q9UL54 1235 aa9.96□□□□□ -0.82
NR1I3-226ENST00000508740 KDM3BQ7LBC6 1761 aa9.96□□□□□ -0.82
NR1I3-226ENST00000508740 PSDA5PKW4 1024 aaPredicted RBP9.95□□□□□ -0.82
NR1I3-226ENST00000508740 GNAI2P04899 355 aa9.95□□□□□ -0.82
NR1I3-226ENST00000508740 GNAI3P08754 354 aa9.95□□□□□ -0.82
NR1I3-226ENST00000508740 ANKRD45Q5TZF3 282 aa9.95□□□□□ -0.82
NR1I3-226ENST00000508740 FAM196AQ6ZSG2 479 aa9.95□□□□□ -0.82
NR1I3-226ENST00000508740 TTC5Q8N0Z6 440 aa9.95□□□□□ -0.82
NR1I3-226ENST00000508740 DDX54Q8TDD1 881 aaKnown RBP9.95□□□□□ -0.82
NR1I3-226ENST00000508740 SGIP1Q9BQI5 828 aa9.95□□□□□ -0.82
NR1I3-226ENST00000508740 HYPKQ9NX55 129 aa9.95□□□□□ -0.82
NR1I3-226ENST00000508740 NRAPQ86VF7 1730 aa9.95□□□□□ -0.82
NR1I3-226ENST00000508740 PI4KAP2A4QPH2 592 aa9.94□□□□□ -0.82
NR1I3-226ENST00000508740 ANXA1P04083 346 aa9.94□□□□□ -0.82
NR1I3-226ENST00000508740 SNRPA1P09661 255 aaKnown RBP9.94□□□□□ -0.82
NR1I3-226ENST00000508740 FAM98CQ17RN3 349 aaKnown RBP9.94□□□□□ -0.82
NR1I3-226ENST00000508740 PROSER3Q2NL68 480 aa9.94□□□□□ -0.82
NR1I3-226ENST00000508740 ZNF467Q7Z7K2 595 aaPredicted RBP9.94□□□□□ -0.82
NR1I3-226ENST00000508740 IFNL1Q8IU54 200 aa9.94□□□□□ -0.82
NR1I3-226ENST00000508740 PI4KAP1Q8N8J0 262 aa9.94□□□□□ -0.82
NR1I3-226ENST00000508740 DNAAF4Q8WXU2 420 aa9.94□□□□□ -0.82
NR1I3-226ENST00000508740 KIF12Q96FN5 646 aa9.94□□□□□ -0.82
NR1I3-226ENST00000508740 ZNF496Q96IT1 587 aaPredicted RBP9.94□□□□□ -0.82
NR1I3-226ENST00000508740 FMNL2Q96PY5 1086 aa9.94□□□□□ -0.82
NR1I3-226ENST00000508740 LNPKQ9C0E8 428 aa9.94□□□□□ -0.82
NR1I3-226ENST00000508740 DDX21Q9NR30 783 aaKnown RBP eCLIP9.94□□□□□ -0.82
NR1I3-226ENST00000508740 PXDNLA1KZ92 1463 aa9.93□□□□□ -0.82
NR1I3-226ENST00000508740 MRC1P22897 1456 aa9.93□□□□□ -0.82
NR1I3-226ENST00000508740 ATP10DQ9P241 1426 aa9.93□□□□□ -0.82
NR1I3-226ENST00000508740 SPATA31A5Q5VU36 1347 aa9.93□□□□□ -0.82
NR1I3-226ENST00000508740 SPATA31A7Q8IWB4 1347 aa9.93□□□□□ -0.82
NR1I3-226ENST00000508740 HMMRO75330 724 aa9.93□□□□□ -0.82
NR1I3-226ENST00000508740 ANP32AP39687 249 aaKnown RBP9.93□□□□□ -0.82
NR1I3-226ENST00000508740 EN1Q05925 392 aaPredicted RBP9.93□□□□□ -0.82
NR1I3-226ENST00000508740 PDIA6Q15084 440 aa9.93□□□□□ -0.82
NR1I3-226ENST00000508740 BEND3Q5T5X7 828 aa9.93□□□□□ -0.82
NR1I3-226ENST00000508740 NBPF14Q5TI25 921 aa9.93□□□□□ -0.82
NR1I3-226ENST00000508740 SRCIN1Q9C0H9 1055 aa9.93□□□□□ -0.82
NR1I3-226ENST00000508740 USP44Q9H0E7 712 aa9.93□□□□□ -0.82
NR1I3-226ENST00000508740 USP35Q9P2H5 1018 aa9.93□□□□□ -0.82
NR1I3-226ENST00000508740 PKD1L3Q7Z443 1732 aa9.93□□□□□ -0.82
NR1I3-226ENST00000508740 THSD7AQ9UPZ6 1657 aa9.93□□□□□ -0.82
NR1I3-226ENST00000508740 ATP8B2P98198 1209 aa9.92□□□□□ -0.82
NR1I3-226ENST00000508740 R3HDM1Q15032 1099 aaKnown RBP9.92□□□□□ -0.82
NR1I3-226ENST00000508740 KSR2Q6VAB6 950 aa9.92□□□□□ -0.82
NR1I3-226ENST00000508740 SIPA1L3O60292 1781 aaPredicted RBP9.92□□□□□ -0.82
NR1I3-226ENST00000508740 TNS1Q9HBL0 1735 aaKnown RBP9.92□□□□□ -0.82
NR1I3-226ENST00000508740 ADCY9O60503 1353 aa9.91□□□□□ -0.82
NR1I3-226ENST00000508740 ALDH1L1O75891 902 aa9.91□□□□□ -0.82
NR1I3-226ENST00000508740 DDX58O95786 925 aaKnown RBP9.91□□□□□ -0.82
NR1I3-226ENST00000508740 YY1P25490 414 aa9.91□□□□□ -0.82
NR1I3-226ENST00000508740 ZNF579Q8NAF0 562 aaKnown RBP9.91□□□□□ -0.82
NR1I3-226ENST00000508740 MAP3K2Q9Y2U5 619 aa9.91□□□□□ -0.82
NR1I3-226ENST00000508740 USP16Q9Y5T5 823 aa9.91□□□□□ -0.82
NR1I3-226ENST00000508740 SCN11AQ9UI33 1791 aa9.91□□□□□ -0.82
NR1I3-226ENST00000508740 C19orf67A6NJJ6 358 aa9.9□□□□□ -0.82
NR1I3-226ENST00000508740 UBTFL1P0CB47 393 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-226ENST00000508740 PDAP1Q13442 181 aaKnown RBP9.9□□□□□ -0.82
NR1I3-226ENST00000508740 NPM2Q86SE8 214 aaKnown RBP9.9□□□□□ -0.82
NR1I3-226ENST00000508740 CAMKK2Q96RR4 588 aa9.9□□□□□ -0.82
NR1I3-226ENST00000508740 LRRFIP2Q9Y608 721 aaKnown RBP9.9□□□□□ -0.82
NR1I3-226ENST00000508740 PARP4Q9UKK3 1724 aaKnown RBP9.9□□□□□ -0.83
NR1I3-226ENST00000508740 CACNA1FO60840 1977 aa9.9□□□□□ -0.83
NR1I3-226ENST00000508740 EXOC5O00471 708 aa9.89□□□□□ -0.83
NR1I3-226ENST00000508740 GTPBP6O43824 516 aaPredicted RBP9.89□□□□□ -0.83
NR1I3-226ENST00000508740 PSEN1P49768 467 aa9.89□□□□□ -0.83
NR1I3-226ENST00000508740 COPS6Q7L5N1 327 aa9.89□□□□□ -0.83
NR1I3-226ENST00000508740 LRP10Q7Z4F1 713 aa9.89□□□□□ -0.83
NR1I3-226ENST00000508740 XAGE3Q8WTP9 111 aa9.89□□□□□ -0.83
NR1I3-226ENST00000508740 IPO9Q96P70 1041 aaKnown RBP9.89□□□□□ -0.83
NR1I3-226ENST00000508740 CDCA7Q9BWT1 371 aaPredicted RBP9.89□□□□□ -0.83
NR1I3-226ENST00000508740 TMOD3Q9NYL9 352 aa9.89□□□□□ -0.83
NR1I3-226ENST00000508740 ERBB4Q15303 1308 aa9.88□□□□□ -0.83
NR1I3-226ENST00000508740 SPATA31A1Q5TZJ5 1347 aa9.88□□□□□ -0.83
NR1I3-226ENST00000508740 PNMA6EA0A0J9YXQ4 647 aa9.88□□□□□ -0.83
NR1I3-226ENST00000508740 SEC24BO95487 1268 aa9.88□□□□□ -0.83
NR1I3-226ENST00000508740 NBPF7P0C2Y1 421 aaPredicted RBP9.88□□□□□ -0.83
NR1I3-226ENST00000508740 MYL6BP14649 208 aa9.88□□□□□ -0.83
NR1I3-226ENST00000508740 AIMP1Q12904 312 aaKnown RBP9.88□□□□□ -0.83
NR1I3-226ENST00000508740 BARGINQ6ZT62 677 aa9.88□□□□□ -0.83
NR1I3-226ENST00000508740 RIC3Q7Z5B4 369 aa9.88□□□□□ -0.83
NR1I3-226ENST00000508740 LINS1Q8NG48 757 aa9.88□□□□□ -0.83
NR1I3-226ENST00000508740 SPON1Q9HCB6 807 aa9.88□□□□□ -0.83
NR1I3-226ENST00000508740 THRAP3Q9Y2W1 955 aaKnown RBP9.88□□□□□ -0.83
NR1I3-226ENST00000508740 APBA3O96018 575 aa9.87□□□□□ -0.83
NR1I3-226ENST00000508740 EZH2Q15910 746 aaKnown RBP9.87□□□□□ -0.83
NR1I3-226ENST00000508740 BMP2KLQ5H9B9 411 aa9.87□□□□□ -0.83
NR1I3-226ENST00000508740 ANKRD13DQ6ZTN6 518 aa9.87□□□□□ -0.83
NR1I3-226ENST00000508740 PPP1R42Q7Z4L9 355 aa9.87□□□□□ -0.83
NR1I3-226ENST00000508740 PLEKHM2Q8IWE5 1019 aa9.87□□□□□ -0.83
NR1I3-226ENST00000508740 C16orf71Q8IYS4 520 aaPredicted RBP9.87□□□□□ -0.83
NR1I3-226ENST00000508740 SSH3Q8TE77 659 aa9.87□□□□□ -0.83
NR1I3-226ENST00000508740 PIGBQ92521 554 aa9.87□□□□□ -0.83
NR1I3-226ENST00000508740 C9orf78Q9NZ63 289 aaPredicted RBP9.87□□□□□ -0.83
NR1I3-226ENST00000508740 PPP1R1BQ9UD71 204 aaPredicted RBP9.87□□□□□ -0.83
NR1I3-226ENST00000508740 HDAC5Q9UQL6 1122 aa9.87□□□□□ -0.83
NR1I3-226ENST00000508740 IBTKQ9P2D0 1353 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms