RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 CCDC144AA2RUR9 1427 aa7.95□□□□□ -1.14
HMGB1P44-201ENST00000508597 A2ML1A8K2U0 1454 aa7.94□□□□□ -1.14
HMGB1P44-201ENST00000508597 SYNMO15061 1565 aa7.94□□□□□ -1.14
HMGB1P44-201ENST00000508597 NEURL4Q96JN8 1562 aa7.94□□□□□ -1.14
HMGB1P44-201ENST00000508597 SEMA3FQ13275 785 aa7.94□□□□□ -1.14
HMGB1P44-201ENST00000508597 IDI1Q13907 227 aa7.94□□□□□ -1.14
HMGB1P44-201ENST00000508597 C6orf118Q5T5N4 469 aa7.94□□□□□ -1.14
HMGB1P44-201ENST00000508597 MRPL14Q6P1L8 145 aaKnown RBP7.94□□□□□ -1.14
HMGB1P44-201ENST00000508597 SEPT12Q8IYM1 358 aa7.94□□□□□ -1.14
HMGB1P44-201ENST00000508597 THEMISQ8N1K5 641 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P44-201ENST00000508597 MEIOBQ8N635 442 aa7.94□□□□□ -1.14
HMGB1P44-201ENST00000508597 PURBQ96QR8 312 aaKnown RBP7.94□□□□□ -1.14
HMGB1P44-201ENST00000508597 UCN2Q96RP3 112 aa7.94□□□□□ -1.14
HMGB1P44-201ENST00000508597 PCDHB11Q9Y5F2 797 aa7.94□□□□□ -1.14
HMGB1P44-201ENST00000508597 ZNF142P52746 1687 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P44-201ENST00000508597 KIF1BO60333 1816 aa7.94□□□□□ -1.14
HMGB1P44-201ENST00000508597 PLA2R1Q13018 1463 aa7.94□□□□□ -1.14
HMGB1P44-201ENST00000508597 MYO3AQ8NEV4 1616 aa7.93□□□□□ -1.14
HMGB1P44-201ENST00000508597 MCCD1P59942 119 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P44-201ENST00000508597 DHX9Q08211 1270 aaKnown RBP7.93□□□□□ -1.14
HMGB1P44-201ENST00000508597 ZNF787Q6DD87 383 aa7.93□□□□□ -1.14
HMGB1P44-201ENST00000508597 PGPEP1Q9NXJ5 209 aa7.93□□□□□ -1.14
HMGB1P44-201ENST00000508597 UGGT1Q9NYU2 1555 aa7.93□□□□□ -1.14
HMGB1P44-201ENST00000508597 CEP170BQ9Y4F5 1589 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P44-201ENST00000508597 SOBPA7XYQ1 873 aa7.92□□□□□ -1.14
HMGB1P44-201ENST00000508597 STAU1O95793 577 aaKnown RBP7.92□□□□□ -1.14
HMGB1P44-201ENST00000508597 ZNF395Q9H8N7 513 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P44-201ENST00000508597 RPGRIP1LQ68CZ1 1315 aa7.92□□□□□ -1.14
HMGB1P44-201ENST00000508597 ERVK-9P63128 1117 aa7.91□□□□□ -1.14
HMGB1P44-201ENST00000508597 RELBQ01201 579 aa7.91□□□□□ -1.14
HMGB1P44-201ENST00000508597 RNF135Q8IUD6 432 aa7.91□□□□□ -1.14
HMGB1P44-201ENST00000508597 WWC1Q8IX03 1113 aa7.91□□□□□ -1.14
HMGB1P44-201ENST00000508597 OSBPL3Q9H4L5 887 aa7.91□□□□□ -1.14
HMGB1P44-201ENST00000508597 ADGRB3O60242 1522 aa7.91□□□□□ -1.14
HMGB1P44-201ENST00000508597 CLTCL1P53675 1640 aa7.91□□□□□ -1.14
HMGB1P44-201ENST00000508597 UBR1Q8IWV7 1749 aa7.91□□□□□ -1.14
HMGB1P44-201ENST00000508597 TMEM131LA2VDJ0 1609 aa7.9□□□□□ -1.14
HMGB1P44-201ENST00000508597 SLFNL1Q499Z3 407 aa7.9□□□□□ -1.14
HMGB1P44-201ENST00000508597 RNF20Q5VTR2 975 aa7.9□□□□□ -1.14
HMGB1P44-201ENST00000508597 TBC1D9Q6ZT07 1266 aa7.9□□□□□ -1.14
HMGB1P44-201ENST00000508597 LINC00528Q8N1L1 170 aa7.9□□□□□ -1.14
HMGB1P44-201ENST00000508597 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.9□□□□□ -1.14
HMGB1P44-201ENST00000508597 GLMNQ92990 594 aa7.9□□□□□ -1.14
HMGB1P44-201ENST00000508597 SLIT1O75093 1534 aa7.89□□□□□ -1.15
HMGB1P44-201ENST00000508597 LMTK3Q96Q04 1460 aa7.89□□□□□ -1.15
HMGB1P44-201ENST00000508597 C11orf95C9JLR9 678 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P44-201ENST00000508597 SOX11P35716 441 aa7.89□□□□□ -1.15
HMGB1P44-201ENST00000508597 PLPP7Q8NBV4 271 aa7.89□□□□□ -1.15
HMGB1P44-201ENST00000508597 CCER1Q8TC90 406 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P44-201ENST00000508597 EID1Q9Y6B2 187 aa7.89□□□□□ -1.15
HMGB1P44-201ENST00000508597 ARHGAP23Q9P227 1491 aa7.88□□□□□ -1.15
HMGB1P44-201ENST00000508597 SPATA31E1Q6ZUB1 1445 aa7.88□□□□□ -1.15
HMGB1P44-201ENST00000508597 TMEM2Q9UHN6 1383 aa7.88□□□□□ -1.15
HMGB1P44-201ENST00000508597 ADH1AP07327 375 aa7.88□□□□□ -1.15
HMGB1P44-201ENST00000508597 BMP2P12643 396 aa7.88□□□□□ -1.15
HMGB1P44-201ENST00000508597 CTSOP43234 321 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P44-201ENST00000508597 OXLD1Q5BKU9 147 aa7.88□□□□□ -1.15
HMGB1P44-201ENST00000508597 CC2D2BQ6DHV5 1058 aa7.88□□□□□ -1.15
HMGB1P44-201ENST00000508597 ANKLE2Q86XL3 938 aa7.88□□□□□ -1.15
HMGB1P44-201ENST00000508597 DEPDC4Q8N2C3 294 aa7.88□□□□□ -1.15
HMGB1P44-201ENST00000508597 TRIM47Q96LD4 638 aa7.88□□□□□ -1.15
HMGB1P44-201ENST00000508597 INSM2Q96T92 566 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P44-201ENST00000508597 ZFYVE9O95405 1425 aa7.87□□□□□ -1.15
HMGB1P44-201ENST00000508597 MYO5BQ9ULV0 1848 aa7.87□□□□□ -1.15
HMGB1P44-201ENST00000508597 SKIP12755 728 aa7.87□□□□□ -1.15
HMGB1P44-201ENST00000508597 PTGIRP43119 386 aa7.87□□□□□ -1.15
HMGB1P44-201ENST00000508597 ZNF326Q5BKZ1 582 aaKnown RBP7.87□□□□□ -1.15
HMGB1P44-201ENST00000508597 HOMEZQ8IX15 550 aa7.87□□□□□ -1.15
HMGB1P44-201ENST00000508597 DOLKQ9UPQ8 538 aa7.87□□□□□ -1.15
HMGB1P44-201ENST00000508597 FIGNL2A6NMB9 653 aa7.86□□□□□ -1.15
HMGB1P44-201ENST00000508597 SPINT1O43278 529 aa7.86□□□□□ -1.15
HMGB1P44-201ENST00000508597 TXNDC2Q86VQ3 553 aa7.86□□□□□ -1.15
HMGB1P44-201ENST00000508597 TSEN34Q9BSV6 310 aaKnown RBP7.86□□□□□ -1.15
HMGB1P44-201ENST00000508597 SCAF11Q99590 1463 aaKnown RBP7.86□□□□□ -1.15
HMGB1P44-201ENST00000508597 RIMS2Q9UQ26 1411 aa7.86□□□□□ -1.15
HMGB1P44-201ENST00000508597 SOS2Q07890 1332 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P44-201ENST00000508597 PPLO60437 1756 aa7.85□□□□□ -1.15
HMGB1P44-201ENST00000508597 SCARF1Q14162 830 aa7.85□□□□□ -1.15
HMGB1P44-201ENST00000508597 CCDC82Q8N4S0 544 aa7.85□□□□□ -1.15
HMGB1P44-201ENST00000508597 ZNF592Q92610 1267 aa7.85□□□□□ -1.15
HMGB1P44-201ENST00000508597 RAB6BQ9NRW1 208 aa7.85□□□□□ -1.15
HMGB1P44-201ENST00000508597 TFIP11Q9UBB9 837 aaKnown RBP7.85□□□□□ -1.15
HMGB1P44-201ENST00000508597 DNMT3LQ9UJW3 386 aa7.85□□□□□ -1.15
HMGB1P44-201ENST00000508597 POLR1AO95602 1720 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P44-201ENST00000508597 MED14O60244 1454 aa7.85□□□□□ -1.15
HMGB1P44-201ENST00000508597 NEXMIFQ5QGS0 1516 aa7.84□□□□□ -1.15
HMGB1P44-201ENST00000508597 MYOM2P54296 1465 aa7.84□□□□□ -1.15
HMGB1P44-201ENST00000508597 A0A1W2PRU2 124 aa7.84□□□□□ -1.15
HMGB1P44-201ENST00000508597 ATP5J2-PTCD1G3V325 749 aa7.84□□□□□ -1.15
HMGB1P44-201ENST00000508597 PPP1R15AO75807 674 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P44-201ENST00000508597 RGL3Q3MIN7 710 aa7.84□□□□□ -1.15
HMGB1P44-201ENST00000508597 CALR3Q96L12 384 aaKnown RBP7.84□□□□□ -1.15
HMGB1P44-201ENST00000508597 SIN3AQ96ST3 1273 aa7.84□□□□□ -1.15
HMGB1P44-201ENST00000508597 TONSLQ96HA7 1378 aa7.84□□□□□ -1.16
HMGB1P44-201ENST00000508597 PLEKHG1Q9ULL1 1385 aa7.84□□□□□ -1.16
HMGB1P44-201ENST00000508597 IFT172Q9UG01 1749 aa7.83□□□□□ -1.16
HMGB1P44-201ENST00000508597 HSPA2P54652 639 aa7.83□□□□□ -1.16
HMGB1P44-201ENST00000508597 NEUROD1Q13562 356 aa7.83□□□□□ -1.16
HMGB1P44-201ENST00000508597 NCOA4Q13772 614 aa7.83□□□□□ -1.16
HMGB1P44-201ENST00000508597 FOXD4L5Q5VV16 416 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms