RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 ZNF428Q96B54 188 aa10.53□□□□□ -0.72
CCSER1-207ENST00000508550 FCF1Q9Y324 198 aaKnown RBP10.53□□□□□ -0.72
CCSER1-207ENST00000508550 KIF20BQ96Q89 1820 aa10.53□□□□□ -0.72
CCSER1-207ENST00000508550 NPHP3Q7Z494 1330 aa10.53□□□□□ -0.72
CCSER1-207ENST00000508550 MAPK8IP3Q9UPT6 1336 aa10.53□□□□□ -0.72
CCSER1-207ENST00000508550 CD2BP2O95400 341 aaKnown RBP10.52□□□□□ -0.73
CCSER1-207ENST00000508550 Q3C1V9 767 aa10.52□□□□□ -0.73
CCSER1-207ENST00000508550 RSPH6AQ9H0K4 717 aa10.52□□□□□ -0.73
CCSER1-207ENST00000508550 MYH16Q9H6N6 1097 aa10.52□□□□□ -0.73
CCSER1-207ENST00000508550 SUPT16HQ9Y5B9 1047 aaKnown RBP10.52□□□□□ -0.73
CCSER1-207ENST00000508550 USP19O94966 1318 aa10.52□□□□□ -0.73
CCSER1-207ENST00000508550 ARHGEF10O15013 1369 aa10.52□□□□□ -0.73
CCSER1-207ENST00000508550 NALCNQ8IZF0 1738 aa10.51□□□□□ -0.73
CCSER1-207ENST00000508550 TNFRSF10AO00220 468 aa10.51□□□□□ -0.73
CCSER1-207ENST00000508550 KDM4AO75164 1064 aa10.51□□□□□ -0.73
CCSER1-207ENST00000508550 TMPOP42166 694 aaKnown RBP10.51□□□□□ -0.73
CCSER1-207ENST00000508550 RNF19BQ6ZMZ0 732 aa10.51□□□□□ -0.73
CCSER1-207ENST00000508550 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.51□□□□□ -0.73
CCSER1-207ENST00000508550 RCAN3Q9UKA8 241 aa10.51□□□□□ -0.73
CCSER1-207ENST00000508550 EMILIN1Q9Y6C2 1016 aa10.51□□□□□ -0.73
CCSER1-207ENST00000508550 KDRP35968 1356 aa10.51□□□□□ -0.73
CCSER1-207ENST00000508550 KIF1AQ12756 1690 aa10.5□□□□□ -0.73
CCSER1-207ENST00000508550 SHPRHQ149N8 1683 aa10.5□□□□□ -0.73
CCSER1-207ENST00000508550 U2SURPO15042 1029 aaKnown RBP10.5□□□□□ -0.73
CCSER1-207ENST00000508550 HTATSF1O43719 755 aaKnown RBP10.5□□□□□ -0.73
CCSER1-207ENST00000508550 HSPA2P54652 639 aa10.5□□□□□ -0.73
CCSER1-207ENST00000508550 USP46P62068 366 aa10.5□□□□□ -0.73
CCSER1-207ENST00000508550 MDM2Q00987 491 aaPredicted RBP10.5□□□□□ -0.73
CCSER1-207ENST00000508550 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.5□□□□□ -0.73
CCSER1-207ENST00000508550 IP6K1Q92551 441 aa10.5□□□□□ -0.73
CCSER1-207ENST00000508550 PRDM9Q9NQV7 894 aa10.5□□□□□ -0.73
CCSER1-207ENST00000508550 MAP3K19Q56UN5 1328 aa10.5□□□□□ -0.73
CCSER1-207ENST00000508550 MMP16P51512 607 aa10.49□□□□□ -0.73
CCSER1-207ENST00000508550 AAMPQ13685 434 aa10.49□□□□□ -0.73
CCSER1-207ENST00000508550 EIF4A2Q14240 407 aaKnown RBP10.49□□□□□ -0.73
CCSER1-207ENST00000508550 NFE2L2Q16236 605 aa10.49□□□□□ -0.73
CCSER1-207ENST00000508550 KRT28Q7Z3Y7 464 aa10.49□□□□□ -0.73
CCSER1-207ENST00000508550 CCDC102AQ96A19 550 aa10.49□□□□□ -0.73
CCSER1-207ENST00000508550 RRS1Q15050 365 aaKnown RBP10.48□□□□□ -0.73
CCSER1-207ENST00000508550 CCDC146Q8IYE0 955 aa10.48□□□□□ -0.73
CCSER1-207ENST00000508550 IGSF1Q8N6C5 1336 aa10.48□□□□□ -0.73
CCSER1-207ENST00000508550 ABCC6O95255 1503 aa10.48□□□□□ -0.73
CCSER1-207ENST00000508550 FAM187AA6NFU0 413 aa10.47□□□□□ -0.73
CCSER1-207ENST00000508550 HOXC9P31274 260 aa10.47□□□□□ -0.73
CCSER1-207ENST00000508550 AMPHP49418 695 aa10.47□□□□□ -0.73
CCSER1-207ENST00000508550 ARHGEF25Q86VW2 580 aa10.47□□□□□ -0.73
CCSER1-207ENST00000508550 ORAI2Q96SN7 254 aa10.47□□□□□ -0.73
CCSER1-207ENST00000508550 BABAM1Q9NWV8 329 aa10.47□□□□□ -0.73
CCSER1-207ENST00000508550 SLIT3O75094 1523 aa10.47□□□□□ -0.73
CCSER1-207ENST00000508550 PPM1GO15355 546 aaPredicted RBP10.46□□□□□ -0.73
CCSER1-207ENST00000508550 FOXO3O43524 673 aa10.46□□□□□ -0.73
CCSER1-207ENST00000508550 GCP02774 474 aa10.46□□□□□ -0.73
CCSER1-207ENST00000508550 PRKAR2BP31323 418 aa10.46□□□□□ -0.73
CCSER1-207ENST00000508550 BRPF1P55201 1214 aaPredicted RBP10.46□□□□□ -0.73
CCSER1-207ENST00000508550 RRP1P56182 461 aaKnown RBP10.46□□□□□ -0.73
CCSER1-207ENST00000508550 RIPK4P57078 832 aa10.46□□□□□ -0.73
CCSER1-207ENST00000508550 GPCPD1Q9NPB8 672 aa10.46□□□□□ -0.73
CCSER1-207ENST00000508550 TOR4AQ9NXH8 423 aa10.46□□□□□ -0.73
CCSER1-207ENST00000508550 PPP4R2Q9NY27 417 aa10.46□□□□□ -0.73
CCSER1-207ENST00000508550 SLAIN2Q9P270 581 aa10.46□□□□□ -0.73
CCSER1-207ENST00000508550 STRCQ7RTU9 1775 aa10.45□□□□□ -0.74
CCSER1-207ENST00000508550 PHRF1Q9P1Y6 1649 aaKnown RBP10.45□□□□□ -0.74
CCSER1-207ENST00000508550 SOS2Q07890 1332 aaPredicted RBP10.45□□□□□ -0.74
CCSER1-207ENST00000508550 CLCN1P35523 988 aa10.45□□□□□ -0.74
CCSER1-207ENST00000508550 FOXC1Q12948 553 aa10.45□□□□□ -0.74
CCSER1-207ENST00000508550 HSP90AB2PQ58FF8 381 aa10.45□□□□□ -0.74
CCSER1-207ENST00000508550 GAS2L2Q8NHY3 880 aa10.45□□□□□ -0.74
CCSER1-207ENST00000508550 USB1Q9BQ65 265 aaKnown RBP10.45□□□□□ -0.74
CCSER1-207ENST00000508550 FAM217BQ9NTX9 383 aaPredicted RBP10.45□□□□□ -0.74
CCSER1-207ENST00000508550 IFT57Q9NWB7 429 aa10.45□□□□□ -0.74
CCSER1-207ENST00000508550 PIK3C2AO00443 1686 aa10.44□□□□□ -0.74
CCSER1-207ENST00000508550 CPDO75976 1380 aa10.44□□□□□ -0.74
CCSER1-207ENST00000508550 SOS1Q07889 1333 aaPredicted RBP10.44□□□□□ -0.74
CCSER1-207ENST00000508550 SPATA31A3Q5VYP0 1347 aa10.44□□□□□ -0.74
CCSER1-207ENST00000508550 DXOO77932 396 aaKnown RBP10.44□□□□□ -0.74
CCSER1-207ENST00000508550 MS4A1P11836 297 aa10.44□□□□□ -0.74
CCSER1-207ENST00000508550 GNAI1P63096 354 aa10.44□□□□□ -0.74
CCSER1-207ENST00000508550 NFAT5O94916 1531 aa10.43□□□□□ -0.74
CCSER1-207ENST00000508550 NCAPD2Q15021 1401 aa10.43□□□□□ -0.74
CCSER1-207ENST00000508550 HOXA2O43364 376 aa10.43□□□□□ -0.74
CCSER1-207ENST00000508550 ZNF853P0CG23 659 aa10.43□□□□□ -0.74
CCSER1-207ENST00000508550 PDE3AQ14432 1141 aa10.43□□□□□ -0.74
CCSER1-207ENST00000508550 SULT6B1Q6IMI4 303 aa10.43□□□□□ -0.74
CCSER1-207ENST00000508550 BRINP3Q76B58 766 aa10.43□□□□□ -0.74
CCSER1-207ENST00000508550 CRIPAKQ8N1N5 446 aa10.43□□□□□ -0.74
CCSER1-207ENST00000508550 CHMP4AQ9BY43 222 aa10.43□□□□□ -0.74
CCSER1-207ENST00000508550 TNS3Q68CZ2 1445 aa10.42□□□□□ -0.74
CCSER1-207ENST00000508550 ZNF335Q9H4Z2 1342 aaPredicted RBP10.42□□□□□ -0.74
CCSER1-207ENST00000508550 ZBTB24O43167 697 aaPredicted RBP10.42□□□□□ -0.74
CCSER1-207ENST00000508550 AVPP01185 164 aa10.42□□□□□ -0.74
CCSER1-207ENST00000508550 ALDH1L2Q3SY69 923 aa10.42□□□□□ -0.74
CCSER1-207ENST00000508550 AAASQ9NRG9 546 aa10.42□□□□□ -0.74
CCSER1-207ENST00000508550 FBLN1P23142 703 aa10.41□□□□□ -0.74
CCSER1-207ENST00000508550 AMOTQ4VCS5 1084 aa10.41□□□□□ -0.74
CCSER1-207ENST00000508550 HLA-CQ95604 372 aa10.41□□□□□ -0.74
CCSER1-207ENST00000508550 PXDNQ92626 1479 aa10.41□□□□□ -0.74
CCSER1-207ENST00000508550 MED1Q15648 1581 aaPredicted RBP10.4□□□□□ -0.74
CCSER1-207ENST00000508550 POTECB2RU33 542 aa10.4□□□□□ -0.74
CCSER1-207ENST00000508550 ZNF775Q96BV0 537 aaPredicted RBP10.4□□□□□ -0.74
CCSER1-207ENST00000508550 PHACTR3Q96KR7 559 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms