RNA–Protein interactions for RNA: ENST00000508416.1

SKI-204, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 252 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-204ENST00000508416 KLHL34Q8N239 644 aa13.62□□□□□ -0.23
SKI-204ENST00000508416 CDCA7LQ96GN5 454 aa13.62□□□□□ -0.23
SKI-204ENST00000508416 FHDC1Q9C0D6 1143 aaPredicted RBP13.62□□□□□ -0.23
SKI-204ENST00000508416 PARP3Q9Y6F1 533 aa13.62□□□□□ -0.23
SKI-204ENST00000508416 DDR1Q08345 913 aa13.61□□□□□ -0.23
SKI-204ENST00000508416 AIMP1Q12904 312 aaKnown RBP13.61□□□□□ -0.23
SKI-204ENST00000508416 TBC1D9BQ66K14 1250 aa13.61□□□□□ -0.23
SKI-204ENST00000508416 CLEC4GQ6UXB4 293 aa13.61□□□□□ -0.23
SKI-204ENST00000508416 COPS6Q7L5N1 327 aa13.61□□□□□ -0.23
SKI-204ENST00000508416 XAGE3Q8WTP9 111 aa13.61□□□□□ -0.23
SKI-204ENST00000508416 HYPKQ9NX55 129 aa13.61□□□□□ -0.23
SKI-204ENST00000508416 ERVV-1B6SEH8 477 aa13.6□□□□□ -0.23
SKI-204ENST00000508416 TCERG1O14776 1098 aaKnown RBP13.6□□□□□ -0.23
SKI-204ENST00000508416 VAMP4O75379 141 aa13.6□□□□□ -0.23
SKI-204ENST00000508416 HLFQ16534 295 aa13.6□□□□□ -0.23
SKI-204ENST00000508416 SYT17Q9BSW7 474 aa13.6□□□□□ -0.23
SKI-204ENST00000508416 ZBTB3Q9H5J0 574 aa13.6□□□□□ -0.23
SKI-204ENST00000508416 ZNF652Q9Y2D9 606 aa13.6□□□□□ -0.23
SKI-204ENST00000508416 BCORQ6W2J9 1755 aa13.6□□□□□ -0.23
SKI-204ENST00000508416 MAP3K15Q6ZN16 1313 aa13.6□□□□□ -0.23
SKI-204ENST00000508416 NUP98P52948 1817 aa13.6□□□□□ -0.23
SKI-204ENST00000508416 SCN7AQ01118 1682 aa13.59□□□□□ -0.23
SKI-204ENST00000508416 POLRMTO00411 1230 aaKnown RBP13.59□□□□□ -0.23
SKI-204ENST00000508416 SETDB2Q96T68 719 aa13.59□□□□□ -0.23
SKI-204ENST00000508416 RGL2O15211 777 aa13.58□□□□□ -0.24
SKI-204ENST00000508416 SERPINB2P05120 415 aa13.58□□□□□ -0.24
SKI-204ENST00000508416 TRMT2AQ8IZ69 625 aaKnown RBP13.58□□□□□ -0.24
SKI-204ENST00000508416 STK31Q9BXU1 1019 aa13.58□□□□□ -0.24
SKI-204ENST00000508416 CD2APQ9Y5K6 639 aa13.58□□□□□ -0.24
SKI-204ENST00000508416 AFDNP55196 1824 aaKnown RBP13.57□□□□□ -0.24
SKI-204ENST00000508416 SLC4A2P04920 1241 aa13.57□□□□□ -0.24
SKI-204ENST00000508416 ANKRD13DQ6ZTN6 518 aa13.57□□□□□ -0.24
SKI-204ENST00000508416 PHAXQ9H814 394 aaKnown RBP13.57□□□□□ -0.24
SKI-204ENST00000508416 NIP7Q9Y221 180 aaKnown RBP eCLIP13.57□□□□□ -0.24
SKI-204ENST00000508416 CACNA1FO60840 1977 aa13.56□□□□□ -0.24
SKI-204ENST00000508416 GIGYF2Q6Y7W6 1299 aaKnown RBP13.56□□□□□ -0.24
SKI-204ENST00000508416 PLBD2Q8NHP8 589 aa13.56□□□□□ -0.24
SKI-204ENST00000508416 GPTP24298 496 aa13.55□□□□□ -0.24
SKI-204ENST00000508416 NLGN2Q8NFZ4 835 aa13.55□□□□□ -0.24
SKI-204ENST00000508416 CARMIL3Q8ND23 1372 aa13.55□□□□□ -0.24
SKI-204ENST00000508416 FAM177BA6PVY3 158 aa13.54□□□□□ -0.24
SKI-204ENST00000508416 NPHP1O15259 732 aa13.54□□□□□ -0.24
SKI-204ENST00000508416 TCIRG1Q13488 830 aa13.54□□□□□ -0.24
SKI-204ENST00000508416 HSP90AB3PQ58FF7 597 aa13.54□□□□□ -0.24
SKI-204ENST00000508416 G2E3Q7L622 706 aa13.54□□□□□ -0.24
SKI-204ENST00000508416 RIC3Q7Z5B4 369 aa13.54□□□□□ -0.24
SKI-204ENST00000508416 NBPF5PQ86XG9 351 aaPredicted RBP13.54□□□□□ -0.24
SKI-204ENST00000508416 ZNF34Q8IZ26 560 aa13.54□□□□□ -0.24
SKI-204ENST00000508416 NRXN2Q9P2S2 1712 aa13.53□□□□□ -0.24
SKI-204ENST00000508416 KIF13BQ9NQT8 1826 aa13.53□□□□□ -0.24
SKI-204ENST00000508416 DDX58O95786 925 aaKnown RBP13.53□□□□□ -0.24
SKI-204ENST00000508416 TPTE2Q6XPS3 522 aa13.53□□□□□ -0.24
SKI-204ENST00000508416 CCDC24Q8N4L8 307 aa13.53□□□□□ -0.24
SKI-204ENST00000508416 TGFB2P61812 414 aa13.52□□□□□ -0.25
SKI-204ENST00000508416 PRR5LQ6MZQ0 368 aa13.52□□□□□ -0.25
SKI-204ENST00000508416 CNBD1Q8NA66 436 aa13.52□□□□□ -0.25
SKI-204ENST00000508416 ZBED9Q6R2W3 1325 aa13.52□□□□□ -0.25
SKI-204ENST00000508416 C10orf71Q711Q0 1435 aa13.52□□□□□ -0.25
SKI-204ENST00000508416 ATP10DQ9P241 1426 aa13.52□□□□□ -0.25
SKI-204ENST00000508416 ANKRD36CQ5JPF3 1778 aa13.51□□□□□ -0.25
SKI-204ENST00000508416 UBN2Q6ZU65 1347 aa13.51□□□□□ -0.25
SKI-204ENST00000508416 A0A0G2JLW4 131 aa13.51□□□□□ -0.25
SKI-204ENST00000508416 GTF2E1P29083 439 aaPredicted RBP13.51□□□□□ -0.25
SKI-204ENST00000508416 FLIIQ13045 1269 aa13.51□□□□□ -0.25
SKI-204ENST00000508416 PARP10Q53GL7 1025 aa13.51□□□□□ -0.25
SKI-204ENST00000508416 SUSD4Q5VX71 490 aa13.51□□□□□ -0.25
SKI-204ENST00000508416 KSR2Q6VAB6 950 aa13.51□□□□□ -0.25
SKI-204ENST00000508416 ZNF784Q8NCA9 323 aaPredicted RBP13.51□□□□□ -0.25
SKI-204ENST00000508416 N4BP2Q86UW6 1770 aaPredicted RBP13.5□□□□□ -0.25
SKI-204ENST00000508416 ARFGEF2Q9Y6D5 1785 aa13.5□□□□□ -0.25
SKI-204ENST00000508416 PI4KAP2A4QPH2 592 aa13.5□□□□□ -0.25
SKI-204ENST00000508416 ATP5J2-PTCD1G3V325 749 aa13.5□□□□□ -0.25
SKI-204ENST00000508416 CT47B1P0C2W7 299 aaPredicted RBP13.5□□□□□ -0.25
SKI-204ENST00000508416 DPEP1P16444 411 aa13.5□□□□□ -0.25
SKI-204ENST00000508416 ST5P78524 1137 aa13.5□□□□□ -0.25
SKI-204ENST00000508416 PPP1R42Q7Z4L9 355 aa13.5□□□□□ -0.25
SKI-204ENST00000508416 PI4KAP1Q8N8J0 262 aa13.5□□□□□ -0.25
SKI-204ENST00000508416 ZNF428Q96B54 188 aa13.5□□□□□ -0.25
SKI-204ENST00000508416 BRIP1Q9BX63 1249 aa13.5□□□□□ -0.25
SKI-204ENST00000508416 NYXQ9GZU5 481 aa13.5□□□□□ -0.25
SKI-204ENST00000508416 MAP3K2Q9Y2U5 619 aa13.5□□□□□ -0.25
SKI-204ENST00000508416 CHRNA5P30532 468 aa13.49□□□□□ -0.25
SKI-204ENST00000508416 FKBP5Q13451 457 aaPredicted RBP13.49□□□□□ -0.25
SKI-204ENST00000508416 NLRP10Q86W26 655 aa13.49□□□□□ -0.25
SKI-204ENST00000508416 NUTM1Q86Y26 1132 aa13.49□□□□□ -0.25
SKI-204ENST00000508416 MRPL50Q8N5N7 158 aaKnown RBP13.49□□□□□ -0.25
SKI-204ENST00000508416 SSH1Q8WYL5 1049 aa13.49□□□□□ -0.25
SKI-204ENST00000508416 MYD88Q99836 296 aa13.49□□□□□ -0.25
SKI-204ENST00000508416 ISCA1Q9BUE6 129 aa13.49□□□□□ -0.25
SKI-204ENST00000508416 METTL22Q9BUU2 404 aaPredicted RBP13.49□□□□□ -0.25
SKI-204ENST00000508416 UTP14AQ9BVJ6 771 aaKnown RBP13.49□□□□□ -0.25
SKI-204ENST00000508416 ANKRD31Q8N7Z5 1873 aa13.48□□□□□ -0.25
SKI-204ENST00000508416 UTRNP46939 3433 aa13.48□□□□□ -0.25
SKI-204ENST00000508416 H0YIN7 160 aa13.48□□□□□ -0.25
SKI-204ENST00000508416 KCNA3P22001 575 aa13.48□□□□□ -0.25
SKI-204ENST00000508416 PDE6BP35913 854 aa13.48□□□□□ -0.25
SKI-204ENST00000508416 TRIM28Q13263 835 aaKnown RBP13.48□□□□□ -0.25
SKI-204ENST00000508416 ALDH1L2Q3SY69 923 aa13.48□□□□□ -0.25
SKI-204ENST00000508416 ERFEQ4G0M1 354 aa13.48□□□□□ -0.25
SKI-204ENST00000508416 C2CD5Q86YS7 1000 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms