RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 NFATC2IPQ8NCF5 419 aa3.61□□□□□ -1.83
NEDD4-208ENST00000508342 NLRP3Q96P20 1036 aa3.61□□□□□ -1.83
NEDD4-208ENST00000508342 MIS18AQ9NYP9 233 aa3.61□□□□□ -1.83
NEDD4-208ENST00000508342 MROH1Q8NDA8 1641 aa3.61□□□□□ -1.83
NEDD4-208ENST00000508342 CA8P35219 290 aa3.61□□□□□ -1.83
NEDD4-208ENST00000508342 TXNRD1Q16881 649 aa3.61□□□□□ -1.83
NEDD4-208ENST00000508342 SLC4A8Q2Y0W8 1093 aa3.61□□□□□ -1.83
NEDD4-208ENST00000508342 SMC1BQ8NDV3 1235 aa3.61□□□□□ -1.83
NEDD4-208ENST00000508342 CDC5LQ99459 802 aaKnown RBP3.61□□□□□ -1.83
NEDD4-208ENST00000508342 CACNA1SQ13698 1873 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 STRCP1A6NGW2 1772 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 IBSPP21815 317 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-208ENST00000508342 TNIP1Q15025 636 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 BARGINQ6ZT62 677 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 RUNDC1Q96C34 613 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 DLC1Q96QB1 1528 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 MAP2P11137 1827 aaKnown RBP3.6□□□□□ -1.83
NEDD4-208ENST00000508342 MAFGO15525 162 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 SLC3A2P08195 630 aaKnown RBP3.6□□□□□ -1.83
NEDD4-208ENST00000508342 MAP3K9P80192 1104 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 ARMC9Q7Z3E5 817 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 PSMD1Q99460 953 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 MTMR7Q9Y216 660 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 SSH2Q76I76 1423 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 RALGAPBQ86X10 1494 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 RGS12O14924 1447 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 SNRPA1P09661 255 aaKnown RBP3.6□□□□□ -1.83
NEDD4-208ENST00000508342 MKRN3Q13064 507 aaKnown RBP3.6□□□□□ -1.83
NEDD4-208ENST00000508342 G3BP1Q13283 466 aaKnown RBP eCLIP3.6□□□□□ -1.83
NEDD4-208ENST00000508342 DCAF5Q96JK2 942 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 TRAIPQ9BWF2 469 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 USP6P35125 1406 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 LRRFIP1Q32MZ4 808 aaKnown RBP3.6□□□□□ -1.83
NEDD4-208ENST00000508342 DZIP1Q86YF9 867 aaKnown RBP3.6□□□□□ -1.83
NEDD4-208ENST00000508342 SULF1Q8IWU6 871 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 TMEM106CQ9BVX2 250 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 ZBTB3Q9H5J0 574 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 PICK1Q9NRD5 415 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 TBC1D2BQ9UPU7 963 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 EMILIN1Q9Y6C2 1016 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 ARHGEF28Q8N1W1 1705 aaKnown RBP3.6□□□□□ -1.83
NEDD4-208ENST00000508342 PHRF1Q9P1Y6 1649 aaKnown RBP3.6□□□□□ -1.83
NEDD4-208ENST00000508342 MYOM2P54296 1465 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 FLT4P35916 1363 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 WDR17Q8IZU2 1322 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 TAF7Q15545 349 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-208ENST00000508342 DNTTIP2Q5QJE6 756 aaKnown RBP3.6□□□□□ -1.83
NEDD4-208ENST00000508342 B4GALNT3Q6L9W6 998 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 ANKRD18AQ8IVF6 992 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 CCDC24Q8N4L8 307 aa3.6□□□□□ -1.83
NEDD4-208ENST00000508342 GNAI1P63096 354 aa3.59□□□□□ -1.83
NEDD4-208ENST00000508342 AKAP17AQ02040 695 aaKnown RBP3.59□□□□□ -1.83
NEDD4-208ENST00000508342 FHDC1Q9C0D6 1143 aaPredicted RBP3.59□□□□□ -1.83
NEDD4-208ENST00000508342 PRKAG2Q9UGJ0 569 aa3.59□□□□□ -1.83
NEDD4-208ENST00000508342 ANKRD18BA2A2Z9 1011 aa3.59□□□□□ -1.83
NEDD4-208ENST00000508342 SLC39A6Q13433 755 aa3.59□□□□□ -1.83
NEDD4-208ENST00000508342 HACL1Q9UJ83 578 aa3.59□□□□□ -1.83
NEDD4-208ENST00000508342 MST1RQ04912 1400 aa3.59□□□□□ -1.83
NEDD4-208ENST00000508342 IQCA1LA6NCM1 817 aa3.59□□□□□ -1.83
NEDD4-208ENST00000508342 HDGFL1Q5TGJ6 251 aa3.59□□□□□ -1.83
NEDD4-208ENST00000508342 MCM10Q7L590 875 aa3.59□□□□□ -1.83
NEDD4-208ENST00000508342 CNKSR1Q969H4 720 aa3.59□□□□□ -1.83
NEDD4-208ENST00000508342 SLC24A3Q9HC58 644 aa3.59□□□□□ -1.83
NEDD4-208ENST00000508342 FAM208AQ9UK61 1670 aaKnown RBP3.59□□□□□ -1.83
NEDD4-208ENST00000508342 A0A0G2JLW4 131 aa3.59□□□□□ -1.83
NEDD4-208ENST00000508342 SLC15A2Q16348 729 aa3.59□□□□□ -1.83
NEDD4-208ENST00000508342 CCDC158Q5M9N0 1113 aa3.59□□□□□ -1.83
NEDD4-208ENST00000508342 NOL8Q76FK4 1167 aaKnown RBP3.59□□□□□ -1.83
NEDD4-208ENST00000508342 TTLL6Q8N841 843 aa3.59□□□□□ -1.83
NEDD4-208ENST00000508342 CDK12Q9NYV4 1490 aaPredicted RBP3.59□□□□□ -1.83
NEDD4-208ENST00000508342 PALLDQ8WX93 1383 aa3.59□□□□□ -1.83
NEDD4-208ENST00000508342 MYBBP1AQ9BQG0 1328 aaKnown RBP3.59□□□□□ -1.84
NEDD4-208ENST00000508342 TRIM6-TRIM34B2RNG4 842 aa3.59□□□□□ -1.84
NEDD4-208ENST00000508342 SLC5A1P13866 664 aa3.59□□□□□ -1.84
NEDD4-208ENST00000508342 CCDC93Q567U6 631 aa3.59□□□□□ -1.84
NEDD4-208ENST00000508342 NHSL1Q5SYE7 1610 aa3.59□□□□□ -1.84
NEDD4-208ENST00000508342 MYCP01106 439 aaPredicted RBP3.59□□□□□ -1.84
NEDD4-208ENST00000508342 USP5P45974 858 aa3.59□□□□□ -1.84
NEDD4-208ENST00000508342 CRKLP46109 303 aaKnown RBP3.59□□□□□ -1.84
NEDD4-208ENST00000508342 PIP4K2AP48426 406 aaPredicted RBP3.59□□□□□ -1.84
NEDD4-208ENST00000508342 APLP1P51693 650 aa3.59□□□□□ -1.84
NEDD4-208ENST00000508342 RTKN2Q8IZC4 609 aa3.59□□□□□ -1.84
NEDD4-208ENST00000508342 AHDC1Q5TGY3 1603 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-208ENST00000508342 PRAG1Q86YV5 1406 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 ERVV-2B6SEH9 535 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 PPM1FP49593 454 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-208ENST00000508342 PLS1Q14651 629 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 METTL24Q5JXM2 366 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 TNS4Q8IZW8 715 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 STK11IPQ8N1F8 1099 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 ZC3H12CQ9C0D7 883 aaKnown RBP3.58□□□□□ -1.84
NEDD4-208ENST00000508342 GZF1Q9H116 711 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-208ENST00000508342 CWC25Q9NXE8 425 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-208ENST00000508342 ANKRD36BQ8N2N9 1353 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 MAP3K5Q99683 1374 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 NRXN1Q9ULB1 1477 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 RNMTO43148 476 aaKnown RBP3.58□□□□□ -1.84
NEDD4-208ENST00000508342 SETDB1Q15047 1291 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 SNRNP27Q8WVK2 155 aaKnown RBP3.58□□□□□ -1.84
NEDD4-208ENST00000508342 MPHOSPH6Q99547 160 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms