RNA–Protein interactions for RNA: ENST00000508132.1

CDH6-204, Transcript of cadherin 6, humanhuman

TSL 2

Gene CDH6, Length 678 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-204ENST00000508132 SOBPA7XYQ1 873 aa11.09□□□□□ -0.63
CDH6-204ENST00000508132 LORP23490 312 aaPredicted RBP11.09□□□□□ -0.63
CDH6-204ENST00000508132 XPCQ01831 940 aaPredicted RBP11.09□□□□□ -0.63
CDH6-204ENST00000508132 FOXJ1Q92949 421 aa11.09□□□□□ -0.63
CDH6-204ENST00000508132 ERBB4Q15303 1308 aa11.09□□□□□ -0.63
CDH6-204ENST00000508132 KANK1Q14678 1352 aa11.08□□□□□ -0.64
CDH6-204ENST00000508132 NINLQ9Y2I6 1382 aa11.08□□□□□ -0.64
CDH6-204ENST00000508132 CTHP32929 405 aa11.08□□□□□ -0.64
CDH6-204ENST00000508132 DESI1Q6ICB0 168 aa11.08□□□□□ -0.64
CDH6-204ENST00000508132 CABLES1Q8TDN4 633 aa11.08□□□□□ -0.64
CDH6-204ENST00000508132 NWD2Q9ULI1 1742 aa11.08□□□□□ -0.64
CDH6-204ENST00000508132 NUP155O75694 1391 aa11.07□□□□□ -0.64
CDH6-204ENST00000508132 TIMP2P16035 220 aa11.07□□□□□ -0.64
CDH6-204ENST00000508132 NEUROD1Q13562 356 aa11.07□□□□□ -0.64
CDH6-204ENST00000508132 CAMKK2Q96RR4 588 aa11.07□□□□□ -0.64
CDH6-204ENST00000508132 SIN3AQ96ST3 1273 aa11.07□□□□□ -0.64
CDH6-204ENST00000508132 GOLGB1Q14789 3259 aaKnown RBP11.07□□□□□ -0.64
CDH6-204ENST00000508132 MYOM1P52179 1685 aa11.07□□□□□ -0.64
CDH6-204ENST00000508132 NRAPQ86VF7 1730 aa11.06□□□□□ -0.64
CDH6-204ENST00000508132 ABCA3Q99758 1704 aa11.06□□□□□ -0.64
CDH6-204ENST00000508132 VARSP26640 1264 aaKnown RBP11.06□□□□□ -0.64
CDH6-204ENST00000508132 VPS72Q15906 364 aa11.06□□□□□ -0.64
CDH6-204ENST00000508132 LYPD8Q6UX82 237 aa11.06□□□□□ -0.64
CDH6-204ENST00000508132 NRKQ7Z2Y5 1582 aa11.06□□□□□ -0.64
CDH6-204ENST00000508132 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.05□□□□□ -0.64
CDH6-204ENST00000508132 PURBQ96QR8 312 aaKnown RBP11.05□□□□□ -0.64
CDH6-204ENST00000508132 SPDYE5A6NIY4 337 aa11.04□□□□□ -0.64
CDH6-204ENST00000508132 H3BM21 787 aa11.04□□□□□ -0.64
CDH6-204ENST00000508132 PER1O15534 1290 aaPredicted RBP11.04□□□□□ -0.64
CDH6-204ENST00000508132 F12P00748 615 aaPredicted RBP11.04□□□□□ -0.64
CDH6-204ENST00000508132 WDR4P57081 412 aaKnown RBP11.04□□□□□ -0.64
CDH6-204ENST00000508132 CSPP1Q1MSJ5 1256 aa11.04□□□□□ -0.64
CDH6-204ENST00000508132 C4orf48Q5BLP8 95 aa11.04□□□□□ -0.64
CDH6-204ENST00000508132 SLC16A10Q8TF71 515 aa11.04□□□□□ -0.64
CDH6-204ENST00000508132 KLF16Q9BXK1 252 aaPredicted RBP11.04□□□□□ -0.64
CDH6-204ENST00000508132 PPP1R1BQ9UD71 204 aaPredicted RBP11.04□□□□□ -0.64
CDH6-204ENST00000508132 CASZ1Q86V15 1759 aa11.03□□□□□ -0.64
CDH6-204ENST00000508132 TRIM66O15016 1216 aa11.03□□□□□ -0.64
CDH6-204ENST00000508132 SPTLC1O15269 473 aa11.03□□□□□ -0.64
CDH6-204ENST00000508132 MRPL14Q6P1L8 145 aaKnown RBP11.03□□□□□ -0.64
CDH6-204ENST00000508132 TIMELESSQ9UNS1 1208 aa11.03□□□□□ -0.64
CDH6-204ENST00000508132 RPRD2Q5VT52 1461 aaKnown RBP11.03□□□□□ -0.64
CDH6-204ENST00000508132 THSD7AQ9UPZ6 1657 aa11.03□□□□□ -0.64
CDH6-204ENST00000508132 E9PCH4 1651 aa11.02□□□□□ -0.64
CDH6-204ENST00000508132 NR3C2P08235 984 aa11.02□□□□□ -0.65
CDH6-204ENST00000508132 ZFAND3Q9H8U3 227 aa11.02□□□□□ -0.65
CDH6-204ENST00000508132 ADGRB2O60241 1585 aa11.02□□□□□ -0.65
CDH6-204ENST00000508132 KCNQ2O43526 872 aa11.01□□□□□ -0.65
CDH6-204ENST00000508132 ADH1CP00326 375 aa11.01□□□□□ -0.65
CDH6-204ENST00000508132 MPNDQ8N594 471 aa11.01□□□□□ -0.65
CDH6-204ENST00000508132 SPON1Q9HCB6 807 aa11.01□□□□□ -0.65
CDH6-204ENST00000508132 CCDC9Q9Y3X0 531 aaKnown RBP11.01□□□□□ -0.65
CDH6-204ENST00000508132 ANKRD30BQ9BXX2 1392 aa11.01□□□□□ -0.65
CDH6-204ENST00000508132 SHANK3Q9BYB0 1731 aa11.01□□□□□ -0.65
CDH6-204ENST00000508132 IQGAP3Q86VI3 1631 aa11□□□□□ -0.65
CDH6-204ENST00000508132 PLEKHG3A1L390 1219 aa11□□□□□ -0.65
CDH6-204ENST00000508132 ARID5BQ14865 1188 aa11□□□□□ -0.65
CDH6-204ENST00000508132 LIMD1Q9UGP4 676 aa11□□□□□ -0.65
CDH6-204ENST00000508132 ROBO2Q9HCK4 1378 aa11□□□□□ -0.65
CDH6-204ENST00000508132 FOXO3O43524 673 aa10.99□□□□□ -0.65
CDH6-204ENST00000508132 GJA5P36382 358 aa10.99□□□□□ -0.65
CDH6-204ENST00000508132 QPCTQ16769 361 aa10.99□□□□□ -0.65
CDH6-204ENST00000508132 RIC3Q7Z5B4 369 aa10.99□□□□□ -0.65
CDH6-204ENST00000508132 FAM174AQ8TBP5 190 aa10.99□□□□□ -0.65
CDH6-204ENST00000508132 IRF7Q92985 503 aa10.99□□□□□ -0.65
CDH6-204ENST00000508132 ITPKCQ96DU7 683 aa10.99□□□□□ -0.65
CDH6-204ENST00000508132 ZBTB3Q9H5J0 574 aa10.99□□□□□ -0.65
CDH6-204ENST00000508132 TRIM37O94972 964 aa10.98□□□□□ -0.65
CDH6-204ENST00000508132 PDGFDQ9GZP0 370 aaPredicted RBP10.98□□□□□ -0.65
CDH6-204ENST00000508132 NPHP3Q7Z494 1330 aa10.98□□□□□ -0.65
CDH6-204ENST00000508132 GIGYF1O75420 1035 aaPredicted RBP10.97□□□□□ -0.65
CDH6-204ENST00000508132 ZIC2O95409 532 aaPredicted RBP10.97□□□□□ -0.65
CDH6-204ENST00000508132 NPAS3Q8IXF0 933 aa10.97□□□□□ -0.65
CDH6-204ENST00000508132 CDK15Q96Q40 435 aa10.97□□□□□ -0.65
CDH6-204ENST00000508132 TONSLQ96HA7 1378 aa10.97□□□□□ -0.65
CDH6-204ENST00000508132 ESCO1Q5FWF5 840 aa10.96□□□□□ -0.65
CDH6-204ENST00000508132 C6orf118Q5T5N4 469 aa10.96□□□□□ -0.65
CDH6-204ENST00000508132 ZSCAN1Q8NBB4 408 aa10.96□□□□□ -0.65
CDH6-204ENST00000508132 TSC1Q92574 1164 aa10.96□□□□□ -0.65
CDH6-204ENST00000508132 CDC42BPGQ6DT37 1551 aa10.95□□□□□ -0.66
CDH6-204ENST00000508132 SPATA31A3Q5VYP0 1347 aa10.95□□□□□ -0.66
CDH6-204ENST00000508132 GRM5P41594 1212 aa10.95□□□□□ -0.66
CDH6-204ENST00000508132 SCARF1Q14162 830 aa10.95□□□□□ -0.66
CDH6-204ENST00000508132 APBA3O96018 575 aa10.94□□□□□ -0.66
CDH6-204ENST00000508132 MYSM1Q5VVJ2 828 aa10.94□□□□□ -0.66
CDH6-204ENST00000508132 RGPD8O14715 1765 aaPredicted RBP10.93□□□□□ -0.66
CDH6-204ENST00000508132 PARD3Q8TEW0 1356 aa10.93□□□□□ -0.66
CDH6-204ENST00000508132 FAM83GA6ND36 823 aa10.93□□□□□ -0.66
CDH6-204ENST00000508132 AGERQ15109 404 aa10.93□□□□□ -0.66
CDH6-204ENST00000508132 PRPF38BQ5VTL8 546 aaKnown RBP10.93□□□□□ -0.66
CDH6-204ENST00000508132 DIXDC1Q155Q3 683 aa10.92□□□□□ -0.66
CDH6-204ENST00000508132 NEXMIFQ5QGS0 1516 aa10.92□□□□□ -0.66
CDH6-204ENST00000508132 L3MBTL2Q969R5 705 aa10.91□□□□□ -0.66
CDH6-204ENST00000508132 AK7Q96M32 723 aa10.91□□□□□ -0.66
CDH6-204ENST00000508132 FHDC1Q9C0D6 1143 aaPredicted RBP10.91□□□□□ -0.66
CDH6-204ENST00000508132 RTL5Q5HYW3 569 aaPredicted RBP10.9□□□□□ -0.66
CDH6-204ENST00000508132 SYT17Q9BSW7 474 aa10.9□□□□□ -0.66
CDH6-204ENST00000508132 ZBTB7AO95365 584 aa10.89□□□□□ -0.67
CDH6-204ENST00000508132 FSHRP23945 695 aa10.89□□□□□ -0.67
CDH6-204ENST00000508132 PDE4DQ08499 809 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms