RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-210ENST00000507965 ARHGEF28Q8N1W1 1705 aaKnown RBP8.31□□□□□ -1.08
ATXN3-210ENST00000507965 NRXN1Q9ULB1 1477 aa8.31□□□□□ -1.08
ATXN3-210ENST00000507965 NPHP3Q7Z494 1330 aa8.3□□□□□ -1.08
ATXN3-210ENST00000507965 SLIT2O94813 1529 aa8.3□□□□□ -1.08
ATXN3-210ENST00000507965 EP400Q96L91 3159 aa8.3□□□□□ -1.08
ATXN3-210ENST00000507965 SPDYE5A6NIY4 337 aa8.3□□□□□ -1.08
ATXN3-210ENST00000507965 MTMR2Q13614 643 aa8.3□□□□□ -1.08
ATXN3-210ENST00000507965 TMEM132EQ6IEE7 984 aa8.3□□□□□ -1.08
ATXN3-210ENST00000507965 FAM174AQ8TBP5 190 aa8.3□□□□□ -1.08
ATXN3-210ENST00000507965 STK26Q9P289 416 aa8.3□□□□□ -1.08
ATXN3-210ENST00000507965 RALGAPBQ86X10 1494 aa8.3□□□□□ -1.08
ATXN3-210ENST00000507965 ITSN1Q15811 1721 aa8.29□□□□□ -1.08
ATXN3-210ENST00000507965 MOXD2PA6NHM9 499 aa8.29□□□□□ -1.08
ATXN3-210ENST00000507965 FOXO3O43524 673 aa8.29□□□□□ -1.08
ATXN3-210ENST00000507965 CTHP32929 405 aa8.29□□□□□ -1.08
ATXN3-210ENST00000507965 RGL3Q3MIN7 710 aa8.29□□□□□ -1.08
ATXN3-210ENST00000507965 TPRNQ4KMQ1 711 aa8.29□□□□□ -1.08
ATXN3-210ENST00000507965 DESI1Q6ICB0 168 aa8.29□□□□□ -1.08
ATXN3-210ENST00000507965 FNBP4Q8N3X1 1017 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-210ENST00000507965 TRPC5Q9UL62 973 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-210ENST00000507965 ANKRD30BQ9BXX2 1392 aa8.29□□□□□ -1.08
ATXN3-210ENST00000507965 ADGRB1O14514 1584 aa8.29□□□□□ -1.08
ATXN3-210ENST00000507965 PHRF1Q9P1Y6 1649 aaKnown RBP8.29□□□□□ -1.08
ATXN3-210ENST00000507965 TNS3Q68CZ2 1445 aa8.29□□□□□ -1.08
ATXN3-210ENST00000507965 ABCC11Q96J66 1382 aa8.28□□□□□ -1.08
ATXN3-210ENST00000507965 MAN1A2O60476 641 aa8.28□□□□□ -1.08
ATXN3-210ENST00000507965 VSIG8P0DPA2 414 aa8.28□□□□□ -1.08
ATXN3-210ENST00000507965 ARID5BQ14865 1188 aa8.28□□□□□ -1.08
ATXN3-210ENST00000507965 TNS1Q9HBL0 1735 aaKnown RBP8.28□□□□□ -1.08
ATXN3-210ENST00000507965 DLC1Q96QB1 1528 aa8.28□□□□□ -1.08
ATXN3-210ENST00000507965 TOPAZ1Q8N9V7 1692 aa8.27□□□□□ -1.08
ATXN3-210ENST00000507965 LOC100996750A0A140TA64 210 aa8.27□□□□□ -1.09
ATXN3-210ENST00000507965 MPHOSPH9Q99550 1183 aa8.27□□□□□ -1.09
ATXN3-210ENST00000507965 KRTAP4-6Q9BYQ5 205 aa8.27□□□□□ -1.09
ATXN3-210ENST00000507965 COL14A1Q05707 1796 aaKnown RBP8.27□□□□□ -1.09
ATXN3-210ENST00000507965 RGPD1P0DJD0 1748 aa8.26□□□□□ -1.09
ATXN3-210ENST00000507965 ZIC2O95409 532 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-210ENST00000507965 C6orf118Q5T5N4 469 aa8.26□□□□□ -1.09
ATXN3-210ENST00000507965 KLF16Q9BXK1 252 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-210ENST00000507965 SPATA31A3Q5VYP0 1347 aa8.26□□□□□ -1.09
ATXN3-210ENST00000507965 LRP5O75197 1615 aa8.25□□□□□ -1.09
ATXN3-210ENST00000507965 TTLL12Q14166 644 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-210ENST00000507965 THSD7AQ9UPZ6 1657 aa8.24□□□□□ -1.09
ATXN3-210ENST00000507965 TULP4Q9NRJ4 1543 aa8.24□□□□□ -1.09
ATXN3-210ENST00000507965 UPP2O95045 317 aa8.24□□□□□ -1.09
ATXN3-210ENST00000507965 SAFB2Q14151 953 aaKnown RBP eCLIP8.24□□□□□ -1.09
ATXN3-210ENST00000507965 AGERQ15109 404 aa8.24□□□□□ -1.09
ATXN3-210ENST00000507965 CFAP70Q5T0N1 1121 aa8.24□□□□□ -1.09
ATXN3-210ENST00000507965 CABLES1Q8TDN4 633 aa8.24□□□□□ -1.09
ATXN3-210ENST00000507965 FOXJ1Q92949 421 aa8.24□□□□□ -1.09
ATXN3-210ENST00000507965 GJD4Q96KN9 370 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-210ENST00000507965 CDK15Q96Q40 435 aa8.24□□□□□ -1.09
ATXN3-210ENST00000507965 ZFAND3Q9H8U3 227 aa8.24□□□□□ -1.09
ATXN3-210ENST00000507965 ANKARQ7Z5J8 1434 aa8.23□□□□□ -1.09
ATXN3-210ENST00000507965 BMP2P12643 396 aa8.23□□□□□ -1.09
ATXN3-210ENST00000507965 NR5A1Q13285 461 aa8.23□□□□□ -1.09
ATXN3-210ENST00000507965 LYPD8Q6UX82 237 aa8.23□□□□□ -1.09
ATXN3-210ENST00000507965 ITPKCQ96DU7 683 aa8.23□□□□□ -1.09
ATXN3-210ENST00000507965 RAB3GAP2Q9H2M9 1393 aa8.22□□□□□ -1.09
ATXN3-210ENST00000507965 BLMP54132 1417 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-210ENST00000507965 PPFIA3O75145 1194 aa8.22□□□□□ -1.09
ATXN3-210ENST00000507965 KCNMA1Q12791 1236 aa8.22□□□□□ -1.09
ATXN3-210ENST00000507965 KRT28Q7Z3Y7 464 aa8.22□□□□□ -1.09
ATXN3-210ENST00000507965 UNC5CLQ8IV45 518 aa8.22□□□□□ -1.09
ATXN3-210ENST00000507965 PRAM1Q96QH2 718 aa8.22□□□□□ -1.09
ATXN3-210ENST00000507965 C14orf93Q9H972 538 aaKnown RBP8.22□□□□□ -1.09
ATXN3-210ENST00000507965 SBNO1A3KN83 1393 aa8.22□□□□□ -1.09
ATXN3-210ENST00000507965 DHX57Q6P158 1386 aaKnown RBP8.22□□□□□ -1.09
ATXN3-210ENST00000507965 ATP7BP35670 1465 aa8.21□□□□□ -1.09
ATXN3-210ENST00000507965 SUZ12Q15022 739 aaKnown RBP8.21□□□□□ -1.1
ATXN3-210ENST00000507965 NRKQ7Z2Y5 1582 aa8.21□□□□□ -1.1
ATXN3-210ENST00000507965 ARHGEF10O15013 1369 aa8.21□□□□□ -1.1
ATXN3-210ENST00000507965 KIAA1210Q9ULL0 1709 aa8.2□□□□□ -1.1
ATXN3-210ENST00000507965 WNK3Q9BYP7 1800 aa8.2□□□□□ -1.1
ATXN3-210ENST00000507965 DIXDC1Q155Q3 683 aa8.2□□□□□ -1.1
ATXN3-210ENST00000507965 DEFB132Q7Z7B7 95 aa8.2□□□□□ -1.1
ATXN3-210ENST00000507965 LINC00528Q8N1L1 170 aa8.2□□□□□ -1.1
ATXN3-210ENST00000507965 KCTD17Q8N5Z5 321 aa8.2□□□□□ -1.1
ATXN3-210ENST00000507965 PMFBP1Q8TBY8 1022 aa8.2□□□□□ -1.1
ATXN3-210ENST00000507965 BEGAINQ9BUH8 593 aa8.2□□□□□ -1.1
ATXN3-210ENST00000507965 HIRIP3Q9BW71 556 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-210ENST00000507965 MAP10Q9P2G4 905 aa8.2□□□□□ -1.1
ATXN3-210ENST00000507965 PRR36Q9H6K5 1346 aa8.2□□□□□ -1.1
ATXN3-210ENST00000507965 RREB1Q92766 1687 aa8.2□□□□□ -1.1
ATXN3-210ENST00000507965 QRICH2Q9H0J4 1663 aa8.2□□□□□ -1.1
ATXN3-210ENST00000507965 LMO7Q8WWI1 1683 aa8.19□□□□□ -1.1
ATXN3-210ENST00000507965 SPTLC1O15269 473 aa8.19□□□□□ -1.1
ATXN3-210ENST00000507965 NR3C2P08235 984 aa8.19□□□□□ -1.1
ATXN3-210ENST00000507965 GJA5P36382 358 aa8.19□□□□□ -1.1
ATXN3-210ENST00000507965 GIGYF2Q6Y7W6 1299 aaKnown RBP8.19□□□□□ -1.1
ATXN3-210ENST00000507965 BPHLQ86WA6 291 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-210ENST00000507965 SEPT12Q8IYM1 358 aa8.19□□□□□ -1.1
ATXN3-210ENST00000507965 SIRT1Q96EB6 747 aa8.19□□□□□ -1.1
ATXN3-210ENST00000507965 NUP188Q5SRE5 1749 aa8.19□□□□□ -1.1
ATXN3-210ENST00000507965 CFAP99D6REC4 459 aa8.18□□□□□ -1.1
ATXN3-210ENST00000507965 VPS72Q15906 364 aa8.18□□□□□ -1.1
ATXN3-210ENST00000507965 RSBN1LQ6PCB5 846 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-210ENST00000507965 TBC1D2Q9BYX2 928 aa8.18□□□□□ -1.1
ATXN3-210ENST00000507965 CCDC9Q9Y3X0 531 aaKnown RBP8.18□□□□□ -1.1
ATXN3-210ENST00000507965 FAM83GA6ND36 823 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms