RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 TNS3Q68CZ2 1445 aa17.64■□□□□ 0.42
DDX41-208ENST00000507955 MRE11P49959 708 aa17.64■□□□□ 0.41
DDX41-208ENST00000507955 TTC5Q8N0Z6 440 aa17.64■□□□□ 0.41
DDX41-208ENST00000507955 TLR7Q9NYK1 1049 aaKnown RBP17.64■□□□□ 0.41
DDX41-208ENST00000507955 EIF5BO60841 1220 aaKnown RBP17.64■□□□□ 0.41
DDX41-208ENST00000507955 SASH1O94885 1247 aa17.64■□□□□ 0.41
DDX41-208ENST00000507955 BAG4O95429 457 aaKnown RBP17.64■□□□□ 0.41
DDX41-208ENST00000507955 C5P01031 1676 aa17.63■□□□□ 0.41
DDX41-208ENST00000507955 DDX58O95786 925 aaKnown RBP17.63■□□□□ 0.41
DDX41-208ENST00000507955 CABP4P57796 275 aa17.63■□□□□ 0.41
DDX41-208ENST00000507955 MTX1Q13505 466 aa17.63■□□□□ 0.41
DDX41-208ENST00000507955 MCTP1Q6DN14 999 aa17.63■□□□□ 0.41
DDX41-208ENST00000507955 AACSQ86V21 672 aa17.63■□□□□ 0.41
DDX41-208ENST00000507955 CLASRPQ8N2M8 674 aaKnown RBP17.63■□□□□ 0.41
DDX41-208ENST00000507955 ZDHHC9Q9Y397 364 aa17.63■□□□□ 0.41
DDX41-208ENST00000507955 OVOS2A0A0G2JMS6 1433 aa17.63■□□□□ 0.41
DDX41-208ENST00000507955 COL18A1P39060 1754 aa17.63■□□□□ 0.41
DDX41-208ENST00000507955 NEURL1BA8MQ27 555 aa17.62■□□□□ 0.41
DDX41-208ENST00000507955 DCAF5Q96JK2 942 aa17.62■□□□□ 0.41
DDX41-208ENST00000507955 PRDM11Q9NQV5 511 aa17.62■□□□□ 0.41
DDX41-208ENST00000507955 TOM1L2Q6ZVM7 507 aa17.62■□□□□ 0.41
DDX41-208ENST00000507955 EAF2Q96CJ1 260 aaPredicted RBP17.62■□□□□ 0.41
DDX41-208ENST00000507955 IFIT2P09913 472 aaKnown RBP17.61■□□□□ 0.41
DDX41-208ENST00000507955 CPA1P15085 419 aa17.61■□□□□ 0.41
DDX41-208ENST00000507955 ANKRD13DQ6ZTN6 518 aa17.61■□□□□ 0.41
DDX41-208ENST00000507955 LRP10Q7Z4F1 713 aa17.61■□□□□ 0.41
DDX41-208ENST00000507955 RASEFQ8IZ41 740 aa17.61■□□□□ 0.41
DDX41-208ENST00000507955 SGSM2O43147 1006 aa17.61■□□□□ 0.41
DDX41-208ENST00000507955 GCKRQ14397 625 aa17.61■□□□□ 0.41
DDX41-208ENST00000507955 CNTROBQ8N137 903 aa17.61■□□□□ 0.41
DDX41-208ENST00000507955 DDX54Q8TDD1 881 aaKnown RBP17.61■□□□□ 0.41
DDX41-208ENST00000507955 AOX1Q06278 1338 aa17.61■□□□□ 0.41
DDX41-208ENST00000507955 ZNF335Q9H4Z2 1342 aaPredicted RBP17.61■□□□□ 0.41
DDX41-208ENST00000507955 SNRPA1P09661 255 aaKnown RBP17.6■□□□□ 0.41
DDX41-208ENST00000507955 MCCP23508 829 aa17.6■□□□□ 0.41
DDX41-208ENST00000507955 HSP90AB4PQ58FF6 505 aa17.6■□□□□ 0.41
DDX41-208ENST00000507955 LARP1Q6PKG0 1096 aaKnown RBP17.6■□□□□ 0.41
DDX41-208ENST00000507955 DNAJC5Q9H3Z4 198 aa17.6■□□□□ 0.41
DDX41-208ENST00000507955 STRN4Q9NRL3 753 aa17.6■□□□□ 0.41
DDX41-208ENST00000507955 SCN11AQ9UI33 1791 aa17.6■□□□□ 0.41
DDX41-208ENST00000507955 FOXD4L6Q3SYB3 417 aaPredicted RBP17.6■□□□□ 0.41
DDX41-208ENST00000507955 FOXD4L3Q6VB84 417 aaPredicted RBP17.6■□□□□ 0.41
DDX41-208ENST00000507955 CYP2E1P05181 493 aaPredicted RBP17.59■□□□□ 0.41
DDX41-208ENST00000507955 NEXNQ0ZGT2 675 aa17.59■□□□□ 0.41
DDX41-208ENST00000507955 UBE3BQ7Z3V4 1068 aa17.59■□□□□ 0.41
DDX41-208ENST00000507955 METTL22Q9BUU2 404 aaPredicted RBP17.59■□□□□ 0.41
DDX41-208ENST00000507955 ECHDC1Q9NTX5 307 aa17.59■□□□□ 0.41
DDX41-208ENST00000507955 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.59■□□□□ 0.413e-6■■■■□ 26.5
DDX41-208ENST00000507955 ADAMTS7Q9UKP4 1686 aa17.59■□□□□ 0.41
DDX41-208ENST00000507955 NDUFB9Q9Y6M9 179 aa17.59■□□□□ 0.41
DDX41-208ENST00000507955 HSPA4P34932 840 aa17.58■□□□□ 0.41
DDX41-208ENST00000507955 PTH1RQ03431 593 aa17.58■□□□□ 0.41
DDX41-208ENST00000507955 G3BP1Q13283 466 aaKnown RBP eCLIP17.58■□□□□ 0.41
DDX41-208ENST00000507955 FMNL2Q96PY5 1086 aa17.58■□□□□ 0.41
DDX41-208ENST00000507955 LSG1Q9H089 658 aaKnown RBP17.58■□□□□ 0.41
DDX41-208ENST00000507955 GLRX3O76003 335 aaKnown RBP17.58■□□□□ 0.4
DDX41-208ENST00000507955 CCDC9Q9Y3X0 531 aaKnown RBP17.58■□□□□ 0.4
DDX41-208ENST00000507955 CRYBG1Q9Y4K1 1723 aa17.58■□□□□ 0.4
DDX41-208ENST00000507955 EDC3Q96F86 508 aaKnown RBP17.57■□□□□ 0.4
DDX41-208ENST00000507955 BOLA2Q9H3K6 86 aa17.57■□□□□ 0.4
DDX41-208ENST00000507955 SLAIN2Q9P270 581 aa17.57■□□□□ 0.4
DDX41-208ENST00000507955 DCCP43146 1447 aa17.57■□□□□ 0.4
DDX41-208ENST00000507955 UTYO14607 1347 aa17.57■□□□□ 0.4
DDX41-208ENST00000507955 NCLP19338 710 aaKnown RBP17.57■□□□□ 0.4
DDX41-208ENST00000507955 SNX14Q9Y5W7 946 aa17.57■□□□□ 0.4
DDX41-208ENST00000507955 DDX49Q9Y6V7 483 aaKnown RBP17.57■□□□□ 0.4
DDX41-208ENST00000507955 ERBB4Q15303 1308 aa17.56■□□□□ 0.4
DDX41-208ENST00000507955 NBPF26B4DH59 902 aa17.56■□□□□ 0.4
DDX41-208ENST00000507955 NUCB2P80303 420 aa17.56■□□□□ 0.4
DDX41-208ENST00000507955 COL9A3Q14050 684 aaPredicted RBP17.56■□□□□ 0.4
DDX41-208ENST00000507955 NBPF14Q5TI25 921 aa17.56■□□□□ 0.4
DDX41-208ENST00000507955 NBPF10Q6P3W6 841 aaKnown RBP17.56■□□□□ 0.4
DDX41-208ENST00000507955 NBPF15Q8N660 670 aa17.56■□□□□ 0.4
DDX41-208ENST00000507955 FAM227BQ96M60 508 aa17.56■□□□□ 0.4
DDX41-208ENST00000507955 DIAPH3Q9NSV4 1193 aa17.56■□□□□ 0.4
DDX41-208ENST00000507955 A1BGP04217 495 aa17.56■□□□□ 0.4
DDX41-208ENST00000507955 TTC41PQ6P2S7 1318 aa17.56■□□□□ 0.4
DDX41-208ENST00000507955 RAD50Q92878 1312 aa17.56■□□□□ 0.4
DDX41-208ENST00000507955 CHGBP05060 677 aa17.55■□□□□ 0.4
DDX41-208ENST00000507955 TTLL7Q6ZT98 887 aa17.55■□□□□ 0.4
DDX41-208ENST00000507955 PRPF40AO75400 957 aaKnown RBP17.55■□□□□ 0.4
DDX41-208ENST00000507955 ANAPC15P60006 121 aa17.55■□□□□ 0.4
DDX41-208ENST00000507955 CLEC17AQ6ZS10 378 aa17.55■□□□□ 0.4
DDX41-208ENST00000507955 ZCRB1Q8TBF4 217 aaKnown RBP17.55■□□□□ 0.4
DDX41-208ENST00000507955 A0A087WZG4 1122 aa17.54■□□□□ 0.4
DDX41-208ENST00000507955 CWC22Q9HCG8 908 aaKnown RBP17.54■□□□□ 0.4
DDX41-208ENST00000507955 USP42Q9H9J4 1324 aaKnown RBP17.54■□□□□ 0.4
DDX41-208ENST00000507955 XIRP1Q702N8 1843 aaKnown RBP17.54■□□□□ 0.4
DDX41-208ENST00000507955 CLCN1P35523 988 aa17.54■□□□□ 0.4
DDX41-208ENST00000507955 SKOR2Q2VWA4 1001 aaPredicted RBP17.54■□□□□ 0.4
DDX41-208ENST00000507955 ADCK5Q3MIX3 580 aa17.54■□□□□ 0.4
DDX41-208ENST00000507955 KIAA1211Q6ZU35 1233 aa17.54■□□□□ 0.4
DDX41-208ENST00000507955 ISY1Q9ULR0 285 aaKnown RBP17.54■□□□□ 0.4
DDX41-208ENST00000507955 LMBRD1Q9NUN5 540 aa17.53■□□□□ 0.4
DDX41-208ENST00000507955 WDR17Q8IZU2 1322 aa17.53■□□□□ 0.4
DDX41-208ENST00000507955 GOLGA6L22H0YM25 854 aa17.53■□□□□ 0.4
DDX41-208ENST00000507955 PRPF40BQ6NWY9 871 aaKnown RBP17.53■□□□□ 0.4
DDX41-208ENST00000507955 ERC1Q8IUD2 1116 aa17.53■□□□□ 0.4
DDX41-208ENST00000507955 ZNF330Q9Y3S2 320 aaPredicted RBP17.53■□□□□ 0.4
DDX41-208ENST00000507955 CPDO75976 1380 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms