RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 CLP1Q92989 425 aaKnown RBP9.38□□□□□ -0.91
CLCN3-206ENST00000507875 POGKQ9P215 609 aa9.38□□□□□ -0.91
CLCN3-206ENST00000507875 TOPAZ1Q8N9V7 1692 aa9.38□□□□□ -0.91
CLCN3-206ENST00000507875 CLDN10P78369 228 aa9.38□□□□□ -0.91
CLCN3-206ENST00000507875 FUT2Q10981 343 aa9.38□□□□□ -0.91
CLCN3-206ENST00000507875 DPYDQ12882 1025 aa9.38□□□□□ -0.91
CLCN3-206ENST00000507875 LDLRAD1Q5T700 205 aa9.38□□□□□ -0.91
CLCN3-206ENST00000507875 TATDN2Q93075 761 aa9.38□□□□□ -0.91
CLCN3-206ENST00000507875 PRIMPOLQ96LW4 560 aa9.38□□□□□ -0.91
CLCN3-206ENST00000507875 ANKRD26Q9UPS8 1709 aa9.37□□□□□ -0.91
CLCN3-206ENST00000507875 AKAP12Q02952 1782 aa9.37□□□□□ -0.91
CLCN3-206ENST00000507875 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.37□□□□□ -0.91
CLCN3-206ENST00000507875 FAM200AQ8TCP9 573 aa9.37□□□□□ -0.91
CLCN3-206ENST00000507875 PSMD1Q99460 953 aa9.37□□□□□ -0.91
CLCN3-206ENST00000507875 KIAA1024Q9UPX6 916 aa9.37□□□□□ -0.91
CLCN3-206ENST00000507875 NKTRP30414 1462 aaKnown RBP9.36□□□□□ -0.91
CLCN3-206ENST00000507875 PROX2Q3B8N5 592 aa9.36□□□□□ -0.91
CLCN3-206ENST00000507875 DPH6Q7L8W6 267 aa9.36□□□□□ -0.91
CLCN3-206ENST00000507875 UBXN4Q92575 508 aa9.36□□□□□ -0.91
CLCN3-206ENST00000507875 FMN2Q9NZ56 1722 aa9.36□□□□□ -0.91
CLCN3-206ENST00000507875 PTPRUQ92729 1446 aa9.36□□□□□ -0.91
CLCN3-206ENST00000507875 NCOA3Q9Y6Q9 1424 aa9.36□□□□□ -0.91
CLCN3-206ENST00000507875 ATP7BP35670 1465 aa9.36□□□□□ -0.91
CLCN3-206ENST00000507875 ERCC5P28715 1186 aaPredicted RBP9.36□□□□□ -0.91
CLCN3-206ENST00000507875 ASTLQ6HA08 431 aaPredicted RBP9.36□□□□□ -0.91
CLCN3-206ENST00000507875 PRAM1Q96QH2 718 aa9.36□□□□□ -0.91
CLCN3-206ENST00000507875 SEPT3Q9UH03 358 aa9.36□□□□□ -0.91
CLCN3-206ENST00000507875 TMEM94Q12767 1356 aa9.35□□□□□ -0.91
CLCN3-206ENST00000507875 RBM10P98175 930 aaKnown RBP9.35□□□□□ -0.91
CLCN3-206ENST00000507875 HDLBPQ00341 1268 aaKnown RBP9.35□□□□□ -0.91
CLCN3-206ENST00000507875 EVX2Q03828 476 aa9.35□□□□□ -0.91
CLCN3-206ENST00000507875 RALBP1Q15311 655 aa9.35□□□□□ -0.91
CLCN3-206ENST00000507875 CDC42BPGQ6DT37 1551 aa9.35□□□□□ -0.91
CLCN3-206ENST00000507875 STRCP1A6NGW2 1772 aa9.35□□□□□ -0.91
CLCN3-206ENST00000507875 MAPK1P28482 360 aa9.34□□□□□ -0.91
CLCN3-206ENST00000507875 IER5LQ5T953 404 aa9.34□□□□□ -0.91
CLCN3-206ENST00000507875 MON2Q7Z3U7 1717 aa9.34□□□□□ -0.91
CLCN3-206ENST00000507875 KIF20BQ96Q89 1820 aa9.34□□□□□ -0.91
CLCN3-206ENST00000507875 HSPA1LP34931 641 aa9.34□□□□□ -0.91
CLCN3-206ENST00000507875 CNPY4Q8N129 248 aa9.34□□□□□ -0.91
CLCN3-206ENST00000507875 STK26Q9P289 416 aa9.34□□□□□ -0.91
CLCN3-206ENST00000507875 MSH6P52701 1360 aa9.34□□□□□ -0.91
CLCN3-206ENST00000507875 NR1H3Q13133 447 aa9.33□□□□□ -0.92
CLCN3-206ENST00000507875 ANKMY2Q8IV38 441 aa9.33□□□□□ -0.92
CLCN3-206ENST00000507875 MKNK1Q9BUB5 465 aa9.33□□□□□ -0.92
CLCN3-206ENST00000507875 NSD2O96028 1365 aa9.33□□□□□ -0.92
CLCN3-206ENST00000507875 ANKRD36BQ8N2N9 1353 aa9.33□□□□□ -0.92
CLCN3-206ENST00000507875 ANKARQ7Z5J8 1434 aa9.33□□□□□ -0.92
CLCN3-206ENST00000507875 ANKRD62A6NC57 917 aa9.33□□□□□ -0.92
CLCN3-206ENST00000507875 NALCNQ8IZF0 1738 aa9.32□□□□□ -0.92
CLCN3-206ENST00000507875 ROBO2Q9HCK4 1378 aa9.32□□□□□ -0.92
CLCN3-206ENST00000507875 OGFOD1Q8N543 542 aa9.32□□□□□ -0.92
CLCN3-206ENST00000507875 WASLO00401 505 aaPredicted RBP9.32□□□□□ -0.92
CLCN3-206ENST00000507875 CLSTN1O94985 981 aa9.32□□□□□ -0.92
CLCN3-206ENST00000507875 VAMP1P23763 118 aa9.32□□□□□ -0.92
CLCN3-206ENST00000507875 RAD51AP2Q09MP3 1159 aa9.32□□□□□ -0.92
CLCN3-206ENST00000507875 OCLNQ16625 522 aa9.32□□□□□ -0.92
CLCN3-206ENST00000507875 PRKRIP1Q9H875 184 aaPredicted RBP9.32□□□□□ -0.92
CLCN3-206ENST00000507875 PARD3Q8TEW0 1356 aa9.31□□□□□ -0.92
CLCN3-206ENST00000507875 PURBQ96QR8 312 aaKnown RBP9.31□□□□□ -0.92
CLCN3-206ENST00000507875 PANK3Q9H999 370 aa9.31□□□□□ -0.92
CLCN3-206ENST00000507875 KNSTRNQ9Y448 316 aa9.31□□□□□ -0.92
CLCN3-206ENST00000507875 BRD4O60885 1362 aaPredicted RBP9.31□□□□□ -0.92
CLCN3-206ENST00000507875 ARHGAP4P98171 946 aa9.3□□□□□ -0.92
CLCN3-206ENST00000507875 DHX38Q92620 1227 aaKnown RBP9.3□□□□□ -0.92
CLCN3-206ENST00000507875 CDK19Q9BWU1 502 aa9.3□□□□□ -0.92
CLCN3-206ENST00000507875 TERF2IPQ9NYB0 399 aa9.3□□□□□ -0.92
CLCN3-206ENST00000507875 PLEKHH1Q9ULM0 1364 aa9.3□□□□□ -0.92
CLCN3-206ENST00000507875 SEC24BO95487 1268 aa9.3□□□□□ -0.92
CLCN3-206ENST00000507875 USP46P62068 366 aa9.3□□□□□ -0.92
CLCN3-206ENST00000507875 LARP1Q6PKG0 1096 aaKnown RBP9.3□□□□□ -0.92
CLCN3-206ENST00000507875 PLEKHM2Q8IWE5 1019 aa9.3□□□□□ -0.92
CLCN3-206ENST00000507875 USP54Q70EL1 1684 aa9.3□□□□□ -0.92
CLCN3-206ENST00000507875 KIF1AQ12756 1690 aa9.29□□□□□ -0.92
CLCN3-206ENST00000507875 ARSIQ5FYB1 569 aa9.29□□□□□ -0.92
CLCN3-206ENST00000507875 DNMT3AQ9Y6K1 912 aaPredicted RBP9.29□□□□□ -0.92
CLCN3-206ENST00000507875 ADGRL3Q9HAR2 1447 aa9.29□□□□□ -0.92
CLCN3-206ENST00000507875 CGNL1Q0VF96 1302 aa9.29□□□□□ -0.92
CLCN3-206ENST00000507875 ZBBXA8MT70 800 aa9.29□□□□□ -0.92
CLCN3-206ENST00000507875 DKK1O94907 266 aa9.29□□□□□ -0.92
CLCN3-206ENST00000507875 ATF3P18847 181 aa9.29□□□□□ -0.92
CLCN3-206ENST00000507875 C3orf67Q6ZVT6 689 aa9.29□□□□□ -0.92
CLCN3-206ENST00000507875 GLYCTKQ8IVS8 523 aa9.29□□□□□ -0.92
CLCN3-206ENST00000507875 PIK3R5Q8WYR1 880 aa9.29□□□□□ -0.92
CLCN3-206ENST00000507875 C19orf44Q9H6X5 657 aa9.29□□□□□ -0.92
CLCN3-206ENST00000507875 MAP10Q9P2G4 905 aa9.29□□□□□ -0.92
CLCN3-206ENST00000507875 DCCP43146 1447 aa9.29□□□□□ -0.92
CLCN3-206ENST00000507875 NRKQ7Z2Y5 1582 aa9.29□□□□□ -0.92
CLCN3-206ENST00000507875 INSRP06213 1382 aa9.29□□□□□ -0.92
CLCN3-206ENST00000507875 MYBBP1AQ9BQG0 1328 aaKnown RBP9.28□□□□□ -0.92
CLCN3-206ENST00000507875 SLFNL1Q499Z3 407 aa9.28□□□□□ -0.92
CLCN3-206ENST00000507875 HDGFL2Q7Z4V5 671 aaPredicted RBP9.28□□□□□ -0.92
CLCN3-206ENST00000507875 WAPLQ7Z5K2 1190 aa9.28□□□□□ -0.92
CLCN3-206ENST00000507875 SALL2Q9Y467 1007 aaPredicted RBP9.28□□□□□ -0.92
CLCN3-206ENST00000507875 CPSF1Q10570 1443 aaKnown RBP9.28□□□□□ -0.92
CLCN3-206ENST00000507875 SWT1Q5T5J6 900 aaKnown RBP9.28□□□□□ -0.92
CLCN3-206ENST00000507875 LNPKQ9C0E8 428 aa9.28□□□□□ -0.92
CLCN3-206ENST00000507875 RGPD8O14715 1765 aaPredicted RBP9.28□□□□□ -0.92
CLCN3-206ENST00000507875 CD163L1Q9NR16 1453 aa9.28□□□□□ -0.92
CLCN3-206ENST00000507875 XIRP1Q702N8 1843 aaKnown RBP9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms