RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 EPHX2P34913 555 aa18.93■□□□□ 0.62
DDR1-260ENST00000507533 TTC5Q8N0Z6 440 aa18.93■□□□□ 0.62
DDR1-260ENST00000507533 CNTROBQ8N137 903 aa18.93■□□□□ 0.62
DDR1-260ENST00000507533 COL11A2P13942 1736 aaPredicted RBP18.93■□□□□ 0.62
DDR1-260ENST00000507533 ZNF541Q9H0D2 1346 aa18.93■□□□□ 0.62
DDR1-260ENST00000507533 CCDC93Q567U6 631 aa18.92■□□□□ 0.62
DDR1-260ENST00000507533 MAP1SQ66K74 1059 aaPredicted RBP18.92■□□□□ 0.62
DDR1-260ENST00000507533 PNMA8AQ86V59 439 aaPredicted RBP18.92■□□□□ 0.62
DDR1-260ENST00000507533 C7orf43Q8WVR3 580 aa18.92■□□□□ 0.62
DDR1-260ENST00000507533 ABT1Q9ULW3 272 aaKnown RBP18.92■□□□□ 0.62
DDR1-260ENST00000507533 VIRMAQ69YN4 1812 aaKnown RBP18.91■□□□□ 0.62
DDR1-260ENST00000507533 HMOX1P09601 288 aa18.91■□□□□ 0.62
DDR1-260ENST00000507533 IL6STP40189 918 aaPredicted RBP18.91■□□□□ 0.62
DDR1-260ENST00000507533 MTHFSDQ2M296 383 aaKnown RBP18.91■□□□□ 0.62
DDR1-260ENST00000507533 SCN4AP35499 1836 aa18.9■□□□□ 0.62
DDR1-260ENST00000507533 SLX4Q8IY92 1834 aa18.9■□□□□ 0.62
DDR1-260ENST00000507533 RGS19P49795 217 aa18.9■□□□□ 0.62
DDR1-260ENST00000507533 FKBP4Q02790 459 aaKnown RBP eCLIP18.9■□□□□ 0.62
DDR1-260ENST00000507533 NPM2Q86SE8 214 aaKnown RBP18.9■□□□□ 0.62
DDR1-260ENST00000507533 TEX13AQ9BXU3 409 aaPredicted RBP18.9■□□□□ 0.62
DDR1-260ENST00000507533 ZNF277Q9NRM2 450 aaPredicted RBP18.9■□□□□ 0.62
DDR1-260ENST00000507533 CAMTA2O94983 1202 aa18.89■□□□□ 0.61
DDR1-260ENST00000507533 ZNF496Q96IT1 587 aaPredicted RBP18.89■□□□□ 0.61
DDR1-260ENST00000507533 BEGAINQ9BUH8 593 aa18.88■□□□□ 0.61
DDR1-260ENST00000507533 RNF123Q5XPI4 1314 aa18.88■□□□□ 0.61
DDR1-260ENST00000507533 NPR1P16066 1061 aa18.87■□□□□ 0.61
DDR1-260ENST00000507533 PCGF6Q9BYE7 350 aa18.87■□□□□ 0.61
DDR1-260ENST00000507533 HEG1Q9ULI3 1381 aa18.87■□□□□ 0.61
DDR1-260ENST00000507533 SCN7AQ01118 1682 aa18.86■□□□□ 0.61
DDR1-260ENST00000507533 A1BGP04217 495 aa18.86■□□□□ 0.61
DDR1-260ENST00000507533 ZNF790Q6PG37 636 aa18.86■□□□□ 0.61
DDR1-260ENST00000507533 DDX21Q9NR30 783 aaKnown RBP eCLIP18.86■□□□□ 0.61
DDR1-260ENST00000507533 FZD9O00144 591 aa18.85■□□□□ 0.61
DDR1-260ENST00000507533 OLFM4Q6UX06 510 aa18.85■□□□□ 0.61
DDR1-260ENST00000507533 PAXIP1Q6ZW49 1069 aaPredicted RBP18.85■□□□□ 0.61
DDR1-260ENST00000507533 NBPF5PQ86XG9 351 aaPredicted RBP18.85■□□□□ 0.61
DDR1-260ENST00000507533 RTKN2Q8IZC4 609 aa18.85■□□□□ 0.61
DDR1-260ENST00000507533 CAPNS2Q96L46 248 aa18.85■□□□□ 0.61
DDR1-260ENST00000507533 ADAMTSL1Q8N6G6 1762 aa18.85■□□□□ 0.61
DDR1-260ENST00000507533 UBR2Q8IWV8 1755 aa18.84■□□□□ 0.61
DDR1-260ENST00000507533 IARSP41252 1262 aaKnown RBP18.84■□□□□ 0.61
DDR1-260ENST00000507533 ECE1P42892 770 aa18.84■□□□□ 0.61
DDR1-260ENST00000507533 TEFQ10587 303 aa18.84■□□□□ 0.61
DDR1-260ENST00000507533 GRM1Q13255 1194 aa18.84■□□□□ 0.61
DDR1-260ENST00000507533 DZIP3Q86Y13 1208 aaKnown RBP18.84■□□□□ 0.61
DDR1-260ENST00000507533 GPC2Q8N158 579 aa18.84■□□□□ 0.61
DDR1-260ENST00000507533 GPR101Q96P66 508 aaPredicted RBP18.84■□□□□ 0.61
DDR1-260ENST00000507533 CYP4F22Q6NT55 531 aa18.83■□□□□ 0.6
DDR1-260ENST00000507533 SYNE4Q8N205 404 aa18.83■□□□□ 0.6
DDR1-260ENST00000507533 KNSTRNQ9Y448 316 aa18.83■□□□□ 0.6
DDR1-260ENST00000507533 KLRG2A4D1S0 409 aaPredicted RBP18.82■□□□□ 0.6
DDR1-260ENST00000507533 FMR1Q06787 632 aaKnown RBP eCLIP18.82■□□□□ 0.63e-7■■■□□ 15.5
DDR1-260ENST00000507533 CFAP44Q96MT7 982 aa18.82■□□□□ 0.6
DDR1-260ENST00000507533 FMNL2Q96PY5 1086 aa18.82■□□□□ 0.6
DDR1-260ENST00000507533 CACNA1SQ13698 1873 aa18.82■□□□□ 0.6
DDR1-260ENST00000507533 ARFGEF2Q9Y6D5 1785 aa18.81■□□□□ 0.6
DDR1-260ENST00000507533 IL17REQ8NFR9 667 aa18.81■□□□□ 0.6
DDR1-260ENST00000507533 TSKSQ9UJT2 592 aa18.81■□□□□ 0.6
DDR1-260ENST00000507533 GJA3Q9Y6H8 435 aa18.81■□□□□ 0.6
DDR1-260ENST00000507533 CLEC4GQ6UXB4 293 aa18.8■□□□□ 0.6
DDR1-260ENST00000507533 JDP2Q8WYK2 163 aa18.8■□□□□ 0.6
DDR1-260ENST00000507533 LMOD1P29536 600 aaPredicted RBP18.79■□□□□ 0.6
DDR1-260ENST00000507533 ALDH1B1P30837 517 aa18.79■□□□□ 0.6
DDR1-260ENST00000507533 EIF6P56537 245 aaKnown RBP18.79■□□□□ 0.6
DDR1-260ENST00000507533 TPTE2Q6XPS3 522 aa18.79■□□□□ 0.6
DDR1-260ENST00000507533 ZNF652Q9Y2D9 606 aa18.79■□□□□ 0.6
DDR1-260ENST00000507533 GNAT3A8MTJ3 354 aa18.78■□□□□ 0.6
DDR1-260ENST00000507533 DIAPH1O60610 1272 aaKnown RBP18.78■□□□□ 0.6
DDR1-260ENST00000507533 PIP4K2AP48426 406 aaPredicted RBP18.78■□□□□ 0.6
DDR1-260ENST00000507533 CST9Q5W186 159 aa18.78■□□□□ 0.6
DDR1-260ENST00000507533 MCOLN1Q9GZU1 580 aa18.78■□□□□ 0.6
DDR1-260ENST00000507533 AOC2O75106 756 aa18.77■□□□□ 0.6
DDR1-260ENST00000507533 MAP2K2P36507 400 aa18.77■□□□□ 0.6
DDR1-260ENST00000507533 TIMELESSQ9UNS1 1208 aa18.77■□□□□ 0.6
DDR1-260ENST00000507533 USP16Q9Y5T5 823 aa18.77■□□□□ 0.6
DDR1-260ENST00000507533 TLL2Q9Y6L7 1015 aa18.77■□□□□ 0.6
DDR1-260ENST00000507533 THSD7BQ9C0I4 1608 aa18.76■□□□□ 0.59
DDR1-260ENST00000507533 FAM177BA6PVY3 158 aa18.76■□□□□ 0.59
DDR1-260ENST00000507533 TRAF5O00463 557 aa18.76■□□□□ 0.59
DDR1-260ENST00000507533 KCNQ3O43525 872 aa18.76■□□□□ 0.59
DDR1-260ENST00000507533 EPS15P42566 896 aa18.76■□□□□ 0.59
DDR1-260ENST00000507533 EIF4G2P78344 907 aaKnown RBP eCLIP18.76■□□□□ 0.598e-8■■■■■ 39.6
DDR1-260ENST00000507533 PSMD1Q99460 953 aa18.76■□□□□ 0.59
DDR1-260ENST00000507533 NIP7Q9Y221 180 aaKnown RBP eCLIP18.76■□□□□ 0.59
DDR1-260ENST00000507533 HSPA5P11021 654 aaKnown RBP18.75■□□□□ 0.59
DDR1-260ENST00000507533 AMER1Q5JTC6 1135 aaPredicted RBP18.75■□□□□ 0.59
DDR1-260ENST00000507533 GAS2L2Q8NHY3 880 aa18.75■□□□□ 0.59
DDR1-260ENST00000507533 BTBD11A6QL63 1104 aa18.74■□□□□ 0.59
DDR1-260ENST00000507533 CA12O43570 354 aa18.74■□□□□ 0.59
DDR1-260ENST00000507533 SCNN1DP51172 638 aa18.74■□□□□ 0.59
DDR1-260ENST00000507533 USP50Q70EL3 339 aaPredicted RBP18.74■□□□□ 0.59
DDR1-260ENST00000507533 GTF2E1P29083 439 aaPredicted RBP18.73■□□□□ 0.59
DDR1-260ENST00000507533 BCORQ6W2J9 1755 aa18.73■□□□□ 0.59
DDR1-260ENST00000507533 PRAMEF22A3QJZ6 481 aa18.72■□□□□ 0.59
DDR1-260ENST00000507533 CC2D2BQ6DHV5 1058 aa18.72■□□□□ 0.59
DDR1-260ENST00000507533 DGKZQ13574 1117 aa18.71■□□□□ 0.59
DDR1-260ENST00000507533 LARGE2Q8N3Y3 721 aa18.71■□□□□ 0.59
DDR1-260ENST00000507533 SNED1Q8TER0 1413 aa18.71■□□□□ 0.59
DDR1-260ENST00000507533 LTBP1Q14766 1721 aa18.71■□□□□ 0.59
DDR1-260ENST00000507533 U2SURPO15042 1029 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms