RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 PLVAPQ9BX97 442 aa6.38□□□□□ -1.39
HMGB3P15-201ENST00000507326 ELOA3CA0A087WX78 387 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P15-201ENST00000507326 SERTM1A2A2V5 107 aa6.37□□□□□ -1.39
HMGB3P15-201ENST00000507326 ELOA3DA6NLF2 546 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P15-201ENST00000507326 POM121CA8CG34 1229 aa6.37□□□□□ -1.39
HMGB3P15-201ENST00000507326 RAD21O60216 631 aa6.37□□□□□ -1.39
HMGB3P15-201ENST00000507326 SFSWAPQ12872 951 aaKnown RBP6.37□□□□□ -1.39
HMGB3P15-201ENST00000507326 ELOA3BQ3SY89 546 aa6.37□□□□□ -1.39
HMGB3P15-201ENST00000507326 ELOA3Q8NG57 546 aa6.37□□□□□ -1.39
HMGB3P15-201ENST00000507326 RHPN1Q8TCX5 695 aa6.37□□□□□ -1.39
HMGB3P15-201ENST00000507326 KIAA1024Q9UPX6 916 aa6.37□□□□□ -1.39
HMGB3P15-201ENST00000507326 ALAS2P22557 587 aa6.36□□□□□ -1.39
HMGB3P15-201ENST00000507326 DOC2BQ14184 412 aa6.36□□□□□ -1.39
HMGB3P15-201ENST00000507326 TRIM50Q86XT4 487 aa6.36□□□□□ -1.39
HMGB3P15-201ENST00000507326 ADAMTS19Q8TE59 1207 aa6.36□□□□□ -1.39
HMGB3P15-201ENST00000507326 USP17L3A6NCW0 530 aa6.35□□□□□ -1.39
HMGB3P15-201ENST00000507326 USP17L4A6NCW7 530 aa6.35□□□□□ -1.39
HMGB3P15-201ENST00000507326 ZBTB7BO15156 539 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P15-201ENST00000507326 CCDC102BQ68D86 513 aa6.35□□□□□ -1.39
HMGB3P15-201ENST00000507326 USP17L2Q6R6M4 530 aa6.35□□□□□ -1.39
HMGB3P15-201ENST00000507326 USP17L1Q7RTZ2 530 aa6.35□□□□□ -1.39
HMGB3P15-201ENST00000507326 C7orf43Q8WVR3 580 aa6.35□□□□□ -1.39
HMGB3P15-201ENST00000507326 SLC30A3Q99726 388 aa6.35□□□□□ -1.39
HMGB3P15-201ENST00000507326 HCN4Q9Y3Q4 1203 aa6.35□□□□□ -1.39
HMGB3P15-201ENST00000507326 SIN3BO75182 1162 aa6.34□□□□□ -1.39
HMGB3P15-201ENST00000507326 SPATA31C1P0DKV0 1188 aa6.34□□□□□ -1.39
HMGB3P15-201ENST00000507326 ATP1A2P50993 1020 aa6.34□□□□□ -1.39
HMGB3P15-201ENST00000507326 PSMA6P60900 246 aaKnown RBP6.34□□□□□ -1.39
HMGB3P15-201ENST00000507326 CLDN10P78369 228 aa6.34□□□□□ -1.39
HMGB3P15-201ENST00000507326 PLEKHM2Q8IWE5 1019 aa6.34□□□□□ -1.39
HMGB3P15-201ENST00000507326 HSH2DQ96JZ2 352 aa6.34□□□□□ -1.39
HMGB3P15-201ENST00000507326 MDFIQ99750 246 aa6.34□□□□□ -1.39
HMGB3P15-201ENST00000507326 TSPAN10Q9H1Z9 355 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P15-201ENST00000507326 GPC6Q9Y625 555 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P15-201ENST00000507326 TTBK1Q5TCY1 1321 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P15-201ENST00000507326 UBTFP17480 764 aaKnown RBP6.33□□□□□ -1.4
HMGB3P15-201ENST00000507326 GATA4P43694 442 aa6.33□□□□□ -1.4
HMGB3P15-201ENST00000507326 HDGFL1Q5TGJ6 251 aa6.33□□□□□ -1.4
HMGB3P15-201ENST00000507326 RAB44Q7Z6P3 723 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P15-201ENST00000507326 Q8N3U1 123 aa6.33□□□□□ -1.4
HMGB3P15-201ENST00000507326 CEP63Q96MT8 703 aa6.33□□□□□ -1.4
HMGB3P15-201ENST00000507326 UCN2Q96RP3 112 aa6.33□□□□□ -1.4
HMGB3P15-201ENST00000507326 PHACTR1Q9C0D0 580 aa6.33□□□□□ -1.4
HMGB3P15-201ENST00000507326 SPDYE3A6NKU9 549 aa6.32□□□□□ -1.4
HMGB3P15-201ENST00000507326 SFI1A8K8P3 1242 aa6.32□□□□□ -1.4
HMGB3P15-201ENST00000507326 ADARB2-AS1A8MUL3 147 aa6.32□□□□□ -1.4
HMGB3P15-201ENST00000507326 M0R082 166 aa6.32□□□□□ -1.4
HMGB3P15-201ENST00000507326 SPEM2Q0P670 501 aa6.32□□□□□ -1.4
HMGB3P15-201ENST00000507326 PRRT3Q5FWE3 981 aa6.32□□□□□ -1.4
HMGB3P15-201ENST00000507326 HOMEZQ8IX15 550 aa6.32□□□□□ -1.4
HMGB3P15-201ENST00000507326 OGFOD1Q8N543 542 aa6.32□□□□□ -1.4
HMGB3P15-201ENST00000507326 ZNF417Q8TAU3 575 aa6.32□□□□□ -1.4
HMGB3P15-201ENST00000507326 ZNF587Q96SQ5 575 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P15-201ENST00000507326 SEMA6BQ9H3T3 888 aa6.32□□□□□ -1.4
HMGB3P15-201ENST00000507326 BRD7Q9NPI1 651 aa6.32□□□□□ -1.4
HMGB3P15-201ENST00000507326 MKRN1Q9UHC7 482 aaKnown RBP6.32□□□□□ -1.4
HMGB3P15-201ENST00000507326 CHMP3Q9Y3E7 222 aa6.32□□□□□ -1.4
HMGB3P15-201ENST00000507326 FAM229AH3BQW9 127 aa6.31□□□□□ -1.4
HMGB3P15-201ENST00000507326 ATP9BO43861 1147 aa6.31□□□□□ -1.4
HMGB3P15-201ENST00000507326 ALBP02768 609 aa6.31□□□□□ -1.4
HMGB3P15-201ENST00000507326 ADH7P40394 386 aa6.31□□□□□ -1.4
HMGB3P15-201ENST00000507326 FLIIQ13045 1269 aa6.31□□□□□ -1.4
HMGB3P15-201ENST00000507326 C1orf53Q5VUE5 145 aa6.31□□□□□ -1.4
HMGB3P15-201ENST00000507326 C8orf86Q6ZUL3 223 aa6.31□□□□□ -1.4
HMGB3P15-201ENST00000507326 TSEN2Q8NCE0 465 aaKnown RBP6.31□□□□□ -1.4
HMGB3P15-201ENST00000507326 ZNF280CQ8ND82 737 aa6.31□□□□□ -1.4
HMGB3P15-201ENST00000507326 TNFRSF25Q93038 417 aa6.31□□□□□ -1.4
HMGB3P15-201ENST00000507326 ZNF594Q96JF6 807 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P15-201ENST00000507326 STARD13Q9Y3M8 1113 aa6.31□□□□□ -1.4
HMGB3P15-201ENST00000507326 PALM3A6NDB9 673 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P15-201ENST00000507326 PPP1R12BO60237 982 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P15-201ENST00000507326 ITGB7P26010 798 aa6.3□□□□□ -1.4
HMGB3P15-201ENST00000507326 TYRO3Q06418 890 aa6.3□□□□□ -1.4
HMGB3P15-201ENST00000507326 NEUROD1Q13562 356 aa6.3□□□□□ -1.4
HMGB3P15-201ENST00000507326 LARGE2Q8N3Y3 721 aa6.3□□□□□ -1.4
HMGB3P15-201ENST00000507326 SUSD3Q96L08 255 aa6.3□□□□□ -1.4
HMGB3P15-201ENST00000507326 ANKIB1Q9P2G1 1089 aa6.3□□□□□ -1.4
HMGB3P15-201ENST00000507326 KCNH4Q9UQ05 1017 aa6.3□□□□□ -1.4
HMGB3P15-201ENST00000507326 M0R2N6 131 aa6.29□□□□□ -1.4
HMGB3P15-201ENST00000507326 APBA3O96018 575 aa6.29□□□□□ -1.4
HMGB3P15-201ENST00000507326 HIRAP54198 1017 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P15-201ENST00000507326 TBC1D8BQ0IIM8 1120 aa6.29□□□□□ -1.4
HMGB3P15-201ENST00000507326 COL9A3Q14050 684 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P15-201ENST00000507326 MICALL1Q8N3F8 863 aa6.29□□□□□ -1.4
HMGB3P15-201ENST00000507326 RBM19Q9Y4C8 960 aaKnown RBP6.29□□□□□ -1.4
HMGB3P15-201ENST00000507326 C21orf2O43822 256 aa6.28□□□□□ -1.4
HMGB3P15-201ENST00000507326 TRIM28Q13263 835 aaKnown RBP6.28□□□□□ -1.4
HMGB3P15-201ENST00000507326 POTEAQ6S8J7 498 aa6.28□□□□□ -1.4
HMGB3P15-201ENST00000507326 SIX5Q8N196 739 aa6.28□□□□□ -1.4
HMGB3P15-201ENST00000507326 BHMTQ93088 406 aa6.28□□□□□ -1.4
HMGB3P15-201ENST00000507326 PRDM6Q9NQX0 595 aa6.28□□□□□ -1.4
HMGB3P15-201ENST00000507326 NID1P14543 1247 aa6.27□□□□□ -1.41
HMGB3P15-201ENST00000507326 KCNQ4P56696 695 aa6.27□□□□□ -1.41
HMGB3P15-201ENST00000507326 RSPO4Q2I0M5 234 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P15-201ENST00000507326 ALDH16A1Q8IZ83 802 aa6.27□□□□□ -1.41
HMGB3P15-201ENST00000507326 CHMP7Q8WUX9 453 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P15-201ENST00000507326 NGLY1Q96IV0 654 aa6.27□□□□□ -1.41
HMGB3P15-201ENST00000507326 ATAD2Q6PL18 1390 aa6.27□□□□□ -1.41
HMGB3P15-201ENST00000507326 DKK1O94907 266 aa6.26□□□□□ -1.41
HMGB3P15-201ENST00000507326 GRIK4Q16099 956 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms