RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 NPC1L1Q9UHC9 1359 aa22.25■■□□□ 1.15
SNF8-205ENST00000507302 KLRG2A4D1S0 409 aaPredicted RBP22.24■■□□□ 1.15
SNF8-205ENST00000507302 TEFQ10587 303 aa22.24■■□□□ 1.15
SNF8-205ENST00000507302 CCDC24Q8N4L8 307 aa22.24■■□□□ 1.15
SNF8-205ENST00000507302 GAS2L2Q8NHY3 880 aa22.24■■□□□ 1.15
SNF8-205ENST00000507302 MASTLQ96GX5 879 aa22.24■■□□□ 1.15
SNF8-205ENST00000507302 SETDB2Q96T68 719 aa22.24■■□□□ 1.15
SNF8-205ENST00000507302 A1BGP04217 495 aa22.23■■□□□ 1.15
SNF8-205ENST00000507302 FMNL2Q96PY5 1086 aa22.23■■□□□ 1.15
SNF8-205ENST00000507302 ZNF219Q9P2Y4 722 aaPredicted RBP22.23■■□□□ 1.15
SNF8-205ENST00000507302 CLEC4GQ6UXB4 293 aa22.22■■□□□ 1.15
SNF8-205ENST00000507302 LDHDQ86WU2 507 aa22.22■■□□□ 1.15
SNF8-205ENST00000507302 IQCA1LA6NCM1 817 aa22.21■■□□□ 1.15
SNF8-205ENST00000507302 RGL2O15211 777 aa22.21■■□□□ 1.15
SNF8-205ENST00000507302 PRDM10Q9NQV6 1147 aa22.21■■□□□ 1.15
SNF8-205ENST00000507302 MKRN1Q9UHC7 482 aaKnown RBP22.21■■□□□ 1.15
SNF8-205ENST00000507302 ITGBL1O95965 494 aaPredicted RBP22.2■■□□□ 1.14
SNF8-205ENST00000507302 ST5P78524 1137 aa22.2■■□□□ 1.14
SNF8-205ENST00000507302 TAF1DQ9H5J8 278 aaPredicted RBP22.2■■□□□ 1.14
SNF8-205ENST00000507302 FOXN1O15353 648 aa22.19■■□□□ 1.14
SNF8-205ENST00000507302 SNED1Q8TER0 1413 aa22.18■■□□□ 1.14
SNF8-205ENST00000507302 KCNQ3O43525 872 aa22.18■■□□□ 1.14
SNF8-205ENST00000507302 DZIP3Q86Y13 1208 aaKnown RBP22.18■■□□□ 1.14
SNF8-205ENST00000507302 ZNF330Q9Y3S2 320 aaPredicted RBP22.17■■□□□ 1.14
SNF8-205ENST00000507302 USP16Q9Y5T5 823 aa22.17■■□□□ 1.14
SNF8-205ENST00000507302 NPR1P16066 1061 aa22.16■■□□□ 1.14
SNF8-205ENST00000507302 FKBP4Q02790 459 aaKnown RBP eCLIP22.16■■□□□ 1.14
SNF8-205ENST00000507302 CCDC93Q567U6 631 aa22.16■■□□□ 1.14
SNF8-205ENST00000507302 PCGF6Q9BYE7 350 aa22.16■■□□□ 1.14
SNF8-205ENST00000507302 CC2D1BQ5T0F9 858 aaKnown RBP22.15■■□□□ 1.14
SNF8-205ENST00000507302 PHACTR3Q96KR7 559 aa22.15■■□□□ 1.14
SNF8-205ENST00000507302 TMEM88BA6NKF7 163 aa22.14■■□□□ 1.13
SNF8-205ENST00000507302 BTBD11A6QL63 1104 aa22.14■■□□□ 1.13
SNF8-205ENST00000507302 VEGFBP49765 207 aa22.14■■□□□ 1.13
SNF8-205ENST00000507302 ZNF541Q9H0D2 1346 aa22.13■■□□□ 1.13
SNF8-205ENST00000507302 NBPF5PQ86XG9 351 aaPredicted RBP22.13■■□□□ 1.13
SNF8-205ENST00000507302 WBP1LQ9NX94 342 aa22.13■■□□□ 1.13
SNF8-205ENST00000507302 FZD9O00144 591 aa22.12■■□□□ 1.13
SNF8-205ENST00000507302 U2SURPO15042 1029 aaKnown RBP22.12■■□□□ 1.13
SNF8-205ENST00000507302 CTCFP49711 727 aaPredicted RBP22.12■■□□□ 1.13
SNF8-205ENST00000507302 NPM2Q86SE8 214 aaKnown RBP22.12■■□□□ 1.13
SNF8-205ENST00000507302 RSPH6AQ9H0K4 717 aa22.12■■□□□ 1.13
SNF8-205ENST00000507302 THSD7BQ9C0I4 1608 aa22.11■■□□□ 1.13
SNF8-205ENST00000507302 PRAMEF22A3QJZ6 481 aa22.11■■□□□ 1.13
SNF8-205ENST00000507302 RASSF10A6NK89 507 aa22.11■■□□□ 1.13
SNF8-205ENST00000507302 RTKN2Q8IZC4 609 aa22.11■■□□□ 1.13
SNF8-205ENST00000507302 HACL1Q9UJ83 578 aa22.11■■□□□ 1.13
SNF8-205ENST00000507302 ZNF652Q9Y2D9 606 aa22.11■■□□□ 1.13
SNF8-205ENST00000507302 NBPF26B4DH59 902 aa22.1■■□□□ 1.13
SNF8-205ENST00000507302 NPHP1O15259 732 aa22.1■■□□□ 1.13
SNF8-205ENST00000507302 SNRPA1P09661 255 aaKnown RBP22.1■■□□□ 1.13
SNF8-205ENST00000507302 NBPF10Q6P3W6 841 aaKnown RBP22.1■■□□□ 1.13
SNF8-205ENST00000507302 TPTE2Q6XPS3 522 aa22.1■■□□□ 1.13
SNF8-205ENST00000507302 NBPF15Q8N660 670 aa22.1■■□□□ 1.13
SNF8-205ENST00000507302 ZNF277Q9NRM2 450 aaPredicted RBP22.1■■□□□ 1.13
SNF8-205ENST00000507302 LAMB4A4D0S4 1761 aa22.1■■□□□ 1.13
SNF8-205ENST00000507302 EPHX2P34913 555 aa22.09■■□□□ 1.13
SNF8-205ENST00000507302 PIP4K2AP48426 406 aaPredicted RBP22.09■■□□□ 1.13
SNF8-205ENST00000507302 PNMA8AQ86V59 439 aaPredicted RBP22.09■■□□□ 1.13
SNF8-205ENST00000507302 CRY2Q49AN0 593 aa22.08■■□□□ 1.13
SNF8-205ENST00000507302 OLFM4Q6UX06 510 aa22.08■■□□□ 1.13
SNF8-205ENST00000507302 LTBP1Q14766 1721 aa22.08■■□□□ 1.12
SNF8-205ENST00000507302 PRKAR2BP31323 418 aa22.07■■□□□ 1.12
SNF8-205ENST00000507302 IARSP41252 1262 aaKnown RBP22.07■■□□□ 1.12
SNF8-205ENST00000507302 GPC2Q8N158 579 aa22.07■■□□□ 1.12
SNF8-205ENST00000507302 PSMD1Q99460 953 aa22.07■■□□□ 1.12
SNF8-205ENST00000507302 COL4A5P29400 1685 aa22.07■■□□□ 1.12
SNF8-205ENST00000507302 ALDH1B1P30837 517 aa22.06■■□□□ 1.12
SNF8-205ENST00000507302 NIP7Q9Y221 180 aaKnown RBP eCLIP22.06■■□□□ 1.12
SNF8-205ENST00000507302 NUP98P52948 1817 aa22.06■■□□□ 1.12
SNF8-205ENST00000507302 RIC1Q4ADV7 1423 aa22.06■■□□□ 1.12
SNF8-205ENST00000507302 CNTROBQ8N137 903 aa22.05■■□□□ 1.12
SNF8-205ENST00000507302 SYNE4Q8N205 404 aa22.05■■□□□ 1.12
SNF8-205ENST00000507302 AIDAQ96BJ3 306 aa22.05■■□□□ 1.12
SNF8-205ENST00000507302 RNF123Q5XPI4 1314 aa22.05■■□□□ 1.12
SNF8-205ENST00000507302 EAPPQ56P03 285 aaPredicted RBP22.04■■□□□ 1.12
SNF8-205ENST00000507302 HTATSF1O43719 755 aaKnown RBP22.03■■□□□ 1.12
SNF8-205ENST00000507302 HLFQ16534 295 aa22.03■■□□□ 1.12
SNF8-205ENST00000507302 DEFB115Q30KQ5 88 aa22.03■■□□□ 1.12
SNF8-205ENST00000507302 KDM3BQ7LBC6 1761 aa22.02■■□□□ 1.12
SNF8-205ENST00000507302 HSPA8P11142 646 aaKnown RBP22.02■■□□□ 1.12
SNF8-205ENST00000507302 LBX1P52954 281 aa22.02■■□□□ 1.12
SNF8-205ENST00000507302 CC2D2BQ6DHV5 1058 aa22.02■■□□□ 1.12
SNF8-205ENST00000507302 MCM10Q7L590 875 aa22.02■■□□□ 1.12
SNF8-205ENST00000507302 TRPM7Q96QT4 1865 aa22.01■■□□□ 1.11
SNF8-205ENST00000507302 HOXA10P31260 410 aaPredicted RBP22.01■■□□□ 1.11
SNF8-205ENST00000507302 MAP1SQ66K74 1059 aaPredicted RBP22.01■■□□□ 1.11
SNF8-205ENST00000507302 WDR33Q9C0J8 1336 aaKnown RBP22.01■■□□□ 1.11
SNF8-205ENST00000507302 ABCC12Q96J65 1359 aa22■■□□□ 1.11
SNF8-205ENST00000507302 IBTKQ9P2D0 1353 aaPredicted RBP22■■□□□ 1.11
SNF8-205ENST00000507302 ERVV-1B6SEH8 477 aa22■■□□□ 1.11
SNF8-205ENST00000507302 CLEC11AQ9Y240 323 aa22■■□□□ 1.11
SNF8-205ENST00000507302 MAP2K1Q02750 393 aaPredicted RBP21.99■■□□□ 1.11
SNF8-205ENST00000507302 GRIPAP1Q4V328 841 aa21.99■■□□□ 1.11
SNF8-205ENST00000507302 DDX21Q9NR30 783 aaKnown RBP eCLIP21.99■■□□□ 1.11
SNF8-205ENST00000507302 JDP2Q8WYK2 163 aa21.98■■□□□ 1.11
SNF8-205ENST00000507302 RTF1Q92541 710 aaKnown RBP21.98■■□□□ 1.11
SNF8-205ENST00000507302 CFAP53Q96M91 514 aa21.98■■□□□ 1.11
SNF8-205ENST00000507302 DLG5Q8TDM6 1919 aa21.98■■□□□ 1.11
SNF8-205ENST00000507302 SCNN1DP51172 638 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms