RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 RTCBQ9Y3I0 505 aaKnown RBP18.07■□□□□ 0.48
RNF4-208ENST00000507247 ANKRD36CQ5JPF3 1778 aa18.07■□□□□ 0.48
RNF4-208ENST00000507247 PI4KAP2A4QPH2 592 aa18.06■□□□□ 0.48
RNF4-208ENST00000507247 RLBP1P12271 317 aa18.06■□□□□ 0.48
RNF4-208ENST00000507247 HMGB2P26583 209 aaKnown RBP18.06■□□□□ 0.48
RNF4-208ENST00000507247 R3HDM1Q15032 1099 aaKnown RBP18.06■□□□□ 0.48
RNF4-208ENST00000507247 DZIP3Q86Y13 1208 aaKnown RBP18.06■□□□□ 0.48
RNF4-208ENST00000507247 PI4KAP1Q8N8J0 262 aa18.06■□□□□ 0.48
RNF4-208ENST00000507247 API5Q9BZZ5 524 aaKnown RBP18.06■□□□□ 0.48
RNF4-208ENST00000507247 AFDNP55196 1824 aaKnown RBP18.05■□□□□ 0.48
RNF4-208ENST00000507247 ABCC4O15439 1325 aa18.05■□□□□ 0.48
RNF4-208ENST00000507247 PHF14O94880 888 aa18.05■□□□□ 0.48
RNF4-208ENST00000507247 DDX58O95786 925 aaKnown RBP18.05■□□□□ 0.48
RNF4-208ENST00000507247 KSR2Q6VAB6 950 aa18.05■□□□□ 0.48
RNF4-208ENST00000507247 ANKRD13DQ6ZTN6 518 aa18.05■□□□□ 0.48
RNF4-208ENST00000507247 PLBD2Q8NHP8 589 aa18.05■□□□□ 0.48
RNF4-208ENST00000507247 PANK1Q8TE04 598 aa18.05■□□□□ 0.48
RNF4-208ENST00000507247 ZBTB3Q9H5J0 574 aa18.05■□□□□ 0.48
RNF4-208ENST00000507247 TBC1D2BQ9UPU7 963 aa18.05■□□□□ 0.48
RNF4-208ENST00000507247 MAP3K2Q9Y2U5 619 aa18.05■□□□□ 0.48
RNF4-208ENST00000507247 PXDNLA1KZ92 1463 aa18.05■□□□□ 0.48
RNF4-208ENST00000507247 LRP5O75197 1615 aa18.05■□□□□ 0.48
RNF4-208ENST00000507247 MAP3K15Q6ZN16 1313 aa18.04■□□□□ 0.48
RNF4-208ENST00000507247 KIF6Q6ZMV9 814 aa18.04■□□□□ 0.48
RNF4-208ENST00000507247 DZIP1LQ8IYY4 767 aaKnown RBP18.04■□□□□ 0.48
RNF4-208ENST00000507247 DNAAF4Q8WXU2 420 aa18.04■□□□□ 0.48
RNF4-208ENST00000507247 ARHGEF1Q92888 912 aaKnown RBP18.04■□□□□ 0.48
RNF4-208ENST00000507247 ARXQ96QS3 562 aa18.04■□□□□ 0.48
RNF4-208ENST00000507247 A0A087WZG4 1122 aa18.03■□□□□ 0.48
RNF4-208ENST00000507247 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.03■□□□□ 0.48
RNF4-208ENST00000507247 CAMTA2O94983 1202 aa18.03■□□□□ 0.48
RNF4-208ENST00000507247 SSFA2P28290 1259 aa18.03■□□□□ 0.48
RNF4-208ENST00000507247 RIC3Q7Z5B4 369 aa18.03■□□□□ 0.48
RNF4-208ENST00000507247 NPM2Q86SE8 214 aaKnown RBP18.03■□□□□ 0.48
RNF4-208ENST00000507247 ADRA2BP18089 450 aa18.02■□□□□ 0.48
RNF4-208ENST00000507247 IRX6P78412 446 aaPredicted RBP18.02■□□□□ 0.48
RNF4-208ENST00000507247 PDE3AQ14432 1141 aa18.02■□□□□ 0.48
RNF4-208ENST00000507247 SLC15A2Q16348 729 aa18.02■□□□□ 0.48
RNF4-208ENST00000507247 HLFQ16534 295 aa18.02■□□□□ 0.48
RNF4-208ENST00000507247 TRAPPC3LQ5T215 181 aa18.02■□□□□ 0.48
RNF4-208ENST00000507247 TMEM57Q8N5G2 664 aa18.02■□□□□ 0.48
RNF4-208ENST00000507247 STK32BQ9NY57 414 aa18.02■□□□□ 0.48
RNF4-208ENST00000507247 TFCP2L1Q9NZI6 479 aa18.02■□□□□ 0.48
RNF4-208ENST00000507247 SRP68Q9UHB9 627 aaKnown RBP18.02■□□□□ 0.48
RNF4-208ENST00000507247 PNPLA7Q6ZV29 1317 aa18.01■□□□□ 0.47
RNF4-208ENST00000507247 ERVV-1B6SEH8 477 aa18.01■□□□□ 0.47
RNF4-208ENST00000507247 SLC4A10Q6U841 1118 aa18.01■□□□□ 0.47
RNF4-208ENST00000507247 FTSJ3Q8IY81 847 aaKnown RBP18.01■□□□□ 0.47
RNF4-208ENST00000507247 METTL22Q9BUU2 404 aaPredicted RBP18.01■□□□□ 0.47
RNF4-208ENST00000507247 NARFQ9UHQ1 456 aa18.01■□□□□ 0.47
RNF4-208ENST00000507247 USP42Q9H9J4 1324 aaKnown RBP18■□□□□ 0.47
RNF4-208ENST00000507247 ATP10DQ9P241 1426 aa18■□□□□ 0.47
RNF4-208ENST00000507247 GIGYF2Q6Y7W6 1299 aaKnown RBP18■□□□□ 0.47
RNF4-208ENST00000507247 MYD88Q99836 296 aa18■□□□□ 0.47
RNF4-208ENST00000507247 BCL2L12Q9HB09 334 aa18■□□□□ 0.47
RNF4-208ENST00000507247 MS4A1P11836 297 aa17.99■□□□□ 0.47
RNF4-208ENST00000507247 RFC4P35249 363 aa17.99■□□□□ 0.47
RNF4-208ENST00000507247 BEND3Q5T5X7 828 aa17.99■□□□□ 0.47
RNF4-208ENST00000507247 USPL1Q5W0Q7 1092 aa17.99■□□□□ 0.47
RNF4-208ENST00000507247 INTS3Q68E01 1043 aaKnown RBP17.99■□□□□ 0.47
RNF4-208ENST00000507247 COL23A1Q86Y22 540 aaPredicted RBP17.99■□□□□ 0.47
RNF4-208ENST00000507247 COG6Q9Y2V7 657 aa17.99■□□□□ 0.47
RNF4-208ENST00000507247 IGKV5-2P06315 115 aa17.98■□□□□ 0.47
RNF4-208ENST00000507247 CRBNQ96SW2 442 aa17.98■□□□□ 0.47
RNF4-208ENST00000507247 ZPR1O75312 459 aa17.97■□□□□ 0.47
RNF4-208ENST00000507247 CCT4P50991 539 aaKnown RBP17.97■□□□□ 0.47
RNF4-208ENST00000507247 TCIRG1Q13488 830 aa17.97■□□□□ 0.47
RNF4-208ENST00000507247 MVPQ14764 893 aaKnown RBP17.97■□□□□ 0.47
RNF4-208ENST00000507247 CWF19L2Q2TBE0 894 aaKnown RBP17.97■□□□□ 0.47
RNF4-208ENST00000507247 ITPRIPQ8IWB1 547 aa17.97■□□□□ 0.47
RNF4-208ENST00000507247 COL24A1Q17RW2 1714 aa17.97■□□□□ 0.47
RNF4-208ENST00000507247 ATP5J2-PTCD1G3V325 749 aa17.96■□□□□ 0.47
RNF4-208ENST00000507247 FLAD1Q8NFF5 587 aa17.96■□□□□ 0.47
RNF4-208ENST00000507247 LINS1Q8NG48 757 aa17.96■□□□□ 0.47
RNF4-208ENST00000507247 ISCA1Q9BUE6 129 aa17.96■□□□□ 0.47
RNF4-208ENST00000507247 SRCIN1Q9C0H9 1055 aa17.96■□□□□ 0.47
RNF4-208ENST00000507247 CASZ1Q86V15 1759 aa17.95■□□□□ 0.46
RNF4-208ENST00000507247 NEURL1BA8MQ27 555 aa17.95■□□□□ 0.46
RNF4-208ENST00000507247 RGL2O15211 777 aa17.95■□□□□ 0.46
RNF4-208ENST00000507247 NEXNQ0ZGT2 675 aa17.95■□□□□ 0.46
RNF4-208ENST00000507247 CLEC4GQ6UXB4 293 aa17.95■□□□□ 0.46
RNF4-208ENST00000507247 UBN2Q6ZU65 1347 aa17.95■□□□□ 0.46
RNF4-208ENST00000507247 ALDH1L1O75891 902 aa17.94■□□□□ 0.46
RNF4-208ENST00000507247 GYS1P13807 737 aa17.94■□□□□ 0.46
RNF4-208ENST00000507247 GPTP24298 496 aa17.94■□□□□ 0.46
RNF4-208ENST00000507247 HSP90AB3PQ58FF7 597 aa17.94■□□□□ 0.46
RNF4-208ENST00000507247 ZNF34Q8IZ26 560 aa17.94■□□□□ 0.46
RNF4-208ENST00000507247 ZNF652Q9Y2D9 606 aa17.94■□□□□ 0.46
RNF4-208ENST00000507247 MSH5O43196 834 aa17.93■□□□□ 0.46
RNF4-208ENST00000507247 FKBP8Q14318 412 aa17.93■□□□□ 0.46
RNF4-208ENST00000507247 TBC1D9BQ66K14 1250 aa17.93■□□□□ 0.46
RNF4-208ENST00000507247 EXOC6Q8TAG9 804 aa17.93■□□□□ 0.46
RNF4-208ENST00000507247 PDGFDQ9GZP0 370 aaPredicted RBP17.93■□□□□ 0.46
RNF4-208ENST00000507247 TRIM28Q13263 835 aaKnown RBP17.92■□□□□ 0.46
RNF4-208ENST00000507247 NLRP10Q86W26 655 aa17.92■□□□□ 0.46
RNF4-208ENST00000507247 NIP7Q9Y221 180 aaKnown RBP eCLIP17.92■□□□□ 0.46
RNF4-208ENST00000507247 IBTKQ9P2D0 1353 aaPredicted RBP17.91■□□□□ 0.46
RNF4-208ENST00000507247 NEFLP07196 543 aa17.91■□□□□ 0.46
RNF4-208ENST00000507247 GCKRQ14397 625 aa17.91■□□□□ 0.46
RNF4-208ENST00000507247 BICDL1Q6ZP65 573 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms