RNA–Protein interactions for RNA: ENST00000507063.1

NEDD4-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4, Length 457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-206ENST00000507063 MAP3K19Q56UN5 1328 aa9.15□□□□□ -0.94
NEDD4-206ENST00000507063 RRS1Q15050 365 aaKnown RBP9.15□□□□□ -0.94
NEDD4-206ENST00000507063 USHBP1Q8N6Y0 703 aa9.15□□□□□ -0.94
NEDD4-206ENST00000507063 TERF2IPQ9NYB0 399 aa9.15□□□□□ -0.94
NEDD4-206ENST00000507063 ABCC6O95255 1503 aa9.15□□□□□ -0.95
NEDD4-206ENST00000507063 HOXC9P31274 260 aa9.14□□□□□ -0.95
NEDD4-206ENST00000507063 TMUB1Q9BVT8 246 aa9.14□□□□□ -0.95
NEDD4-206ENST00000507063 MTFR1LQ9H019 292 aa9.14□□□□□ -0.95
NEDD4-206ENST00000507063 GGNBP2Q9H3C7 697 aa9.14□□□□□ -0.95
NEDD4-206ENST00000507063 PDZRN3Q9UPQ7 1066 aa9.14□□□□□ -0.95
NEDD4-206ENST00000507063 BTAF1O14981 1849 aa9.14□□□□□ -0.95
NEDD4-206ENST00000507063 RGPD2P0DJD1 1756 aa9.14□□□□□ -0.95
NEDD4-206ENST00000507063 PAPPAQ13219 1627 aa9.13□□□□□ -0.95
NEDD4-206ENST00000507063 AMPHP49418 695 aa9.13□□□□□ -0.95
NEDD4-206ENST00000507063 APLP1P51693 650 aa9.13□□□□□ -0.95
NEDD4-206ENST00000507063 NBPF6Q5VWK0 638 aa9.13□□□□□ -0.95
NEDD4-206ENST00000507063 ZNF516Q92618 1163 aa9.13□□□□□ -0.95
NEDD4-206ENST00000507063 SYTL4Q96C24 671 aaPredicted RBP9.13□□□□□ -0.95
NEDD4-206ENST00000507063 COG3Q96JB2 828 aa9.13□□□□□ -0.95
NEDD4-206ENST00000507063 NBPF4Q96M43 638 aa9.13□□□□□ -0.95
NEDD4-206ENST00000507063 NPDC1Q9NQX5 325 aaPredicted RBP9.13□□□□□ -0.95
NEDD4-206ENST00000507063 TESPA1A2RU30 521 aaPredicted RBP9.12□□□□□ -0.95
NEDD4-206ENST00000507063 C3orf80F5H4A9 247 aa9.12□□□□□ -0.95
NEDD4-206ENST00000507063 FYB1O15117 783 aa9.12□□□□□ -0.95
NEDD4-206ENST00000507063 PUS7Q96PZ0 661 aaKnown RBP9.12□□□□□ -0.95
NEDD4-206ENST00000507063 ARXQ96QS3 562 aa9.12□□□□□ -0.95
NEDD4-206ENST00000507063 NSD2O96028 1365 aa9.12□□□□□ -0.95
NEDD4-206ENST00000507063 MEGF6O75095 1541 aa9.11□□□□□ -0.95
NEDD4-206ENST00000507063 FAM208AQ9UK61 1670 aaKnown RBP9.11□□□□□ -0.95
NEDD4-206ENST00000507063 ZCRB1Q8TBF4 217 aaKnown RBP9.11□□□□□ -0.95
NEDD4-206ENST00000507063 PNPLA7Q6ZV29 1317 aa9.1□□□□□ -0.95
NEDD4-206ENST00000507063 HSP90AB2PQ58FF8 381 aa9.1□□□□□ -0.95
NEDD4-206ENST00000507063 SWT1Q5T5J6 900 aaKnown RBP9.1□□□□□ -0.95
NEDD4-206ENST00000507063 SMIM5Q71RC9 77 aa9.1□□□□□ -0.95
NEDD4-206ENST00000507063 ZNF784Q8NCA9 323 aaPredicted RBP9.1□□□□□ -0.95
NEDD4-206ENST00000507063 SHANK3Q9BYB0 1731 aa9.1□□□□□ -0.95
NEDD4-206ENST00000507063 COPS2P61201 443 aa9.09□□□□□ -0.95
NEDD4-206ENST00000507063 ZNF787Q6DD87 383 aa9.09□□□□□ -0.95
NEDD4-206ENST00000507063 NLGN2Q8NFZ4 835 aa9.09□□□□□ -0.95
NEDD4-206ENST00000507063 CARD14Q9BXL6 1004 aa9.09□□□□□ -0.95
NEDD4-206ENST00000507063 TFCP2L1Q9NZI6 479 aa9.09□□□□□ -0.95
NEDD4-206ENST00000507063 ANKRD36BQ8N2N9 1353 aa9.09□□□□□ -0.95
NEDD4-206ENST00000507063 DOT1LQ8TEK3 1739 aa9.08□□□□□ -0.96
NEDD4-206ENST00000507063 KAT6BQ8WYB5 2073 aa9.08□□□□□ -0.96
NEDD4-206ENST00000507063 LCE2BO14633 110 aa9.08□□□□□ -0.96
NEDD4-206ENST00000507063 PADI6Q6TGC4 694 aa9.08□□□□□ -0.96
NEDD4-206ENST00000507063 USP47Q96K76 1375 aa9.08□□□□□ -0.96
NEDD4-206ENST00000507063 TUBGCP6Q96RT7 1819 aa9.08□□□□□ -0.96
NEDD4-206ENST00000507063 ZPR1O75312 459 aa9.07□□□□□ -0.96
NEDD4-206ENST00000507063 SLC27A3Q5K4L6 730 aa9.07□□□□□ -0.96
NEDD4-206ENST00000507063 RBM26Q5T8P6 1007 aaKnown RBP9.07□□□□□ -0.96
NEDD4-206ENST00000507063 MSL1Q68DK7 614 aa9.07□□□□□ -0.96
NEDD4-206ENST00000507063 AMIGO3Q86WK7 504 aa9.07□□□□□ -0.96
NEDD4-206ENST00000507063 COL23A1Q86Y22 540 aaPredicted RBP9.07□□□□□ -0.96
NEDD4-206ENST00000507063 TTC13Q8NBP0 860 aa9.07□□□□□ -0.96
NEDD4-206ENST00000507063 CCNL1Q9UK58 526 aaPredicted RBP9.07□□□□□ -0.96
NEDD4-206ENST00000507063 PCDHB3Q9Y5E6 796 aa9.07□□□□□ -0.96
NEDD4-206ENST00000507063 EMILIN1Q9Y6C2 1016 aa9.07□□□□□ -0.96
NEDD4-206ENST00000507063 CYP27B1O15528 508 aa9.06□□□□□ -0.96
NEDD4-206ENST00000507063 TMF1P82094 1093 aa9.06□□□□□ -0.96
NEDD4-206ENST00000507063 GPR162Q16538 588 aa9.06□□□□□ -0.96
NEDD4-206ENST00000507063 MPRIPQ6WCQ1 1025 aa9.06□□□□□ -0.96
NEDD4-206ENST00000507063 NKX2-3Q8TAU0 364 aa9.06□□□□□ -0.96
NEDD4-206ENST00000507063 LY75O60449 1722 aa9.05□□□□□ -0.96
NEDD4-206ENST00000507063 CEP350Q5VT06 3117 aa9.05□□□□□ -0.96
NEDD4-206ENST00000507063 PPM1GO15355 546 aaPredicted RBP9.04□□□□□ -0.96
NEDD4-206ENST00000507063 YBX3P16989 372 aaKnown RBP eCLIP9.04□□□□□ -0.96
NEDD4-206ENST00000507063 TATP17735 454 aaPredicted RBP9.04□□□□□ -0.96
NEDD4-206ENST00000507063 SLC16A10Q8TF71 515 aa9.04□□□□□ -0.96
NEDD4-206ENST00000507063 RAPGEF4Q8WZA2 1011 aa9.04□□□□□ -0.96
NEDD4-206ENST00000507063 RTL1A6NKG5 1358 aa9.03□□□□□ -0.96
NEDD4-206ENST00000507063 INSRP06213 1382 aa9.03□□□□□ -0.96
NEDD4-206ENST00000507063 MAP3K5Q99683 1374 aa9.03□□□□□ -0.96
NEDD4-206ENST00000507063 POLD1P28340 1107 aa9.03□□□□□ -0.96
NEDD4-206ENST00000507063 TRIM26Q12899 539 aaPredicted RBP9.03□□□□□ -0.96
NEDD4-206ENST00000507063 PTGDRQ13258 359 aa9.03□□□□□ -0.96
NEDD4-206ENST00000507063 NSD3Q9BZ95 1437 aa9.03□□□□□ -0.96
NEDD4-206ENST00000507063 COL24A1Q17RW2 1714 aa9.02□□□□□ -0.96
NEDD4-206ENST00000507063 QSER1Q2KHR3 1735 aa9.02□□□□□ -0.96
NEDD4-206ENST00000507063 TOGARAM1Q9Y4F4 1720 aa9.02□□□□□ -0.96
NEDD4-206ENST00000507063 FLT4P35916 1363 aa9.02□□□□□ -0.97
NEDD4-206ENST00000507063 GPR37O15354 613 aa9.02□□□□□ -0.97
NEDD4-206ENST00000507063 SLC19A1P41440 591 aa9.02□□□□□ -0.97
NEDD4-206ENST00000507063 TNNT2P45379 298 aaPredicted RBP9.02□□□□□ -0.97
NEDD4-206ENST00000507063 KMT5BQ4FZB7 885 aa9.02□□□□□ -0.97
NEDD4-206ENST00000507063 PIGBQ92521 554 aa9.02□□□□□ -0.97
NEDD4-206ENST00000507063 POLR3GLQ9BT43 218 aa9.02□□□□□ -0.97
NEDD4-206ENST00000507063 WWC3Q9ULE0 1092 aa9.02□□□□□ -0.97
NEDD4-206ENST00000507063 PALLDQ8WX93 1383 aa9.01□□□□□ -0.97
NEDD4-206ENST00000507063 KIF20BQ96Q89 1820 aa9.01□□□□□ -0.97
NEDD4-206ENST00000507063 PKDCCQ504Y2 493 aa9.01□□□□□ -0.97
NEDD4-206ENST00000507063 RBM46Q8TBY0 533 aaKnown RBP9.01□□□□□ -0.97
NEDD4-206ENST00000507063 EYA1Q99502 592 aa9.01□□□□□ -0.97
NEDD4-206ENST00000507063 CGNL1Q0VF96 1302 aa9.01□□□□□ -0.97
NEDD4-206ENST00000507063 PCDH11XQ9BZA7 1347 aa9.01□□□□□ -0.97
NEDD4-206ENST00000507063 PCDH11YQ9BZA8 1340 aa9.01□□□□□ -0.97
NEDD4-206ENST00000507063 SMG6Q86US8 1419 aaKnown RBP9□□□□□ -0.97
NEDD4-206ENST00000507063 DNAJB2P25686 324 aa9□□□□□ -0.97
NEDD4-206ENST00000507063 C1QTNF8P60827 252 aa9□□□□□ -0.97
NEDD4-206ENST00000507063 PCGF6Q9BYE7 350 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms