RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 MAP3K15Q6ZN16 1313 aa16.48■□□□□ 0.23
TCOF1-210ENST00000506767 ERVV-1B6SEH8 477 aa16.48■□□□□ 0.23
TCOF1-210ENST00000506767 G2E3Q7L622 706 aa16.48■□□□□ 0.23
TCOF1-210ENST00000506767 SSH1Q8WYL5 1049 aa16.48■□□□□ 0.23
TCOF1-210ENST00000506767 MTFR1LQ9H019 292 aa16.48■□□□□ 0.23
TCOF1-210ENST00000506767 AIMP1Q12904 312 aaKnown RBP16.47■□□□□ 0.23
TCOF1-210ENST00000506767 CLEC4GQ6UXB4 293 aa16.47■□□□□ 0.23
TCOF1-210ENST00000506767 NLGN1Q8N2Q7 840 aa16.47■□□□□ 0.23
TCOF1-210ENST00000506767 MRPL50Q8N5N7 158 aaKnown RBP16.47■□□□□ 0.23
TCOF1-210ENST00000506767 ZBTB7AO95365 584 aa16.46■□□□□ 0.23
TCOF1-210ENST00000506767 RARSP54136 660 aaKnown RBP16.46■□□□□ 0.23
TCOF1-210ENST00000506767 BRPF1P55201 1214 aaPredicted RBP16.46■□□□□ 0.23
TCOF1-210ENST00000506767 FKBP8Q14318 412 aa16.46■□□□□ 0.23
TCOF1-210ENST00000506767 HLFQ16534 295 aa16.46■□□□□ 0.23
TCOF1-210ENST00000506767 KIF6Q6ZMV9 814 aa16.46■□□□□ 0.23
TCOF1-210ENST00000506767 ARXQ96QS3 562 aa16.46■□□□□ 0.23
TCOF1-210ENST00000506767 NUP98P52948 1817 aa16.46■□□□□ 0.23
TCOF1-210ENST00000506767 TM4SF1P30408 202 aa16.45■□□□□ 0.22
TCOF1-210ENST00000506767 FLIIQ13045 1269 aa16.45■□□□□ 0.22
TCOF1-210ENST00000506767 GIGYF2Q6Y7W6 1299 aaKnown RBP16.45■□□□□ 0.22
TCOF1-210ENST00000506767 ANKRD13DQ6ZTN6 518 aa16.45■□□□□ 0.22
TCOF1-210ENST00000506767 PLBD2Q8NHP8 589 aa16.45■□□□□ 0.22
TCOF1-210ENST00000506767 SGIP1Q9BQI5 828 aa16.45■□□□□ 0.22
TCOF1-210ENST00000506767 ZBTB3Q9H5J0 574 aa16.45■□□□□ 0.22
TCOF1-210ENST00000506767 PPP1R1BQ9UD71 204 aaPredicted RBP16.45■□□□□ 0.22
TCOF1-210ENST00000506767 MSL1Q68DK7 614 aa16.44■□□□□ 0.22
TCOF1-210ENST00000506767 SPON1Q9HCB6 807 aa16.44■□□□□ 0.22
TCOF1-210ENST00000506767 ARFGEF2Q9Y6D5 1785 aa16.43■□□□□ 0.22
TCOF1-210ENST00000506767 PTGER2P43116 358 aa16.43■□□□□ 0.22
TCOF1-210ENST00000506767 BCL2L13Q9BXK5 485 aa16.43■□□□□ 0.22
TCOF1-210ENST00000506767 ATF5Q9Y2D1 282 aaPredicted RBP16.43■□□□□ 0.22
TCOF1-210ENST00000506767 ZNF652Q9Y2D9 606 aa16.43■□□□□ 0.22
TCOF1-210ENST00000506767 ADCY9O60503 1353 aa16.42■□□□□ 0.22
TCOF1-210ENST00000506767 DDX58O95786 925 aaKnown RBP16.42■□□□□ 0.22
TCOF1-210ENST00000506767 NFIXQ14938 502 aa16.42■□□□□ 0.22
TCOF1-210ENST00000506767 TBC1D9BQ66K14 1250 aa16.42■□□□□ 0.22
TCOF1-210ENST00000506767 KSR2Q6VAB6 950 aa16.42■□□□□ 0.22
TCOF1-210ENST00000506767 SMC4Q9NTJ3 1288 aa16.42■□□□□ 0.22
TCOF1-210ENST00000506767 ATP10DQ9P241 1426 aa16.42■□□□□ 0.22
TCOF1-210ENST00000506767 ANKRD36CQ5JPF3 1778 aa16.41■□□□□ 0.22
TCOF1-210ENST00000506767 PI4KAP2A4QPH2 592 aa16.41■□□□□ 0.22
TCOF1-210ENST00000506767 TCIRG1Q13488 830 aa16.41■□□□□ 0.22
TCOF1-210ENST00000506767 RIC3Q7Z5B4 369 aa16.41■□□□□ 0.22
TCOF1-210ENST00000506767 ZNF34Q8IZ26 560 aa16.41■□□□□ 0.22
TCOF1-210ENST00000506767 PI4KAP1Q8N8J0 262 aa16.41■□□□□ 0.22
TCOF1-210ENST00000506767 BCAR3O75815 825 aa16.4■□□□□ 0.22
TCOF1-210ENST00000506767 MMP10P09238 476 aa16.4■□□□□ 0.22
TCOF1-210ENST00000506767 DDR1Q08345 913 aa16.4■□□□□ 0.22
TCOF1-210ENST00000506767 FKBP5Q13451 457 aaPredicted RBP16.4■□□□□ 0.22
TCOF1-210ENST00000506767 HSP90AB3PQ58FF7 597 aa16.4■□□□□ 0.22
TCOF1-210ENST00000506767 PTPRCP08575 1304 aa16.4■□□□□ 0.22
TCOF1-210ENST00000506767 NRXN2Q9P2S2 1712 aa16.39■□□□□ 0.21
TCOF1-210ENST00000506767 POLRMTO00411 1230 aaKnown RBP16.39■□□□□ 0.21
TCOF1-210ENST00000506767 SETDB2Q96T68 719 aa16.39■□□□□ 0.21
TCOF1-210ENST00000506767 METTL22Q9BUU2 404 aaPredicted RBP16.39■□□□□ 0.21
TCOF1-210ENST00000506767 NIP7Q9Y221 180 aaKnown RBP eCLIP16.39■□□□□ 0.21
TCOF1-210ENST00000506767 MAP3K2Q9Y2U5 619 aa16.39■□□□□ 0.21
TCOF1-210ENST00000506767 POLD1P28340 1107 aa16.38■□□□□ 0.21
TCOF1-210ENST00000506767 TRIM28Q13263 835 aaKnown RBP16.38■□□□□ 0.21
TCOF1-210ENST00000506767 BICDL1Q6ZP65 573 aa16.38■□□□□ 0.21
TCOF1-210ENST00000506767 ISCA1Q9BUE6 129 aa16.38■□□□□ 0.21
TCOF1-210ENST00000506767 NOB1Q9ULX3 412 aaKnown RBP16.38■□□□□ 0.21
TCOF1-210ENST00000506767 UBN2Q6ZU65 1347 aa16.38■□□□□ 0.21
TCOF1-210ENST00000506767 AFDNP55196 1824 aaKnown RBP16.38■□□□□ 0.21
TCOF1-210ENST00000506767 CARMIL3Q8ND23 1372 aa16.38■□□□□ 0.21
TCOF1-210ENST00000506767 DNAAF4Q8WXU2 420 aa16.37■□□□□ 0.21
TCOF1-210ENST00000506767 ARHGAP45Q92619 1136 aa16.37■□□□□ 0.21
TCOF1-210ENST00000506767 RCAN3Q9UKA8 241 aa16.37■□□□□ 0.21
TCOF1-210ENST00000506767 PARP3Q9Y6F1 533 aa16.37■□□□□ 0.21
TCOF1-210ENST00000506767 KIF16BQ96L93 1317 aa16.37■□□□□ 0.21
TCOF1-210ENST00000506767 F6X3S4 739 aa16.36■□□□□ 0.21
TCOF1-210ENST00000506767 SERPINB2P05120 415 aa16.36■□□□□ 0.21
TCOF1-210ENST00000506767 GPTP24298 496 aa16.36■□□□□ 0.21
TCOF1-210ENST00000506767 PARP10Q53GL7 1025 aa16.36■□□□□ 0.21
TCOF1-210ENST00000506767 MYD88Q99836 296 aa16.36■□□□□ 0.21
TCOF1-210ENST00000506767 IGKV5-2P06315 115 aa16.35■□□□□ 0.21
TCOF1-210ENST00000506767 NLRP10Q86W26 655 aa16.35■□□□□ 0.21
TCOF1-210ENST00000506767 IBTKQ9P2D0 1353 aaPredicted RBP16.35■□□□□ 0.21
TCOF1-210ENST00000506767 ATP5J2-PTCD1G3V325 749 aa16.34■□□□□ 0.21
TCOF1-210ENST00000506767 BEND3Q5T5X7 828 aa16.34■□□□□ 0.21
TCOF1-210ENST00000506767 SUSD4Q5VX71 490 aa16.34■□□□□ 0.21
TCOF1-210ENST00000506767 IPO8O15397 1037 aaKnown RBP16.33■□□□□ 0.2
TCOF1-210ENST00000506767 NTSR2O95665 410 aa16.33■□□□□ 0.2
TCOF1-210ENST00000506767 NEXNQ0ZGT2 675 aa16.33■□□□□ 0.2
TCOF1-210ENST00000506767 PRR5LQ6MZQ0 368 aa16.33■□□□□ 0.2
TCOF1-210ENST00000506767 PPP1R42Q7Z4L9 355 aa16.33■□□□□ 0.2
TCOF1-210ENST00000506767 CCDC191Q8NCU4 936 aa16.33■□□□□ 0.2
TCOF1-210ENST00000506767 LINS1Q8NG48 757 aa16.33■□□□□ 0.2
TCOF1-210ENST00000506767 API5Q9BZZ5 524 aaKnown RBP16.33■□□□□ 0.2
TCOF1-210ENST00000506767 PXDNLA1KZ92 1463 aa16.33■□□□□ 0.2
TCOF1-210ENST00000506767 KIF13BQ9NQT8 1826 aa16.33■□□□□ 0.2
TCOF1-210ENST00000506767 DCAF8L1A6NGE4 600 aa16.32■□□□□ 0.2
TCOF1-210ENST00000506767 NEURL1BA8MQ27 555 aa16.32■□□□□ 0.2
TCOF1-210ENST00000506767 ZKSCAN2Q63HK3 967 aa16.32■□□□□ 0.2
TCOF1-210ENST00000506767 ATF7IPQ6VMQ6 1270 aa16.32■□□□□ 0.2
TCOF1-210ENST00000506767 TPTE2Q6XPS3 522 aa16.32■□□□□ 0.2
TCOF1-210ENST00000506767 NBPF5PQ86XG9 351 aaPredicted RBP16.32■□□□□ 0.2
TCOF1-210ENST00000506767 NYXQ9GZU5 481 aa16.32■□□□□ 0.2
TCOF1-210ENST00000506767 N4BP2Q86UW6 1770 aaPredicted RBP16.31■□□□□ 0.2
TCOF1-210ENST00000506767 C10orf71Q711Q0 1435 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms