RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 ALS2Q96Q42 1657 aa6.69□□□□□ -1.34
CPNE4-207ENST00000506687 G3V3G9 751 aa6.69□□□□□ -1.34
CPNE4-207ENST00000506687 PHF14O94880 888 aa6.69□□□□□ -1.34
CPNE4-207ENST00000506687 TCF3P15923 654 aa6.69□□□□□ -1.34
CPNE4-207ENST00000506687 NDUFV2P19404 249 aa6.69□□□□□ -1.34
CPNE4-207ENST00000506687 ERCC3P19447 782 aa6.69□□□□□ -1.34
CPNE4-207ENST00000506687 CHRDL2Q6WN34 429 aa6.69□□□□□ -1.34
CPNE4-207ENST00000506687 PTF1AQ7RTS3 328 aa6.69□□□□□ -1.34
CPNE4-207ENST00000506687 CARD14Q9BXL6 1004 aa6.69□□□□□ -1.34
CPNE4-207ENST00000506687 TMEM121BQ9BXQ6 578 aaPredicted RBP6.69□□□□□ -1.34
CPNE4-207ENST00000506687 PRDM10Q9NQV6 1147 aa6.69□□□□□ -1.34
CPNE4-207ENST00000506687 KIF7Q2M1P5 1343 aa6.69□□□□□ -1.34
CPNE4-207ENST00000506687 WDR90Q96KV7 1748 aa6.68□□□□□ -1.34
CPNE4-207ENST00000506687 SMARCA5O60264 1052 aaPredicted RBP6.68□□□□□ -1.34
CPNE4-207ENST00000506687 C16orf71Q8IYS4 520 aaPredicted RBP6.68□□□□□ -1.34
CPNE4-207ENST00000506687 PRR7Q8TB68 274 aa6.68□□□□□ -1.34
CPNE4-207ENST00000506687 TMC1Q8TDI8 760 aa6.68□□□□□ -1.34
CPNE4-207ENST00000506687 GIPC2Q8TF65 315 aa6.68□□□□□ -1.34
CPNE4-207ENST00000506687 MAFBQ9Y5Q3 323 aaPredicted RBP6.68□□□□□ -1.34
CPNE4-207ENST00000506687 WASHC2AQ641Q2 1341 aa6.68□□□□□ -1.34
CPNE4-207ENST00000506687 TTC21BQ7Z4L5 1316 aa6.68□□□□□ -1.34
CPNE4-207ENST00000506687 A0A1W2PP64 1363 aa6.68□□□□□ -1.34
CPNE4-207ENST00000506687 ANKRD36BQ8N2N9 1353 aa6.68□□□□□ -1.34
CPNE4-207ENST00000506687 CCDC7Q96M83 1385 aa6.68□□□□□ -1.34
CPNE4-207ENST00000506687 MON2Q7Z3U7 1717 aa6.67□□□□□ -1.34
CPNE4-207ENST00000506687 PER1O15534 1290 aaPredicted RBP6.67□□□□□ -1.34
CPNE4-207ENST00000506687 TIE1P35590 1138 aa6.67□□□□□ -1.34
CPNE4-207ENST00000506687 CHRNA2Q15822 529 aa6.67□□□□□ -1.34
CPNE4-207ENST00000506687 SLAIN1Q8ND83 568 aa6.67□□□□□ -1.34
CPNE4-207ENST00000506687 ABHD8Q96I13 439 aa6.67□□□□□ -1.34
CPNE4-207ENST00000506687 L3MBTL3Q96JM7 780 aaPredicted RBP6.67□□□□□ -1.34
CPNE4-207ENST00000506687 HMX1Q9NP08 348 aaPredicted RBP6.67□□□□□ -1.34
CPNE4-207ENST00000506687 TERF2IPQ9NYB0 399 aa6.67□□□□□ -1.34
CPNE4-207ENST00000506687 TRIM35Q9UPQ4 493 aa6.67□□□□□ -1.34
CPNE4-207ENST00000506687 USP31Q70CQ4 1352 aa6.67□□□□□ -1.34
CPNE4-207ENST00000506687 KTN1Q86UP2 1357 aaKnown RBP6.67□□□□□ -1.34
CPNE4-207ENST00000506687 KIAA0232Q92628 1395 aa6.67□□□□□ -1.34
CPNE4-207ENST00000506687 ABCA3Q99758 1704 aa6.67□□□□□ -1.34
CPNE4-207ENST00000506687 BCL9O00512 1426 aa6.67□□□□□ -1.34
CPNE4-207ENST00000506687 GPR37L1O60883 481 aa6.66□□□□□ -1.34
CPNE4-207ENST00000506687 CD46P15529 392 aa6.66□□□□□ -1.34
CPNE4-207ENST00000506687 CD44P16070 742 aaKnown RBP6.66□□□□□ -1.34
CPNE4-207ENST00000506687 CANXP27824 592 aaKnown RBP6.66□□□□□ -1.34
CPNE4-207ENST00000506687 NOM1Q5C9Z4 860 aaKnown RBP6.66□□□□□ -1.34
CPNE4-207ENST00000506687 LARP1Q6PKG0 1096 aaKnown RBP6.66□□□□□ -1.34
CPNE4-207ENST00000506687 TBC1D9Q6ZT07 1266 aa6.66□□□□□ -1.34
CPNE4-207ENST00000506687 HDGFL2Q7Z4V5 671 aaPredicted RBP6.66□□□□□ -1.34
CPNE4-207ENST00000506687 PDCD7Q8N8D1 485 aaKnown RBP6.66□□□□□ -1.34
CPNE4-207ENST00000506687 SREK1Q8WXA9 508 aaKnown RBP6.66□□□□□ -1.34
CPNE4-207ENST00000506687 POLR3GLQ9BT43 218 aa6.66□□□□□ -1.34
CPNE4-207ENST00000506687 PANK3Q9H999 370 aa6.66□□□□□ -1.34
CPNE4-207ENST00000506687 PCDHGA10Q9Y5H3 936 aa6.66□□□□□ -1.34
CPNE4-207ENST00000506687 CD2APQ9Y5K6 639 aa6.66□□□□□ -1.34
CPNE4-207ENST00000506687 TTC21AQ8NDW8 1320 aa6.66□□□□□ -1.34
CPNE4-207ENST00000506687 EDC4Q6P2E9 1401 aaKnown RBP6.66□□□□□ -1.34
CPNE4-207ENST00000506687 CRYBG1Q9Y4K1 1723 aa6.65□□□□□ -1.34
CPNE4-207ENST00000506687 FYB1O15117 783 aa6.65□□□□□ -1.34
CPNE4-207ENST00000506687 SEMA3FQ13275 785 aa6.65□□□□□ -1.34
CPNE4-207ENST00000506687 DDB1Q16531 1140 aa6.65□□□□□ -1.34
CPNE4-207ENST00000506687 ZNF827Q17R98 1081 aa6.65□□□□□ -1.34
CPNE4-207ENST00000506687 TMEM164Q5U3C3 297 aa6.65□□□□□ -1.34
CPNE4-207ENST00000506687 NME9Q86XW9 330 aa6.65□□□□□ -1.34
CPNE4-207ENST00000506687 ABTB2Q8N961 1025 aa6.65□□□□□ -1.34
CPNE4-207ENST00000506687 TRIM34Q9BYJ4 488 aa6.65□□□□□ -1.34
CPNE4-207ENST00000506687 NMRK2Q9NPI5 230 aa6.65□□□□□ -1.34
CPNE4-207ENST00000506687 PIK3C2AO00443 1686 aa6.65□□□□□ -1.35
CPNE4-207ENST00000506687 USP54Q70EL1 1684 aa6.65□□□□□ -1.35
CPNE4-207ENST00000506687 ARID4AP29374 1257 aaPredicted RBP6.64□□□□□ -1.35
CPNE4-207ENST00000506687 GJA5P36382 358 aa6.64□□□□□ -1.35
CPNE4-207ENST00000506687 CTDSPL2Q05D32 466 aa6.64□□□□□ -1.35
CPNE4-207ENST00000506687 NUTM2GQ5VZR2 741 aa6.64□□□□□ -1.35
CPNE4-207ENST00000506687 PHLDB3Q6NSJ2 640 aa6.64□□□□□ -1.35
CPNE4-207ENST00000506687 TYW1BQ6NUM6 668 aa6.64□□□□□ -1.35
CPNE4-207ENST00000506687 TMEM92Q6UXU6 159 aa6.64□□□□□ -1.35
CPNE4-207ENST00000506687 NLRP13Q86W25 1043 aa6.64□□□□□ -1.35
CPNE4-207ENST00000506687 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.64□□□□□ -1.35
CPNE4-207ENST00000506687 STK32AQ8WU08 396 aa6.64□□□□□ -1.35
CPNE4-207ENST00000506687 SPATA32Q96LK8 384 aa6.64□□□□□ -1.35
CPNE4-207ENST00000506687 PCNTO95613 3336 aa6.63□□□□□ -1.35
CPNE4-207ENST00000506687 SLIT3O75094 1523 aa6.63□□□□□ -1.35
CPNE4-207ENST00000506687 GCP02774 474 aa6.63□□□□□ -1.35
CPNE4-207ENST00000506687 SOX11P35716 441 aa6.63□□□□□ -1.35
CPNE4-207ENST00000506687 CTCFP49711 727 aaPredicted RBP6.63□□□□□ -1.35
CPNE4-207ENST00000506687 FXR2P51116 673 aaKnown RBP eCLIP6.63□□□□□ -1.35
CPNE4-207ENST00000506687 MARSP56192 900 aaKnown RBP6.63□□□□□ -1.35
CPNE4-207ENST00000506687 SMC1BQ8NDV3 1235 aa6.63□□□□□ -1.35
CPNE4-207ENST00000506687 BMP2KQ9NSY1 1161 aaPredicted RBP6.63□□□□□ -1.35
CPNE4-207ENST00000506687 PEAK1Q9H792 1746 aa6.62□□□□□ -1.35
CPNE4-207ENST00000506687 NSD3Q9BZ95 1437 aa6.62□□□□□ -1.35
CPNE4-207ENST00000506687 CPDO75976 1380 aa6.62□□□□□ -1.35
CPNE4-207ENST00000506687 PNPLA7Q6ZV29 1317 aa6.62□□□□□ -1.35
CPNE4-207ENST00000506687 SOWAHDA6NJG2 315 aa6.62□□□□□ -1.35
CPNE4-207ENST00000506687 DDX11L8A8MPP1 907 aa6.62□□□□□ -1.35
CPNE4-207ENST00000506687 FOXN1O15353 648 aa6.62□□□□□ -1.35
CPNE4-207ENST00000506687 ATP9BO43861 1147 aa6.62□□□□□ -1.35
CPNE4-207ENST00000506687 ZC3H6P61129 1189 aaKnown RBP6.62□□□□□ -1.35
CPNE4-207ENST00000506687 PRPF38BQ5VTL8 546 aaKnown RBP6.62□□□□□ -1.35
CPNE4-207ENST00000506687 ARHGEF25Q86VW2 580 aa6.62□□□□□ -1.35
CPNE4-207ENST00000506687 MARCH10Q8NA82 808 aaPredicted RBP6.62□□□□□ -1.35
CPNE4-207ENST00000506687 PTCD2Q8WV60 388 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms