RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 RTL5Q5HYW3 569 aaPredicted RBP15.05■□□□□ -0
LIN54-206ENST00000506560 OSBPL3Q9H4L5 887 aa15.05■□□□□ -0
LIN54-206ENST00000506560 AHDC1Q5TGY3 1603 aaPredicted RBP15.05■□□□□ -0
LIN54-206ENST00000506560 GCKRQ14397 625 aa15.04■□□□□ -0
LIN54-206ENST00000506560 UBR2Q8IWV8 1755 aa15.04■□□□□ -0
LIN54-206ENST00000506560 TMOD3Q9NYL9 352 aa15.03■□□□□ -0
LIN54-206ENST00000506560 ZNF330Q9Y3S2 320 aaPredicted RBP15.03■□□□□ -0
LIN54-206ENST00000506560 TUBGCP6Q96RT7 1819 aa15.03■□□□□ -0
LIN54-206ENST00000506560 DISP2A7MBM2 1401 aa15.03■□□□□ -0
LIN54-206ENST00000506560 MTX1Q13505 466 aa15.02■□□□□ -0
LIN54-206ENST00000506560 SIL1Q9H173 461 aa15.02■□□□□ -0
LIN54-206ENST00000506560 UTYO14607 1347 aa15.02■□□□□ -0
LIN54-206ENST00000506560 LAMB4A4D0S4 1761 aa15.02□□□□□ -0.01
LIN54-206ENST00000506560 COL14A1Q05707 1796 aaKnown RBP15.02□□□□□ -0.01
LIN54-206ENST00000506560 BECN1Q14457 450 aa15.02□□□□□ -0.01
LIN54-206ENST00000506560 RILPL2Q969X0 211 aa15.02□□□□□ -0.01
LIN54-206ENST00000506560 IL25Q9H293 177 aa15.02□□□□□ -0.01
LIN54-206ENST00000506560 ZBTB3Q9H5J0 574 aa15.02□□□□□ -0.01
LIN54-206ENST00000506560 ARFGEF2Q9Y6D5 1785 aa15.02□□□□□ -0.01
LIN54-206ENST00000506560 NEXNQ0ZGT2 675 aa15.02□□□□□ -0.01
LIN54-206ENST00000506560 OS9Q13438 667 aaPredicted RBP15.02□□□□□ -0.01
LIN54-206ENST00000506560 UBE3BQ7Z3V4 1068 aa15.02□□□□□ -0.01
LIN54-206ENST00000506560 PAPPAQ13219 1627 aa15.01□□□□□ -0.01
LIN54-206ENST00000506560 TNS2Q63HR2 1409 aa15.01□□□□□ -0.01
LIN54-206ENST00000506560 TRIM6-TRIM34B2RNG4 842 aa15.01□□□□□ -0.01
LIN54-206ENST00000506560 DNAJC10Q8IXB1 793 aa15.01□□□□□ -0.01
LIN54-206ENST00000506560 SYTL4Q96C24 671 aaPredicted RBP15.01□□□□□ -0.01
LIN54-206ENST00000506560 PHLPP1O60346 1717 aa15.01□□□□□ -0.01
LIN54-206ENST00000506560 SLC4A9Q96Q91 983 aa15.01□□□□□ -0.01
LIN54-206ENST00000506560 ATG3Q9NT62 314 aa15.01□□□□□ -0.01
LIN54-206ENST00000506560 COL22A1Q8NFW1 1626 aaPredicted RBP15□□□□□ -0.01
LIN54-206ENST00000506560 AFDNP55196 1824 aaKnown RBP15□□□□□ -0.01
LIN54-206ENST00000506560 KIF1BPQ96EK5 621 aa15□□□□□ -0.01
LIN54-206ENST00000506560 USP26Q9BXU7 913 aa15□□□□□ -0.01
LIN54-206ENST00000506560 STAP2Q9UGK3 403 aa15□□□□□ -0.01
LIN54-206ENST00000506560 ITGB4P16144 1822 aa15□□□□□ -0.01
LIN54-206ENST00000506560 PI4K2BQ8TCG2 481 aa15□□□□□ -0.01
LIN54-206ENST00000506560 RAB11FIP3O75154 756 aa14.99□□□□□ -0.01
LIN54-206ENST00000506560 SASH1O94885 1247 aa14.99□□□□□ -0.01
LIN54-206ENST00000506560 PLBD2Q8NHP8 589 aa14.99□□□□□ -0.01
LIN54-206ENST00000506560 ANTXR1Q9H6X2 564 aa14.99□□□□□ -0.01
LIN54-206ENST00000506560 A0A087WZG4 1122 aa14.99□□□□□ -0.01
LIN54-206ENST00000506560 NFKBIBQ15653 356 aa14.99□□□□□ -0.01
LIN54-206ENST00000506560 A0A0G2JS52 829 aa14.98□□□□□ -0.01
LIN54-206ENST00000506560 PLCH1Q4KWH8 1693 aa14.98□□□□□ -0.01
LIN54-206ENST00000506560 TLR7Q9NYK1 1049 aaKnown RBP14.97□□□□□ -0.01
LIN54-206ENST00000506560 EXOC5O00471 708 aa14.97□□□□□ -0.01
LIN54-206ENST00000506560 CASP7P55210 303 aa14.97□□□□□ -0.01
LIN54-206ENST00000506560 FRAT2O75474 233 aaPredicted RBP14.96□□□□□ -0.01
LIN54-206ENST00000506560 PRIM1P49642 420 aaKnown RBP14.96□□□□□ -0.01
LIN54-206ENST00000506560 CHMLP26374 656 aa14.96□□□□□ -0.01
LIN54-206ENST00000506560 EAF2Q96CJ1 260 aaPredicted RBP14.96□□□□□ -0.01
LIN54-206ENST00000506560 ACSBG1Q96GR2 724 aa14.96□□□□□ -0.01
LIN54-206ENST00000506560 ARXQ96QS3 562 aa14.96□□□□□ -0.01
LIN54-206ENST00000506560 CCDC8Q9H0W5 538 aaPredicted RBP14.96□□□□□ -0.01
LIN54-206ENST00000506560 FOXD4L1Q9NU39 408 aa14.96□□□□□ -0.01
LIN54-206ENST00000506560 SPATA31A1Q5TZJ5 1347 aa14.95□□□□□ -0.02
LIN54-206ENST00000506560 AACSQ86V21 672 aa14.95□□□□□ -0.02
LIN54-206ENST00000506560 ERC2O15083 957 aa14.95□□□□□ -0.02
LIN54-206ENST00000506560 RFX5P48382 616 aaPredicted RBP14.95□□□□□ -0.02
LIN54-206ENST00000506560 ESYT1Q9BSJ8 1104 aa14.95□□□□□ -0.02
LIN54-206ENST00000506560 NUP188Q5SRE5 1749 aa14.95□□□□□ -0.02
LIN54-206ENST00000506560 BCL9O00512 1426 aa14.94□□□□□ -0.02
LIN54-206ENST00000506560 HSCBQ8IWL3 235 aa14.94□□□□□ -0.02
LIN54-206ENST00000506560 CCDC9Q9Y3X0 531 aaKnown RBP14.94□□□□□ -0.02
LIN54-206ENST00000506560 CLASRPQ8N2M8 674 aaKnown RBP14.94□□□□□ -0.02
LIN54-206ENST00000506560 ERBB4Q15303 1308 aa14.93□□□□□ -0.02
LIN54-206ENST00000506560 PTPN12Q05209 780 aaKnown RBP14.93□□□□□ -0.02
LIN54-206ENST00000506560 HSP90AB4PQ58FF6 505 aa14.93□□□□□ -0.02
LIN54-206ENST00000506560 CASC1Q6TDU7 716 aa14.93□□□□□ -0.02
LIN54-206ENST00000506560 LMBR1LQ6UX01 489 aa14.93□□□□□ -0.02
LIN54-206ENST00000506560 NRAPQ86VF7 1730 aa14.93□□□□□ -0.02
LIN54-206ENST00000506560 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.93□□□□□ -0.02
LIN54-206ENST00000506560 UBAP1LF5GYI3 381 aa14.93□□□□□ -0.02
LIN54-206ENST00000506560 G3BP1Q13283 466 aaKnown RBP eCLIP14.93□□□□□ -0.02
LIN54-206ENST00000506560 SYNE4Q8N205 404 aa14.93□□□□□ -0.02
LIN54-206ENST00000506560 PALD1Q9ULE6 856 aa14.93□□□□□ -0.02
LIN54-206ENST00000506560 AK9Q5TCS8 1911 aa14.92□□□□□ -0.02
LIN54-206ENST00000506560 FOXO4P98177 505 aa14.92□□□□□ -0.02
LIN54-206ENST00000506560 MARCH10Q8NA82 808 aaPredicted RBP14.92□□□□□ -0.02
LIN54-206ENST00000506560 ZBTB1Q9Y2K1 713 aa14.92□□□□□ -0.02
LIN54-206ENST00000506560 CHMP3Q9Y3E7 222 aa14.92□□□□□ -0.02
LIN54-206ENST00000506560 TJP1Q07157 1748 aa14.92□□□□□ -0.02
LIN54-206ENST00000506560 WNK3Q9BYP7 1800 aa14.92□□□□□ -0.02
LIN54-206ENST00000506560 TOM1O60784 492 aa14.92□□□□□ -0.02
LIN54-206ENST00000506560 H7C1W4 665 aa14.91□□□□□ -0.02
LIN54-206ENST00000506560 IFIT2P09913 472 aaKnown RBP14.91□□□□□ -0.02
LIN54-206ENST00000506560 DDB1Q16531 1140 aa14.91□□□□□ -0.02
LIN54-206ENST00000506560 HLFQ16534 295 aa14.91□□□□□ -0.02
LIN54-206ENST00000506560 RABL6Q3YEC7 729 aaPredicted RBP14.91□□□□□ -0.02
LIN54-206ENST00000506560 SNX21Q969T3 373 aa14.91□□□□□ -0.02
LIN54-206ENST00000506560 ANO2Q9NQ90 1003 aa14.91□□□□□ -0.02
LIN54-206ENST00000506560 AOX1Q06278 1338 aa14.91□□□□□ -0.02
LIN54-206ENST00000506560 DOT1LQ8TEK3 1739 aa14.91□□□□□ -0.02
LIN54-206ENST00000506560 CCDC85AQ96PX6 553 aaPredicted RBP14.91□□□□□ -0.02
LIN54-206ENST00000506560 CWC25Q9NXE8 425 aaPredicted RBP14.91□□□□□ -0.02
LIN54-206ENST00000506560 NDUFB9Q9Y6M9 179 aa14.91□□□□□ -0.02
LIN54-206ENST00000506560 ZNF594Q96JF6 807 aaPredicted RBP14.9□□□□□ -0.02
LIN54-206ENST00000506560 REC8O95072 547 aa14.9□□□□□ -0.02
LIN54-206ENST00000506560 TFCP2Q12800 502 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms