RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 DACH1Q9UI36 760 aa10.2□□□□□ -0.78
HERC4-213ENST00000506515 DCTN4Q9UJW0 460 aa10.2□□□□□ -0.78
HERC4-213ENST00000506515 ARSJQ5FYB0 599 aaPredicted RBP10.19□□□□□ -0.78
HERC4-213ENST00000506515 ATCAYQ86WG3 371 aa10.19□□□□□ -0.78
HERC4-213ENST00000506515 ETFBKMTQ8IXQ9 262 aa10.19□□□□□ -0.78
HERC4-213ENST00000506515 KLRG1Q96E93 195 aa10.19□□□□□ -0.78
HERC4-213ENST00000506515 A0A1B0GTH6 734 aa10.18□□□□□ -0.78
HERC4-213ENST00000506515 MAN1A2O60476 641 aa10.18□□□□□ -0.78
HERC4-213ENST00000506515 ATP4AP20648 1035 aa10.18□□□□□ -0.78
HERC4-213ENST00000506515 MSX1P28360 303 aa10.18□□□□□ -0.78
HERC4-213ENST00000506515 ALKBH2Q6NS38 261 aa10.18□□□□□ -0.78
HERC4-213ENST00000506515 DNAJC14Q6Y2X3 702 aaPredicted RBP10.18□□□□□ -0.78
HERC4-213ENST00000506515 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.17□□□□□ -0.78
HERC4-213ENST00000506515 C7orf43Q8WVR3 580 aa10.17□□□□□ -0.78
HERC4-213ENST00000506515 HSH2DQ96JZ2 352 aa10.17□□□□□ -0.78
HERC4-213ENST00000506515 SUSD3Q96L08 255 aa10.17□□□□□ -0.78
HERC4-213ENST00000506515 IRX2Q9BZI1 471 aaPredicted RBP10.17□□□□□ -0.78
HERC4-213ENST00000506515 GPAMQ9HCL2 828 aa10.17□□□□□ -0.78
HERC4-213ENST00000506515 NEUROD4Q9HD90 331 aa10.17□□□□□ -0.78
HERC4-213ENST00000506515 CCDC87Q9NVE4 849 aa10.17□□□□□ -0.78
HERC4-213ENST00000506515 BRPF3Q9ULD4 1205 aa10.17□□□□□ -0.78
HERC4-213ENST00000506515 BCS1LQ9Y276 419 aa10.17□□□□□ -0.78
HERC4-213ENST00000506515 SOBPA7XYQ1 873 aa10.16□□□□□ -0.78
HERC4-213ENST00000506515 TREML1Q86YW5 311 aa10.16□□□□□ -0.78
HERC4-213ENST00000506515 ZNF280CQ8ND82 737 aa10.16□□□□□ -0.78
HERC4-213ENST00000506515 GAS2L1Q99501 681 aaPredicted RBP10.16□□□□□ -0.78
HERC4-213ENST00000506515 ANKRD33BA6NCL7 494 aa10.15□□□□□ -0.78
HERC4-213ENST00000506515 NDUFB5O43674 189 aa10.15□□□□□ -0.78
HERC4-213ENST00000506515 FZD6O60353 706 aa10.15□□□□□ -0.78
HERC4-213ENST00000506515 ZAP70P43403 619 aa10.15□□□□□ -0.78
HERC4-213ENST00000506515 HIF1AQ16665 826 aa10.15□□□□□ -0.78
HERC4-213ENST00000506515 NPM2Q86SE8 214 aaKnown RBP10.15□□□□□ -0.78
HERC4-213ENST00000506515 ZIC5Q96T25 663 aa10.15□□□□□ -0.78
HERC4-213ENST00000506515 LRRC69Q6ZNQ3 347 aa10.14□□□□□ -0.79
HERC4-213ENST00000506515 TMC1Q8TDI8 760 aa10.14□□□□□ -0.79
HERC4-213ENST00000506515 RUBCNLQ9H714 662 aa10.14□□□□□ -0.79
HERC4-213ENST00000506515 TGFBR3LH3BV60 316 aa10.13□□□□□ -0.79
HERC4-213ENST00000506515 MICAL2O94851 1124 aa10.13□□□□□ -0.79
HERC4-213ENST00000506515 ERCC3P19447 782 aa10.13□□□□□ -0.79
HERC4-213ENST00000506515 DNM1Q05193 864 aaKnown RBP10.13□□□□□ -0.79
HERC4-213ENST00000506515 ZSCAN29Q8IWY8 852 aaPredicted RBP10.13□□□□□ -0.79
HERC4-213ENST00000506515 ASB16Q96NS5 453 aa10.13□□□□□ -0.79
HERC4-213ENST00000506515 ANKIB1Q9P2G1 1089 aa10.13□□□□□ -0.79
HERC4-213ENST00000506515 DYRK1BQ9Y463 629 aa10.13□□□□□ -0.79
HERC4-213ENST00000506515 GPC6Q9Y625 555 aaPredicted RBP10.13□□□□□ -0.79
HERC4-213ENST00000506515 GJA3Q9Y6H8 435 aa10.13□□□□□ -0.79
HERC4-213ENST00000506515 A0A1W2PNR3 127 aa10.12□□□□□ -0.79
HERC4-213ENST00000506515 F11P03951 625 aa10.12□□□□□ -0.79
HERC4-213ENST00000506515 PGBD3Q8N328 593 aa10.12□□□□□ -0.79
HERC4-213ENST00000506515 EDEM1Q92611 657 aa10.12□□□□□ -0.79
HERC4-213ENST00000506515 POLIQ9UNA4 740 aa10.12□□□□□ -0.79
HERC4-213ENST00000506515 GPR152Q8TDT2 470 aa10.11□□□□□ -0.79
HERC4-213ENST00000506515 ZNF428Q96B54 188 aa10.11□□□□□ -0.79
HERC4-213ENST00000506515 RBCK1Q9BYM8 510 aa10.11□□□□□ -0.79
HERC4-213ENST00000506515 SENP3-EIF4A1A0A087X0R7 540 aa10.1□□□□□ -0.79
HERC4-213ENST00000506515 IDH3AP50213 366 aa10.1□□□□□ -0.79
HERC4-213ENST00000506515 RIPOR1Q6ZS17 1223 aa10.1□□□□□ -0.79
HERC4-213ENST00000506515 TMC7Q7Z402 723 aa10.1□□□□□ -0.79
HERC4-213ENST00000506515 MZF1P28698 734 aaPredicted RBP10.09□□□□□ -0.79
HERC4-213ENST00000506515 RBM25P49756 843 aaKnown RBP10.09□□□□□ -0.79
HERC4-213ENST00000506515 PTSQ03393 145 aa10.09□□□□□ -0.79
HERC4-213ENST00000506515 BTLAQ7Z6A9 289 aa10.09□□□□□ -0.79
HERC4-213ENST00000506515 NPAS4Q8IUM7 802 aa10.09□□□□□ -0.79
HERC4-213ENST00000506515 RGL4Q8IZJ4 473 aa10.09□□□□□ -0.79
HERC4-213ENST00000506515 CRISPLD1Q9H336 500 aa10.09□□□□□ -0.79
HERC4-213ENST00000506515 SENP2Q9HC62 589 aa10.09□□□□□ -0.79
HERC4-213ENST00000506515 DMGDHQ9UI17 866 aaKnown RBP10.09□□□□□ -0.79
HERC4-213ENST00000506515 OPLAHO14841 1288 aa10.08□□□□□ -0.8
HERC4-213ENST00000506515 PDGFAP04085 211 aa10.08□□□□□ -0.8
HERC4-213ENST00000506515 IER5Q5VY09 327 aa10.08□□□□□ -0.8
HERC4-213ENST00000506515 KIFC2Q96AC6 838 aa10.08□□□□□ -0.8
HERC4-213ENST00000506515 NUDT16Q96DE0 195 aaKnown RBP10.08□□□□□ -0.8
HERC4-213ENST00000506515 CITED4Q96RK1 184 aa10.08□□□□□ -0.8
HERC4-213ENST00000506515 GMPR2Q9P2T1 348 aaKnown RBP10.08□□□□□ -0.8
HERC4-213ENST00000506515 AMOTL2Q9Y2J4 779 aa10.08□□□□□ -0.8
HERC4-213ENST00000506515 USP20Q9Y2K6 914 aa10.08□□□□□ -0.8
HERC4-213ENST00000506515 PCSK2P16519 638 aa10.07□□□□□ -0.8
HERC4-213ENST00000506515 Q6ZNB5 142 aa10.07□□□□□ -0.8
HERC4-213ENST00000506515 CEP63Q96MT8 703 aa10.07□□□□□ -0.8
HERC4-213ENST00000506515 BCL2L13Q9BXK5 485 aa10.07□□□□□ -0.8
HERC4-213ENST00000506515 FAM13BQ9NYF5 915 aa10.07□□□□□ -0.8
HERC4-213ENST00000506515 ARSDP51689 593 aa10.06□□□□□ -0.8
HERC4-213ENST00000506515 PDE3BQ13370 1112 aa10.06□□□□□ -0.8
HERC4-213ENST00000506515 C8orf34Q49A92 452 aa10.06□□□□□ -0.8
HERC4-213ENST00000506515 EFHC2Q5JST6 749 aa10.06□□□□□ -0.8
HERC4-213ENST00000506515 TTC16Q8NEE8 873 aa10.06□□□□□ -0.8
HERC4-213ENST00000506515 PIK3R5Q8WYR1 880 aa10.06□□□□□ -0.8
HERC4-213ENST00000506515 TRIM47Q96LD4 638 aa10.06□□□□□ -0.8
HERC4-213ENST00000506515 SLC35F4A4IF30 521 aa10.05□□□□□ -0.8
HERC4-213ENST00000506515 INPP5BP32019 993 aa10.05□□□□□ -0.8
HERC4-213ENST00000506515 USP5P45974 858 aa10.05□□□□□ -0.8
HERC4-213ENST00000506515 GJD3Q8N144 294 aa10.05□□□□□ -0.8
HERC4-213ENST00000506515 CMTR1Q8N1G2 835 aaKnown RBP10.05□□□□□ -0.8
HERC4-213ENST00000506515 TYRO3Q06418 890 aa10.04□□□□□ -0.8
HERC4-213ENST00000506515 NLRP8Q86W28 1048 aa10.04□□□□□ -0.8
HERC4-213ENST00000506515 CCDC155Q8N6L0 562 aa10.04□□□□□ -0.8
HERC4-213ENST00000506515 DMRTB1Q96MA1 342 aa10.04□□□□□ -0.8
HERC4-213ENST00000506515 FAM129BQ96TA1 746 aa10.04□□□□□ -0.8
HERC4-213ENST00000506515 RTCBQ9Y3I0 505 aaKnown RBP10.04□□□□□ -0.8
HERC4-213ENST00000506515 A6NHS1 94 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms