RNA–Protein interactions for RNA: ENST00000506165.1

APBB3-211, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-211ENST00000506165 TTC5Q8N0Z6 440 aa23.28■■□□□ 1.32
APBB3-211ENST00000506165 C7orf43Q8WVR3 580 aa23.28■■□□□ 1.32
APBB3-211ENST00000506165 TEX13AQ9BXU3 409 aaPredicted RBP23.28■■□□□ 1.32
APBB3-211ENST00000506165 CNTNAP1P78357 1384 aa23.27■■□□□ 1.32
APBB3-211ENST00000506165 PPP2R1AP30153 589 aa23.27■■□□□ 1.32
APBB3-211ENST00000506165 MKRN1Q9UHC7 482 aaKnown RBP23.27■■□□□ 1.32
APBB3-211ENST00000506165 A1BGP04217 495 aa23.26■■□□□ 1.31
APBB3-211ENST00000506165 PRPF40BQ6NWY9 871 aaKnown RBP23.26■■□□□ 1.31
APBB3-211ENST00000506165 CNKSR1Q969H4 720 aa23.26■■□□□ 1.31
APBB3-211ENST00000506165 L3MBTL3Q96JM7 780 aaPredicted RBP23.26■■□□□ 1.31
APBB3-211ENST00000506165 GNAT3A8MTJ3 354 aa23.24■■□□□ 1.31
APBB3-211ENST00000506165 FOXN1O15353 648 aa23.24■■□□□ 1.31
APBB3-211ENST00000506165 CNBD1Q8NA66 436 aa23.24■■□□□ 1.31
APBB3-211ENST00000506165 KCNQ3O43525 872 aa23.23■■□□□ 1.31
APBB3-211ENST00000506165 ITGBL1O95965 494 aaPredicted RBP23.23■■□□□ 1.31
APBB3-211ENST00000506165 MASTLQ96GX5 879 aa23.23■■□□□ 1.31
APBB3-211ENST00000506165 SETDB2Q96T68 719 aa23.23■■□□□ 1.31
APBB3-211ENST00000506165 NUP98P52948 1817 aa23.23■■□□□ 1.31
APBB3-211ENST00000506165 KLRG2A4D1S0 409 aaPredicted RBP23.22■■□□□ 1.31
APBB3-211ENST00000506165 TEFQ10587 303 aa23.22■■□□□ 1.31
APBB3-211ENST00000506165 TAF1DQ9H5J8 278 aaPredicted RBP23.22■■□□□ 1.31
APBB3-211ENST00000506165 SNED1Q8TER0 1413 aa23.22■■□□□ 1.31
APBB3-211ENST00000506165 SOGA3Q5TF21 947 aa23.21■■□□□ 1.31
APBB3-211ENST00000506165 LDHDQ86WU2 507 aa23.21■■□□□ 1.31
APBB3-211ENST00000506165 FMNL2Q96PY5 1086 aa23.21■■□□□ 1.31
APBB3-211ENST00000506165 LAMB4A4D0S4 1761 aa23.21■■□□□ 1.31
APBB3-211ENST00000506165 GAS2L2Q8NHY3 880 aa23.2■■□□□ 1.3
APBB3-211ENST00000506165 PRDM10Q9NQV6 1147 aa23.2■■□□□ 1.3
APBB3-211ENST00000506165 ZNF330Q9Y3S2 320 aaPredicted RBP23.2■■□□□ 1.3
APBB3-211ENST00000506165 TRPM7Q96QT4 1865 aa23.19■■□□□ 1.3
APBB3-211ENST00000506165 LTBP1Q14766 1721 aa23.19■■□□□ 1.3
APBB3-211ENST00000506165 THSD7BQ9C0I4 1608 aa23.19■■□□□ 1.3
APBB3-211ENST00000506165 ST5P78524 1137 aa23.19■■□□□ 1.3
APBB3-211ENST00000506165 DZIP3Q86Y13 1208 aaKnown RBP23.19■■□□□ 1.3
APBB3-211ENST00000506165 USP16Q9Y5T5 823 aa23.19■■□□□ 1.3
APBB3-211ENST00000506165 IQCA1LA6NCM1 817 aa23.18■■□□□ 1.3
APBB3-211ENST00000506165 DLG5Q8TDM6 1919 aa23.18■■□□□ 1.3
APBB3-211ENST00000506165 ZNF541Q9H0D2 1346 aa23.17■■□□□ 1.3
APBB3-211ENST00000506165 VEGFBP49765 207 aa23.17■■□□□ 1.3
APBB3-211ENST00000506165 CLEC4GQ6UXB4 293 aa23.17■■□□□ 1.3
APBB3-211ENST00000506165 PRKRIP1Q9H875 184 aaPredicted RBP23.17■■□□□ 1.3
APBB3-211ENST00000506165 PRAMEF22A3QJZ6 481 aa23.16■■□□□ 1.3
APBB3-211ENST00000506165 PIP4K2AP48426 406 aaPredicted RBP23.16■■□□□ 1.3
APBB3-211ENST00000506165 PHACTR3Q96KR7 559 aa23.16■■□□□ 1.3
APBB3-211ENST00000506165 COL4A5P29400 1685 aa23.16■■□□□ 1.3
APBB3-211ENST00000506165 FKBP4Q02790 459 aaKnown RBP eCLIP23.15■■□□□ 1.3
APBB3-211ENST00000506165 RALBP1Q15311 655 aa23.15■■□□□ 1.3
APBB3-211ENST00000506165 CCDC93Q567U6 631 aa23.15■■□□□ 1.3
APBB3-211ENST00000506165 OLFM4Q6UX06 510 aa23.15■■□□□ 1.3
APBB3-211ENST00000506165 TMEM88BA6NKF7 163 aa23.14■■□□□ 1.29
APBB3-211ENST00000506165 WBP1LQ9NX94 342 aa23.14■■□□□ 1.29
APBB3-211ENST00000506165 KDM3BQ7LBC6 1761 aa23.14■■□□□ 1.29
APBB3-211ENST00000506165 BTBD11A6QL63 1104 aa23.13■■□□□ 1.29
APBB3-211ENST00000506165 RGL2O15211 777 aa23.13■■□□□ 1.29
APBB3-211ENST00000506165 NPR1P16066 1061 aa23.13■■□□□ 1.29
APBB3-211ENST00000506165 RSPH6AQ9H0K4 717 aa23.13■■□□□ 1.29
APBB3-211ENST00000506165 NBPF26B4DH59 902 aa23.12■■□□□ 1.29
APBB3-211ENST00000506165 U2SURPO15042 1029 aaKnown RBP23.12■■□□□ 1.29
APBB3-211ENST00000506165 NBPF10Q6P3W6 841 aaKnown RBP23.12■■□□□ 1.29
APBB3-211ENST00000506165 NBPF5PQ86XG9 351 aaPredicted RBP23.12■■□□□ 1.29
APBB3-211ENST00000506165 NBPF15Q8N660 670 aa23.12■■□□□ 1.29
APBB3-211ENST00000506165 ZNF277Q9NRM2 450 aaPredicted RBP23.12■■□□□ 1.29
APBB3-211ENST00000506165 MYBBP1AQ9BQG0 1328 aaKnown RBP23.11■■□□□ 1.29
APBB3-211ENST00000506165 RASSF10A6NK89 507 aa23.11■■□□□ 1.29
APBB3-211ENST00000506165 FZD9O00144 591 aa23.11■■□□□ 1.29
APBB3-211ENST00000506165 CTCFP49711 727 aaPredicted RBP23.11■■□□□ 1.29
APBB3-211ENST00000506165 HACL1Q9UJ83 578 aa23.1■■□□□ 1.29
APBB3-211ENST00000506165 NPHP1O15259 732 aa23.09■■□□□ 1.29
APBB3-211ENST00000506165 EPHX2P34913 555 aa23.09■■□□□ 1.29
APBB3-211ENST00000506165 NPM2Q86SE8 214 aaKnown RBP23.08■■□□□ 1.29
APBB3-211ENST00000506165 RTKN2Q8IZC4 609 aa23.08■■□□□ 1.29
APBB3-211ENST00000506165 RNF123Q5XPI4 1314 aa23.08■■□□□ 1.28
APBB3-211ENST00000506165 SNRPA1P09661 255 aaKnown RBP23.07■■□□□ 1.28
APBB3-211ENST00000506165 PRKAR2BP31323 418 aa23.07■■□□□ 1.28
APBB3-211ENST00000506165 IARSP41252 1262 aaKnown RBP23.07■■□□□ 1.28
APBB3-211ENST00000506165 EAPPQ56P03 285 aaPredicted RBP23.07■■□□□ 1.28
APBB3-211ENST00000506165 TPTE2Q6XPS3 522 aa23.07■■□□□ 1.28
APBB3-211ENST00000506165 ZNF652Q9Y2D9 606 aa23.07■■□□□ 1.28
APBB3-211ENST00000506165 HSPA8P11142 646 aaKnown RBP23.06■■□□□ 1.28
APBB3-211ENST00000506165 LBX1P52954 281 aa23.06■■□□□ 1.28
APBB3-211ENST00000506165 HLFQ16534 295 aa23.06■■□□□ 1.28
APBB3-211ENST00000506165 CCDC184Q52MB2 194 aa23.06■■□□□ 1.28
APBB3-211ENST00000506165 CNTROBQ8N137 903 aa23.06■■□□□ 1.28
APBB3-211ENST00000506165 SYNE4Q8N205 404 aa23.06■■□□□ 1.28
APBB3-211ENST00000506165 NIP7Q9Y221 180 aaKnown RBP eCLIP23.06■■□□□ 1.28
APBB3-211ENST00000506165 CRY2Q49AN0 593 aa23.05■■□□□ 1.28
APBB3-211ENST00000506165 MAP1SQ66K74 1059 aaPredicted RBP23.05■■□□□ 1.28
APBB3-211ENST00000506165 PNMA8AQ86V59 439 aaPredicted RBP23.05■■□□□ 1.28
APBB3-211ENST00000506165 GPC2Q8N158 579 aa23.05■■□□□ 1.28
APBB3-211ENST00000506165 ABCC12Q96J65 1359 aa23.04■■□□□ 1.28
APBB3-211ENST00000506165 DEFB115Q30KQ5 88 aa23.04■■□□□ 1.28
APBB3-211ENST00000506165 AIDAQ96BJ3 306 aa23.04■■□□□ 1.28
APBB3-211ENST00000506165 CFAP53Q96M91 514 aa23.04■■□□□ 1.28
APBB3-211ENST00000506165 PSMD1Q99460 953 aa23.04■■□□□ 1.28
APBB3-211ENST00000506165 LAMB2P55268 1798 aa23.04■■□□□ 1.28
APBB3-211ENST00000506165 RIC1Q4ADV7 1423 aa23.03■■□□□ 1.28
APBB3-211ENST00000506165 ALDH1B1P30837 517 aa23.03■■□□□ 1.28
APBB3-211ENST00000506165 MCM10Q7L590 875 aa23.02■■□□□ 1.28
APBB3-211ENST00000506165 CLEC11AQ9Y240 323 aa23.02■■□□□ 1.28
APBB3-211ENST00000506165 TNRC18O15417 2968 aaPredicted RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms