RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 ARFGEF2Q9Y6D5 1785 aa22.1■■□□□ 1.13
PDLIM7-215ENST00000506161 ARHGAP27Q6ZUM4 889 aa22.1■■□□□ 1.13
PDLIM7-215ENST00000506161 JMYQ8N9B5 988 aa22.1■■□□□ 1.13
PDLIM7-215ENST00000506161 HLFQ16534 295 aa22.09■■□□□ 1.13
PDLIM7-215ENST00000506161 C16orf71Q8IYS4 520 aaPredicted RBP22.09■■□□□ 1.13
PDLIM7-215ENST00000506161 TRIM35Q9UPQ4 493 aa22.09■■□□□ 1.13
PDLIM7-215ENST00000506161 PRELPP51888 382 aa22.08■■□□□ 1.13
PDLIM7-215ENST00000506161 HTRA3P83110 453 aa22.08■■□□□ 1.13
PDLIM7-215ENST00000506161 NEUROD2Q15784 382 aa22.08■■□□□ 1.13
PDLIM7-215ENST00000506161 DALRD3Q5D0E6 543 aaKnown RBP22.08■■□□□ 1.13
PDLIM7-215ENST00000506161 FER1L6Q2WGJ9 1857 aa22.07■■□□□ 1.12
PDLIM7-215ENST00000506161 TNS4Q8IZW8 715 aa22.07■■□□□ 1.12
PDLIM7-215ENST00000506161 PNISRQ8TF01 805 aaKnown RBP22.07■■□□□ 1.12
PDLIM7-215ENST00000506161 PNNQ9H307 717 aaKnown RBP22.07■■□□□ 1.12
PDLIM7-215ENST00000506161 KRT24Q2M2I5 525 aa22.06■■□□□ 1.12
PDLIM7-215ENST00000506161 TTLL7Q6ZT98 887 aa22.06■■□□□ 1.12
PDLIM7-215ENST00000506161 C2CD5Q86YS7 1000 aa22.06■■□□□ 1.12
PDLIM7-215ENST00000506161 NGEFQ8N5V2 710 aa22.06■■□□□ 1.12
PDLIM7-215ENST00000506161 RASSF7Q02833 373 aa22.05■■□□□ 1.12
PDLIM7-215ENST00000506161 FSTL1Q12841 308 aa22.05■■□□□ 1.12
PDLIM7-215ENST00000506161 LRP10Q7Z4F1 713 aa22.05■■□□□ 1.12
PDLIM7-215ENST00000506161 RUNDC1Q96C34 613 aa22.05■■□□□ 1.12
PDLIM7-215ENST00000506161 TSPYL4Q9UJ04 414 aa22.05■■□□□ 1.12
PDLIM7-215ENST00000506161 TIAM2Q8IVF5 1701 aa22.05■■□□□ 1.12
PDLIM7-215ENST00000506161 MYL6BP14649 208 aa22.03■■□□□ 1.12
PDLIM7-215ENST00000506161 WDR43Q15061 677 aaKnown RBP eCLIP22.03■■□□□ 1.12
PDLIM7-215ENST00000506161 PDIA6Q15084 440 aa22.03■■□□□ 1.12
PDLIM7-215ENST00000506161 PROSER3Q2NL68 480 aa22.03■■□□□ 1.12
PDLIM7-215ENST00000506161 SETDB2Q96T68 719 aa22.03■■□□□ 1.12
PDLIM7-215ENST00000506161 ANKRD36CQ5JPF3 1778 aa22.02■■□□□ 1.12
PDLIM7-215ENST00000506161 ANXA1P04083 346 aa22.02■■□□□ 1.12
PDLIM7-215ENST00000506161 C9orf131Q5VYM1 1079 aa22.02■■□□□ 1.12
PDLIM7-215ENST00000506161 CNBD1Q8NA66 436 aa22.01■■□□□ 1.11
PDLIM7-215ENST00000506161 BRIP1Q9BX63 1249 aa22.01■■□□□ 1.11
PDLIM7-215ENST00000506161 DICER1Q9UPY3 1922 aaKnown RBP22.01■■□□□ 1.11
PDLIM7-215ENST00000506161 FAM177BA6PVY3 158 aa22■■□□□ 1.11
PDLIM7-215ENST00000506161 CLEC4GQ6UXB4 293 aa22■■□□□ 1.11
PDLIM7-215ENST00000506161 H0YIN7 160 aa21.99■■□□□ 1.11
PDLIM7-215ENST00000506161 NPM2Q86SE8 214 aaKnown RBP21.99■■□□□ 1.11
PDLIM7-215ENST00000506161 TTLL6Q8N841 843 aa21.99■■□□□ 1.11
PDLIM7-215ENST00000506161 NECTIN2Q92692 538 aa21.99■■□□□ 1.11
PDLIM7-215ENST00000506161 NIP7Q9Y221 180 aaKnown RBP eCLIP21.99■■□□□ 1.11
PDLIM7-215ENST00000506161 KDM2BQ8NHM5 1336 aa21.99■■□□□ 1.11
PDLIM7-215ENST00000506161 ABCC12Q96J65 1359 aa21.99■■□□□ 1.11
PDLIM7-215ENST00000506161 NFKBIEO00221 500 aa21.98■■□□□ 1.11
PDLIM7-215ENST00000506161 CHL1O00533 1208 aa21.98■■□□□ 1.11
PDLIM7-215ENST00000506161 EIF2S2P20042 333 aaKnown RBP21.98■■□□□ 1.11
PDLIM7-215ENST00000506161 ZNF622Q969S3 477 aaKnown RBP eCLIP21.98■■□□□ 1.11
PDLIM7-215ENST00000506161 ZBTB3Q9H5J0 574 aa21.98■■□□□ 1.11
PDLIM7-215ENST00000506161 ZNF219Q9P2Y4 722 aaPredicted RBP21.98■■□□□ 1.11
PDLIM7-215ENST00000506161 MAP3K15Q6ZN16 1313 aa21.98■■□□□ 1.11
PDLIM7-215ENST00000506161 UBN2Q6ZU65 1347 aa21.98■■□□□ 1.11
PDLIM7-215ENST00000506161 ZEB1P37275 1124 aaPredicted RBP21.97■■□□□ 1.11
PDLIM7-215ENST00000506161 NBPF5PQ86XG9 351 aaPredicted RBP21.97■■□□□ 1.11
PDLIM7-215ENST00000506161 RNF181Q9P0P0 153 aa21.97■■□□□ 1.11
PDLIM7-215ENST00000506161 LAMB2P55268 1798 aa21.97■■□□□ 1.11
PDLIM7-215ENST00000506161 APAF1O14727 1248 aa21.96■■□□□ 1.11
PDLIM7-215ENST00000506161 SRGNP10124 158 aa21.96■■□□□ 1.11
PDLIM7-215ENST00000506161 PDE6BP35913 854 aa21.96■■□□□ 1.11
PDLIM7-215ENST00000506161 LMOD3Q0VAK6 560 aa21.96■■□□□ 1.11
PDLIM7-215ENST00000506161 LAS1LQ9Y4W2 734 aaKnown RBP21.96■■□□□ 1.11
PDLIM7-215ENST00000506161 SLC51AQ86UW1 340 aa21.95■■□□□ 1.1
PDLIM7-215ENST00000506161 ZNF652Q9Y2D9 606 aa21.95■■□□□ 1.1
PDLIM7-215ENST00000506161 ZNF316A6NFI3 1004 aaPredicted RBP21.94■■□□□ 1.1
PDLIM7-215ENST00000506161 C21orf2O43822 256 aa21.94■■□□□ 1.1
PDLIM7-215ENST00000506161 GPTP24298 496 aa21.94■■□□□ 1.1
PDLIM7-215ENST00000506161 ST5P78524 1137 aa21.94■■□□□ 1.1
PDLIM7-215ENST00000506161 NUTM1Q86Y26 1132 aa21.94■■□□□ 1.1
PDLIM7-215ENST00000506161 BABAM1Q9NWV8 329 aa21.94■■□□□ 1.1
PDLIM7-215ENST00000506161 ERVV-1B6SEH8 477 aa21.93■■□□□ 1.1
PDLIM7-215ENST00000506161 RGL2O15211 777 aa21.93■■□□□ 1.1
PDLIM7-215ENST00000506161 SMC1BQ8NDV3 1235 aa21.93■■□□□ 1.1
PDLIM7-215ENST00000506161 RRAGCQ9HB90 399 aa21.93■■□□□ 1.1
PDLIM7-215ENST00000506161 ERBB4Q15303 1308 aa21.92■■□□□ 1.1
PDLIM7-215ENST00000506161 KLRG2A4D1S0 409 aaPredicted RBP21.92■■□□□ 1.1
PDLIM7-215ENST00000506161 OLFM4Q6UX06 510 aa21.92■■□□□ 1.1
PDLIM7-215ENST00000506161 NPHP1O15259 732 aa21.91■■□□□ 1.1
PDLIM7-215ENST00000506161 SUSD4Q5VX71 490 aa21.91■■□□□ 1.1
PDLIM7-215ENST00000506161 STYK1Q6J9G0 422 aa21.91■■□□□ 1.1
PDLIM7-215ENST00000506161 PRPF40BQ6NWY9 871 aaKnown RBP21.91■■□□□ 1.1
PDLIM7-215ENST00000506161 ZNF34Q8IZ26 560 aa21.91■■□□□ 1.1
PDLIM7-215ENST00000506161 MBIPQ9NS73 344 aa21.91■■□□□ 1.1
PDLIM7-215ENST00000506161 TAF1P21675 1872 aa21.91■■□□□ 1.1
PDLIM7-215ENST00000506161 ZNF853P0CG23 659 aa21.9■■□□□ 1.1
PDLIM7-215ENST00000506161 ERFEQ4G0M1 354 aa21.9■■□□□ 1.1
PDLIM7-215ENST00000506161 KIF6Q6ZMV9 814 aa21.9■■□□□ 1.1
PDLIM7-215ENST00000506161 HSPA1AP0DMV8 641 aaKnown RBP21.89■■□□□ 1.09
PDLIM7-215ENST00000506161 HSPA1BP0DMV9 641 aaKnown RBP21.89■■□□□ 1.09
PDLIM7-215ENST00000506161 TPTE2Q6XPS3 522 aa21.89■■□□□ 1.09
PDLIM7-215ENST00000506161 GIGYF2Q6Y7W6 1299 aaKnown RBP21.89■■□□□ 1.09
PDLIM7-215ENST00000506161 C3orf67Q6ZVT6 689 aa21.89■■□□□ 1.09
PDLIM7-215ENST00000506161 C7orf43Q8WVR3 580 aa21.89■■□□□ 1.09
PDLIM7-215ENST00000506161 MASTLQ96GX5 879 aa21.89■■□□□ 1.09
PDLIM7-215ENST00000506161 NTSR2O95665 410 aa21.88■■□□□ 1.09
PDLIM7-215ENST00000506161 XAGE3Q8WTP9 111 aa21.88■■□□□ 1.09
PDLIM7-215ENST00000506161 CFAP44Q96MT7 982 aa21.88■■□□□ 1.09
PDLIM7-215ENST00000506161 CHPF2Q9P2E5 772 aa21.88■■□□□ 1.09
PDLIM7-215ENST00000506161 DDX60Q8IY21 1712 aaKnown RBP21.88■■□□□ 1.09
PDLIM7-215ENST00000506161 AIMP1Q12904 312 aaKnown RBP21.87■■□□□ 1.09
PDLIM7-215ENST00000506161 COPS6Q7L5N1 327 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms