RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 RRAGCQ9HB90 399 aa15.92■□□□□ 0.14
PDLIM7-214ENST00000505746 NFKBIEO00221 500 aa15.91■□□□□ 0.14
PDLIM7-214ENST00000505746 SRGNP10124 158 aa15.91■□□□□ 0.14
PDLIM7-214ENST00000505746 SOGA3Q5TF21 947 aa15.91■□□□□ 0.14
PDLIM7-214ENST00000505746 MASTLQ96GX5 879 aa15.91■□□□□ 0.14
PDLIM7-214ENST00000505746 ZNF219Q9P2Y4 722 aaPredicted RBP15.91■□□□□ 0.14
PDLIM7-214ENST00000505746 NIP7Q9Y221 180 aaKnown RBP eCLIP15.91■□□□□ 0.14
PDLIM7-214ENST00000505746 GLTPD2A6NH11 291 aa15.9■□□□□ 0.14
PDLIM7-214ENST00000505746 EIF4A1P60842 406 aaKnown RBP15.9■□□□□ 0.14
PDLIM7-214ENST00000505746 FSTL1Q12841 308 aa15.9■□□□□ 0.14
PDLIM7-214ENST00000505746 PRELPP51888 382 aa15.89■□□□□ 0.13
PDLIM7-214ENST00000505746 DPY19L2Q6NUT2 758 aa15.89■□□□□ 0.13
PDLIM7-214ENST00000505746 THUMPD2Q9BTF0 503 aaKnown RBP15.89■□□□□ 0.13
PDLIM7-214ENST00000505746 ERVV-1B6SEH8 477 aa15.88■□□□□ 0.13
PDLIM7-214ENST00000505746 VEGFAP15692 232 aaPredicted RBP15.88■□□□□ 0.13
PDLIM7-214ENST00000505746 NPR1P16066 1061 aa15.88■□□□□ 0.13
PDLIM7-214ENST00000505746 GTF2E1P29083 439 aaPredicted RBP15.88■□□□□ 0.13
PDLIM7-214ENST00000505746 RIPK4P57078 832 aa15.88■□□□□ 0.13
PDLIM7-214ENST00000505746 DDX10Q13206 875 aaKnown RBP15.88■□□□□ 0.13
PDLIM7-214ENST00000505746 HLFQ16534 295 aa15.88■□□□□ 0.13
PDLIM7-214ENST00000505746 PRPF40BQ6NWY9 871 aaKnown RBP15.88■□□□□ 0.13
PDLIM7-214ENST00000505746 NGEFQ8N5V2 710 aa15.88■□□□□ 0.13
PDLIM7-214ENST00000505746 RRP7AQ9Y3A4 280 aaKnown RBP15.88■□□□□ 0.13
PDLIM7-214ENST00000505746 LTBP3Q9NS15 1303 aa15.88■□□□□ 0.13
PDLIM7-214ENST00000505746 DLEC1Q9Y238 1755 aa15.87■□□□□ 0.13
PDLIM7-214ENST00000505746 KLRG2A4D1S0 409 aaPredicted RBP15.87■□□□□ 0.13
PDLIM7-214ENST00000505746 LMOD3Q0VAK6 560 aa15.87■□□□□ 0.13
PDLIM7-214ENST00000505746 ERFEQ4G0M1 354 aa15.87■□□□□ 0.13
PDLIM7-214ENST00000505746 KIF6Q6ZMV9 814 aa15.87■□□□□ 0.13
PDLIM7-214ENST00000505746 TAOK3Q9H2K8 898 aa15.87■□□□□ 0.13
PDLIM7-214ENST00000505746 TSPYL4Q9UJ04 414 aa15.87■□□□□ 0.13
PDLIM7-214ENST00000505746 FAM177BA6PVY3 158 aa15.86■□□□□ 0.13
PDLIM7-214ENST00000505746 MYL6BP14649 208 aa15.86■□□□□ 0.13
PDLIM7-214ENST00000505746 SMC1BQ8NDV3 1235 aa15.86■□□□□ 0.13
PDLIM7-214ENST00000505746 NYXQ9GZU5 481 aa15.86■□□□□ 0.13
PDLIM7-214ENST00000505746 BABAM1Q9NWV8 329 aa15.86■□□□□ 0.13
PDLIM7-214ENST00000505746 MYBBP1AQ9BQG0 1328 aaKnown RBP15.86■□□□□ 0.13
PDLIM7-214ENST00000505746 ERBB4Q15303 1308 aa15.85■□□□□ 0.13
PDLIM7-214ENST00000505746 MAP3K15Q6ZN16 1313 aa15.85■□□□□ 0.13
PDLIM7-214ENST00000505746 CEP350Q5VT06 3117 aa15.85■□□□□ 0.13
PDLIM7-214ENST00000505746 BCORQ6W2J9 1755 aa15.85■□□□□ 0.13
PDLIM7-214ENST00000505746 ALDH1B1P30837 517 aa15.84■□□□□ 0.13
PDLIM7-214ENST00000505746 TMPOP42166 694 aaKnown RBP15.84■□□□□ 0.13
PDLIM7-214ENST00000505746 CCDC93Q567U6 631 aa15.84■□□□□ 0.13
PDLIM7-214ENST00000505746 ANKRD31Q8N7Z5 1873 aa15.84■□□□□ 0.13
PDLIM7-214ENST00000505746 TTLL7Q6ZT98 887 aa15.83■□□□□ 0.12
PDLIM7-214ENST00000505746 DNAJC5GQ8N7S2 189 aa15.83■□□□□ 0.12
PDLIM7-214ENST00000505746 C7orf43Q8WVR3 580 aa15.83■□□□□ 0.12
PDLIM7-214ENST00000505746 WDR43Q15061 677 aaKnown RBP eCLIP15.82■□□□□ 0.12
PDLIM7-214ENST00000505746 RTKN2Q8IZC4 609 aa15.82■□□□□ 0.12
PDLIM7-214ENST00000505746 ZBTB3Q9H5J0 574 aa15.82■□□□□ 0.12
PDLIM7-214ENST00000505746 SBF1O95248 1867 aa15.82■□□□□ 0.12
PDLIM7-214ENST00000505746 EIF2S2P20042 333 aaKnown RBP15.81■□□□□ 0.12
PDLIM7-214ENST00000505746 COL11A2P13942 1736 aaPredicted RBP15.8■□□□□ 0.12
PDLIM7-214ENST00000505746 TNRC6CQ9HCJ0 1690 aaKnown RBP15.8■□□□□ 0.12
PDLIM7-214ENST00000505746 GPTP24298 496 aa15.8■□□□□ 0.12
PDLIM7-214ENST00000505746 FKBP4Q02790 459 aaKnown RBP eCLIP15.8■□□□□ 0.12
PDLIM7-214ENST00000505746 NEUROD2Q15784 382 aa15.8■□□□□ 0.12
PDLIM7-214ENST00000505746 GIGYF2Q6Y7W6 1299 aaKnown RBP15.8■□□□□ 0.12
PDLIM7-214ENST00000505746 NUTM1Q86Y26 1132 aa15.8■□□□□ 0.12
PDLIM7-214ENST00000505746 RUNDC1Q96C34 613 aa15.8■□□□□ 0.12
PDLIM7-214ENST00000505746 KDM3BQ7LBC6 1761 aa15.8■□□□□ 0.12
PDLIM7-214ENST00000505746 POTECB2RU33 542 aa15.79■□□□□ 0.12
PDLIM7-214ENST00000505746 CRY2Q49AN0 593 aa15.79■□□□□ 0.12
PDLIM7-214ENST00000505746 PARP10Q53GL7 1025 aa15.79■□□□□ 0.12
PDLIM7-214ENST00000505746 PPP1R42Q7Z4L9 355 aa15.79■□□□□ 0.12
PDLIM7-214ENST00000505746 CCDC146Q8IYE0 955 aa15.79■□□□□ 0.12
PDLIM7-214ENST00000505746 ZNF34Q8IZ26 560 aa15.79■□□□□ 0.12
PDLIM7-214ENST00000505746 RPGRQ92834 1020 aaKnown RBP15.79■□□□□ 0.12
PDLIM7-214ENST00000505746 LAMB4A4D0S4 1761 aa15.79■□□□□ 0.12
PDLIM7-214ENST00000505746 IBTKQ9P2D0 1353 aaPredicted RBP15.78■□□□□ 0.12
PDLIM7-214ENST00000505746 DDNO94850 711 aaPredicted RBP15.78■□□□□ 0.12
PDLIM7-214ENST00000505746 PDIA6Q15084 440 aa15.78■□□□□ 0.12
PDLIM7-214ENST00000505746 SUSD4Q5VX71 490 aa15.78■□□□□ 0.12
PDLIM7-214ENST00000505746 UBN2Q6ZU65 1347 aa15.77■□□□□ 0.12
PDLIM7-214ENST00000505746 DLG5Q8TDM6 1919 aa15.77■□□□□ 0.12
PDLIM7-214ENST00000505746 CHL1O00533 1208 aa15.77■□□□□ 0.12
PDLIM7-214ENST00000505746 HOXA10P31260 410 aaPredicted RBP15.77■□□□□ 0.12
PDLIM7-214ENST00000505746 CC2D2BQ6DHV5 1058 aa15.77■□□□□ 0.12
PDLIM7-214ENST00000505746 KLRG1Q96E93 195 aa15.77■□□□□ 0.12
PDLIM7-214ENST00000505746 ABCC12Q96J65 1359 aa15.76■□□□□ 0.11
PDLIM7-214ENST00000505746 SLX4Q8IY92 1834 aa15.76■□□□□ 0.11
PDLIM7-214ENST00000505746 IQCA1LA6NCM1 817 aa15.76■□□□□ 0.11
PDLIM7-214ENST00000505746 NTSR2O95665 410 aa15.76■□□□□ 0.11
PDLIM7-214ENST00000505746 HTRA3P83110 453 aa15.76■□□□□ 0.11
PDLIM7-214ENST00000505746 GRIPAP1Q4V328 841 aa15.76■□□□□ 0.11
PDLIM7-214ENST00000505746 LRP10Q7Z4F1 713 aa15.76■□□□□ 0.11
PDLIM7-214ENST00000505746 RBM17Q96I25 401 aaKnown RBP15.76■□□□□ 0.11
PDLIM7-214ENST00000505746 ZNF277Q9NRM2 450 aaPredicted RBP15.76■□□□□ 0.11
PDLIM7-214ENST00000505746 ADAMTS8Q9UP79 889 aa15.76■□□□□ 0.11
PDLIM7-214ENST00000505746 LAS1LQ9Y4W2 734 aaKnown RBP15.76■□□□□ 0.11
PDLIM7-214ENST00000505746 TIAM2Q8IVF5 1701 aa15.75■□□□□ 0.11
PDLIM7-214ENST00000505746 HSP90AB3PQ58FF7 597 aa15.75■□□□□ 0.11
PDLIM7-214ENST00000505746 OLFM4Q6UX06 510 aa15.75■□□□□ 0.11
PDLIM7-214ENST00000505746 SYNE4Q8N205 404 aa15.75■□□□□ 0.11
PDLIM7-214ENST00000505746 NLRP3Q96P20 1036 aa15.75■□□□□ 0.11
PDLIM7-214ENST00000505746 PSMD1Q99460 953 aa15.75■□□□□ 0.11
PDLIM7-214ENST00000505746 UTP14AQ9BVJ6 771 aaKnown RBP15.75■□□□□ 0.11
PDLIM7-214ENST00000505746 TRIM35Q9UPQ4 493 aa15.75■□□□□ 0.11
PDLIM7-214ENST00000505746 FER1L6Q2WGJ9 1857 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms