RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 PROM2Q8N271 834 aa10.03□□□□□ -0.8
COL4A5-208ENST00000505728 TEX13AQ9BXU3 409 aaPredicted RBP10.03□□□□□ -0.8
COL4A5-208ENST00000505728 ANO8Q9HCE9 1232 aaPredicted RBP10.03□□□□□ -0.8
COL4A5-208ENST00000505728 TMOD3Q9NYL9 352 aa10.03□□□□□ -0.8
COL4A5-208ENST00000505728 MAP3K2Q9Y2U5 619 aa10.03□□□□□ -0.8
COL4A5-208ENST00000505728 BTAF1O14981 1849 aa10.03□□□□□ -0.8
COL4A5-208ENST00000505728 ANP32AP39687 249 aaKnown RBP10.02□□□□□ -0.81
COL4A5-208ENST00000505728 RIC3Q7Z5B4 369 aa10.02□□□□□ -0.81
COL4A5-208ENST00000505728 VSIG10Q8N0Z9 540 aa10.02□□□□□ -0.81
COL4A5-208ENST00000505728 LINS1Q8NG48 757 aa10.02□□□□□ -0.81
COL4A5-208ENST00000505728 LNPKQ9C0E8 428 aa10.02□□□□□ -0.81
COL4A5-208ENST00000505728 BCL11BQ9C0K0 894 aaPredicted RBP10.02□□□□□ -0.81
COL4A5-208ENST00000505728 PDGFDQ9GZP0 370 aaPredicted RBP10.02□□□□□ -0.81
COL4A5-208ENST00000505728 TNS2Q63HR2 1409 aa10.01□□□□□ -0.81
COL4A5-208ENST00000505728 KCNQ2O43526 872 aa10.01□□□□□ -0.81
COL4A5-208ENST00000505728 NEXNQ0ZGT2 675 aa10.01□□□□□ -0.81
COL4A5-208ENST00000505728 AIMP1Q12904 312 aaKnown RBP10.01□□□□□ -0.81
COL4A5-208ENST00000505728 ANKRD13DQ6ZTN6 518 aa10.01□□□□□ -0.81
COL4A5-208ENST00000505728 COPS6Q7L5N1 327 aa10.01□□□□□ -0.81
COL4A5-208ENST00000505728 LRP10Q7Z4F1 713 aa10.01□□□□□ -0.81
COL4A5-208ENST00000505728 XAGE3Q8WTP9 111 aa10.01□□□□□ -0.81
COL4A5-208ENST00000505728 METTL22Q9BUU2 404 aaPredicted RBP10.01□□□□□ -0.81
COL4A5-208ENST00000505728 LRRFIP2Q9Y608 721 aaKnown RBP10.01□□□□□ -0.81
COL4A5-208ENST00000505728 C5P01031 1676 aa10.01□□□□□ -0.81
COL4A5-208ENST00000505728 UBR2Q8IWV8 1755 aa10.01□□□□□ -0.81
COL4A5-208ENST00000505728 PAPPAQ13219 1627 aa10□□□□□ -0.81
COL4A5-208ENST00000505728 MYL6BP14649 208 aa10□□□□□ -0.81
COL4A5-208ENST00000505728 SSH3Q8TE77 659 aa10□□□□□ -0.81
COL4A5-208ENST00000505728 PIGBQ92521 554 aa10□□□□□ -0.81
COL4A5-208ENST00000505728 SPON1Q9HCB6 807 aa10□□□□□ -0.81
COL4A5-208ENST00000505728 C9orf78Q9NZ63 289 aaPredicted RBP10□□□□□ -0.81
COL4A5-208ENST00000505728 LAMB4A4D0S4 1761 aa10□□□□□ -0.81
COL4A5-208ENST00000505728 UTYO14607 1347 aa10□□□□□ -0.81
COL4A5-208ENST00000505728 ITGB4P16144 1822 aa10□□□□□ -0.81
COL4A5-208ENST00000505728 KCPQ6ZWJ8 1503 aa9.99□□□□□ -0.81
COL4A5-208ENST00000505728 RAB11FIP3O75154 756 aa9.99□□□□□ -0.81
COL4A5-208ENST00000505728 POLA2Q14181 598 aa9.99□□□□□ -0.81
COL4A5-208ENST00000505728 BMP2KLQ5H9B9 411 aa9.99□□□□□ -0.81
COL4A5-208ENST00000505728 PLBD2Q8NHP8 589 aa9.99□□□□□ -0.81
COL4A5-208ENST00000505728 ATG3Q9NT62 314 aa9.99□□□□□ -0.81
COL4A5-208ENST00000505728 TUBGCP6Q96RT7 1819 aa9.98□□□□□ -0.81
COL4A5-208ENST00000505728 EIF5BO60841 1220 aaKnown RBP9.98□□□□□ -0.81
COL4A5-208ENST00000505728 NBPF7P0C2Y1 421 aaPredicted RBP9.98□□□□□ -0.81
COL4A5-208ENST00000505728 MTX1Q13505 466 aa9.98□□□□□ -0.81
COL4A5-208ENST00000505728 HSP90AB4PQ58FF6 505 aa9.98□□□□□ -0.81
COL4A5-208ENST00000505728 PLEKHM2Q8IWE5 1019 aa9.98□□□□□ -0.81
COL4A5-208ENST00000505728 IPO9Q96P70 1041 aaKnown RBP9.98□□□□□ -0.81
COL4A5-208ENST00000505728 TOGARAM1Q9Y4F4 1720 aa9.98□□□□□ -0.81
COL4A5-208ENST00000505728 GOLGB1Q14789 3259 aaKnown RBP9.97□□□□□ -0.81
COL4A5-208ENST00000505728 PNMA6EA0A0J9YXQ4 647 aa9.97□□□□□ -0.81
COL4A5-208ENST00000505728 NEURL1BA8MQ27 555 aa9.97□□□□□ -0.81
COL4A5-208ENST00000505728 NBPF26B4DH59 902 aa9.97□□□□□ -0.81
COL4A5-208ENST00000505728 GRM8O00222 908 aa9.97□□□□□ -0.81
COL4A5-208ENST00000505728 PTCD1O75127 700 aaKnown RBP9.97□□□□□ -0.81
COL4A5-208ENST00000505728 STARD3NLO95772 234 aa9.97□□□□□ -0.81
COL4A5-208ENST00000505728 IGKV5-2P06315 115 aa9.97□□□□□ -0.81
COL4A5-208ENST00000505728 TXNRD1Q16881 649 aa9.97□□□□□ -0.81
COL4A5-208ENST00000505728 NBPF10Q6P3W6 841 aaKnown RBP9.97□□□□□ -0.81
COL4A5-208ENST00000505728 PPP1R42Q7Z4L9 355 aa9.97□□□□□ -0.81
COL4A5-208ENST00000505728 NBPF15Q8N660 670 aa9.97□□□□□ -0.81
COL4A5-208ENST00000505728 MYD88Q99836 296 aa9.97□□□□□ -0.81
COL4A5-208ENST00000505728 PPP1R1BQ9UD71 204 aaPredicted RBP9.97□□□□□ -0.81
COL4A5-208ENST00000505728 ASAP1Q9ULH1 1129 aa9.97□□□□□ -0.81
COL4A5-208ENST00000505728 QSER1Q2KHR3 1735 aa9.96□□□□□ -0.81
COL4A5-208ENST00000505728 ZBTB7AO95365 584 aa9.96□□□□□ -0.82
COL4A5-208ENST00000505728 A1BGP04217 495 aa9.96□□□□□ -0.82
COL4A5-208ENST00000505728 PTGER2P43116 358 aa9.96□□□□□ -0.82
COL4A5-208ENST00000505728 GCKRQ14397 625 aa9.96□□□□□ -0.82
COL4A5-208ENST00000505728 CWF19L2Q2TBE0 894 aaKnown RBP9.96□□□□□ -0.82
COL4A5-208ENST00000505728 NPM2Q86SE8 214 aaKnown RBP9.96□□□□□ -0.82
COL4A5-208ENST00000505728 DDRGK1Q96HY6 314 aa9.96□□□□□ -0.82
COL4A5-208ENST00000505728 LRRCC1Q9C099 1032 aa9.96□□□□□ -0.82
COL4A5-208ENST00000505728 OSBPL3Q9H4L5 887 aa9.96□□□□□ -0.82
COL4A5-208ENST00000505728 UPF2Q9HAU5 1272 aaKnown RBP9.96□□□□□ -0.82
COL4A5-208ENST00000505728 NOP58Q9Y2X3 529 aaKnown RBP9.96□□□□□ -0.82
COL4A5-208ENST00000505728 DOT1LQ8TEK3 1739 aa9.96□□□□□ -0.82
COL4A5-208ENST00000505728 CHD4Q14839 1912 aa9.95□□□□□ -0.82
COL4A5-208ENST00000505728 SRGAP3O43295 1099 aa9.95□□□□□ -0.82
COL4A5-208ENST00000505728 SURF6O75683 361 aaKnown RBP9.95□□□□□ -0.82
COL4A5-208ENST00000505728 YY1P25490 414 aa9.95□□□□□ -0.82
COL4A5-208ENST00000505728 PRIM1P49642 420 aaKnown RBP9.95□□□□□ -0.82
COL4A5-208ENST00000505728 DNAJC10Q8IXB1 793 aa9.95□□□□□ -0.82
COL4A5-208ENST00000505728 ACSBG1Q96GR2 724 aa9.95□□□□□ -0.82
COL4A5-208ENST00000505728 RBM42Q9BTD8 480 aaKnown RBP9.95□□□□□ -0.82
COL4A5-208ENST00000505728 EXOC6BQ9Y2D4 811 aa9.95□□□□□ -0.82
COL4A5-208ENST00000505728 COL15A1P39059 1388 aa9.95□□□□□ -0.82
COL4A5-208ENST00000505728 COL24A1Q17RW2 1714 aa9.95□□□□□ -0.82
COL4A5-208ENST00000505728 LY75O60449 1722 aa9.94□□□□□ -0.82
COL4A5-208ENST00000505728 SMARCA5O60264 1052 aaPredicted RBP9.94□□□□□ -0.82
COL4A5-208ENST00000505728 PIP4K2AP48426 406 aaPredicted RBP9.94□□□□□ -0.82
COL4A5-208ENST00000505728 SLC15A2Q16348 729 aa9.94□□□□□ -0.82
COL4A5-208ENST00000505728 TTC22Q5TAA0 569 aa9.94□□□□□ -0.82
COL4A5-208ENST00000505728 C16orf71Q8IYS4 520 aaPredicted RBP9.94□□□□□ -0.82
COL4A5-208ENST00000505728 KIF1BPQ96EK5 621 aa9.94□□□□□ -0.82
COL4A5-208ENST00000505728 SUCLG2Q96I99 432 aa9.94□□□□□ -0.82
COL4A5-208ENST00000505728 STK32BQ9NY57 414 aa9.94□□□□□ -0.82
COL4A5-208ENST00000505728 ATF5Q9Y2D1 282 aaPredicted RBP9.94□□□□□ -0.82
COL4A5-208ENST00000505728 H7C1W4 665 aa9.93□□□□□ -0.82
COL4A5-208ENST00000505728 APBB1O00213 710 aa9.93□□□□□ -0.82
COL4A5-208ENST00000505728 SEC24BO95487 1268 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms