RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 STRN4Q9NRL3 753 aa7.09□□□□□ -1.27
HMGB1P29-201ENST00000505659 PHF24Q9UPV7 400 aa7.09□□□□□ -1.27
HMGB1P29-201ENST00000505659 GJA3Q9Y6H8 435 aa7.09□□□□□ -1.27
HMGB1P29-201ENST00000505659 ARHGEF15O94989 841 aa7.08□□□□□ -1.28
HMGB1P29-201ENST00000505659 MAPTP10636 758 aaKnown RBP7.08□□□□□ -1.28
HMGB1P29-201ENST00000505659 TNP2Q05952 138 aa7.08□□□□□ -1.28
HMGB1P29-201ENST00000505659 GRIN2CQ14957 1233 aa7.08□□□□□ -1.28
HMGB1P29-201ENST00000505659 FIGNL1Q6PIW4 674 aa7.08□□□□□ -1.28
HMGB1P29-201ENST00000505659 ZNF280CQ8ND82 737 aa7.08□□□□□ -1.28
HMGB1P29-201ENST00000505659 SERPINA10Q9UK55 444 aa7.08□□□□□ -1.28
HMGB1P29-201ENST00000505659 FAM181BA6NEQ2 426 aa7.07□□□□□ -1.28
HMGB1P29-201ENST00000505659 BMP4P12644 408 aa7.07□□□□□ -1.28
HMGB1P29-201ENST00000505659 IGFBP4P22692 258 aa7.07□□□□□ -1.28
HMGB1P29-201ENST00000505659 ALDH16A1Q8IZ83 802 aa7.07□□□□□ -1.28
HMGB1P29-201ENST00000505659 ADAMTS8Q9UP79 889 aa7.07□□□□□ -1.28
HMGB1P29-201ENST00000505659 CHMP3Q9Y3E7 222 aa7.07□□□□□ -1.28
HMGB1P29-201ENST00000505659 FAM157BP0CG42 384 aa7.06□□□□□ -1.28
HMGB1P29-201ENST00000505659 WEE1P30291 646 aa7.06□□□□□ -1.28
HMGB1P29-201ENST00000505659 FAM69CQ0P6D2 419 aa7.06□□□□□ -1.28
HMGB1P29-201ENST00000505659 C1orf53Q5VUE5 145 aa7.06□□□□□ -1.28
HMGB1P29-201ENST00000505659 C1orf229Q6ZS94 237 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P29-201ENST00000505659 STAG2Q8N3U4 1231 aa7.06□□□□□ -1.28
HMGB1P29-201ENST00000505659 PRIMPOLQ96LW4 560 aa7.06□□□□□ -1.28
HMGB1P29-201ENST00000505659 OXCT2Q9BYC2 517 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P29-201ENST00000505659 EFSO43281 561 aa7.05□□□□□ -1.28
HMGB1P29-201ENST00000505659 PRMT3O60678 531 aa7.05□□□□□ -1.28
HMGB1P29-201ENST00000505659 ATG7O95352 703 aa7.05□□□□□ -1.28
HMGB1P29-201ENST00000505659 MAP2K3P46734 347 aa7.05□□□□□ -1.28
HMGB1P29-201ENST00000505659 SAMD5Q5TGI4 173 aa7.05□□□□□ -1.28
HMGB1P29-201ENST00000505659 TMEM164Q5U3C3 297 aa7.05□□□□□ -1.28
HMGB1P29-201ENST00000505659 PBXIP1Q96AQ6 731 aa7.05□□□□□ -1.28
HMGB1P29-201ENST00000505659 SUSD3Q96L08 255 aa7.05□□□□□ -1.28
HMGB1P29-201ENST00000505659 NSFL1CQ9UNZ2 370 aaKnown RBP7.05□□□□□ -1.28
HMGB1P29-201ENST00000505659 SHISA8B8ZZ34 492 aa7.04□□□□□ -1.28
HMGB1P29-201ENST00000505659 BCRP11274 1271 aa7.04□□□□□ -1.28
HMGB1P29-201ENST00000505659 MAP3K10Q02779 954 aa7.04□□□□□ -1.28
HMGB1P29-201ENST00000505659 ELOAQ14241 798 aaKnown RBP7.04□□□□□ -1.28
HMGB1P29-201ENST00000505659 NEUROD4Q9HD90 331 aa7.04□□□□□ -1.28
HMGB1P29-201ENST00000505659 ACIN1Q9UKV3 1341 aaKnown RBP7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 SFSWAPQ12872 951 aaKnown RBP7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 FKBP5Q13451 457 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 OCLNQ16625 522 aa7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 QTRT2Q9H974 415 aaKnown RBP7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 KLK14Q9P0G3 267 aa7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 SLAIN2Q9P270 581 aa7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 KLF15Q9UIH9 416 aa7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 GGA1Q9UJY5 639 aa7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 BCS1LQ9Y276 419 aa7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 GPC6Q9Y625 555 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 OIP5O43482 229 aa7.02□□□□□ -1.29
HMGB1P29-201ENST00000505659 TYRO3Q06418 890 aa7.02□□□□□ -1.29
HMGB1P29-201ENST00000505659 CEP63Q96MT8 703 aa7.02□□□□□ -1.29
HMGB1P29-201ENST00000505659 MARK1Q9P0L2 795 aa7.02□□□□□ -1.29
HMGB1P29-201ENST00000505659 TIMELESSQ9UNS1 1208 aa7.02□□□□□ -1.29
HMGB1P29-201ENST00000505659 NEURL1BA8MQ27 555 aa7.01□□□□□ -1.29
HMGB1P29-201ENST00000505659 SUPT5HO00267 1087 aaKnown RBP7.01□□□□□ -1.29
HMGB1P29-201ENST00000505659 FOXO3O43524 673 aa7.01□□□□□ -1.29
HMGB1P29-201ENST00000505659 PCBP4P57723 403 aaKnown RBP7.01□□□□□ -1.29
HMGB1P29-201ENST00000505659 RTN1Q16799 776 aa7.01□□□□□ -1.29
HMGB1P29-201ENST00000505659 SWI5Q1ZZU3 235 aa7.01□□□□□ -1.29
HMGB1P29-201ENST00000505659 CAPN12Q6ZSI9 719 aa7.01□□□□□ -1.29
HMGB1P29-201ENST00000505659 RAB44Q7Z6P3 723 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P29-201ENST00000505659 SLC30A3Q99726 388 aa7.01□□□□□ -1.29
HMGB1P29-201ENST00000505659 BRD7Q9NPI1 651 aa7.01□□□□□ -1.29
HMGB1P29-201ENST00000505659 GSK3AP49840 483 aa7□□□□□ -1.29
HMGB1P29-201ENST00000505659 FAM182BQ5T319 152 aa7□□□□□ -1.29
HMGB1P29-201ENST00000505659 GALNT6Q8NCL4 622 aa7□□□□□ -1.29
HMGB1P29-201ENST00000505659 NEDD1Q8NHV4 660 aa7□□□□□ -1.29
HMGB1P29-201ENST00000505659 MKNK1Q9BUB5 465 aa7□□□□□ -1.29
HMGB1P29-201ENST00000505659 DNMT3AQ9Y6K1 912 aaPredicted RBP7□□□□□ -1.29
HMGB1P29-201ENST00000505659 ARAFP10398 606 aa6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 MARSP56192 900 aaKnown RBP6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 DGKZQ13574 1117 aa6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 SLCO4C1Q6ZQN7 724 aa6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 BTLAQ7Z6A9 289 aa6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 FCHSD1Q86WN1 690 aa6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 GOLGA6L1Q8N7Z2 621 aa6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 EDARADDQ8WWZ3 215 aa6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 VTI1AQ96AJ9 217 aa6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 ANKIB1Q9P2G1 1089 aa6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 GDF2Q9UK05 429 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 LRFN2Q9ULH4 789 aa6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 SNRPNP63162 240 aaKnown RBP6.98□□□□□ -1.29
HMGB1P29-201ENST00000505659 LAMC2Q13753 1193 aa6.98□□□□□ -1.29
HMGB1P29-201ENST00000505659 ZNF468Q5VIY5 522 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P29-201ENST00000505659 SAP130Q9H0E3 1048 aa6.98□□□□□ -1.29
HMGB1P29-201ENST00000505659 CXXC1Q9P0U4 656 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P29-201ENST00000505659 DMGDHQ9UI17 866 aaKnown RBP6.98□□□□□ -1.29
HMGB1P29-201ENST00000505659 PRR12Q9ULL5 1215 aa6.98□□□□□ -1.29
HMGB1P29-201ENST00000505659 CNTNAP5Q8WYK1 1306 aa6.98□□□□□ -1.29
HMGB1P29-201ENST00000505659 CARNS1A5YM72 827 aa6.97□□□□□ -1.29
HMGB1P29-201ENST00000505659 TGFBR3LH3BV60 316 aa6.97□□□□□ -1.29
HMGB1P29-201ENST00000505659 EPXP11678 715 aa6.97□□□□□ -1.29
HMGB1P29-201ENST00000505659 GRNP28799 593 aaKnown RBP6.97□□□□□ -1.29
HMGB1P29-201ENST00000505659 SCNN1AP37088 669 aa6.97□□□□□ -1.29
HMGB1P29-201ENST00000505659 SPEM2Q0P670 501 aa6.97□□□□□ -1.29
HMGB1P29-201ENST00000505659 ARID3AQ99856 593 aa6.97□□□□□ -1.29
HMGB1P29-201ENST00000505659 ENAMQ9NRM1 1142 aa6.97□□□□□ -1.29
HMGB1P29-201ENST00000505659 ADH6P28332 368 aa6.96□□□□□ -1.3
HMGB1P29-201ENST00000505659 IRS1P35568 1242 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms