RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 ADAM33Q9BZ11 813 aa10.03□□□□□ -0.8
VCAN-206ENST00000505615 RRAGCQ9HB90 399 aa10.03□□□□□ -0.8
VCAN-206ENST00000505615 KDM2BQ8NHM5 1336 aa10.03□□□□□ -0.8
VCAN-206ENST00000505615 COL5A3P25940 1745 aaPredicted RBP10.02□□□□□ -0.8
VCAN-206ENST00000505615 EVI5O60447 810 aa10.02□□□□□ -0.81
VCAN-206ENST00000505615 FCHSD2O94868 740 aa10.02□□□□□ -0.81
VCAN-206ENST00000505615 KCNA3P22001 575 aa10.02□□□□□ -0.81
VCAN-206ENST00000505615 PDE4AP27815 886 aa10.02□□□□□ -0.81
VCAN-206ENST00000505615 NBPF6Q5VWK0 638 aa10.02□□□□□ -0.81
VCAN-206ENST00000505615 MPRIPQ6WCQ1 1025 aa10.02□□□□□ -0.81
VCAN-206ENST00000505615 USHBP1Q8N6Y0 703 aa10.02□□□□□ -0.81
VCAN-206ENST00000505615 SMARCC1Q92922 1105 aaPredicted RBP10.02□□□□□ -0.81
VCAN-206ENST00000505615 NBPF4Q96M43 638 aa10.02□□□□□ -0.81
VCAN-206ENST00000505615 PCDH11XQ9BZA7 1347 aa10.02□□□□□ -0.81
VCAN-206ENST00000505615 PCDH11YQ9BZA8 1340 aa10.02□□□□□ -0.81
VCAN-206ENST00000505615 TIAM2Q8IVF5 1701 aa10.02□□□□□ -0.81
VCAN-206ENST00000505615 RTL1A6NKG5 1358 aa10.01□□□□□ -0.81
VCAN-206ENST00000505615 GNPATO15228 680 aa10.01□□□□□ -0.81
VCAN-206ENST00000505615 CYP27B1O15528 508 aa10.01□□□□□ -0.81
VCAN-206ENST00000505615 FBLN1P23142 703 aa10.01□□□□□ -0.81
VCAN-206ENST00000505615 ITPK1Q13572 414 aa10.01□□□□□ -0.81
VCAN-206ENST00000505615 MFSD10Q14728 455 aa10.01□□□□□ -0.81
VCAN-206ENST00000505615 PIGBQ92521 554 aa10.01□□□□□ -0.81
VCAN-206ENST00000505615 ZDHHC16Q969W1 377 aa10.01□□□□□ -0.81
VCAN-206ENST00000505615 DCAF5Q96JK2 942 aa10.01□□□□□ -0.81
VCAN-206ENST00000505615 RNF181Q9P0P0 153 aa10.01□□□□□ -0.81
VCAN-206ENST00000505615 ZNF831Q5JPB2 1677 aa10.01□□□□□ -0.81
VCAN-206ENST00000505615 KDM6AO15550 1401 aaPredicted RBP10□□□□□ -0.81
VCAN-206ENST00000505615 LOC102724428A0A0B4J2F2 783 aa10□□□□□ -0.81
VCAN-206ENST00000505615 SIK1P57059 783 aa10□□□□□ -0.81
VCAN-206ENST00000505615 MRPL50Q8N5N7 158 aaKnown RBP10□□□□□ -0.81
VCAN-206ENST00000505615 WNT2BQ93097 391 aa10□□□□□ -0.81
VCAN-206ENST00000505615 SLC12A5Q9H2X9 1139 aa10□□□□□ -0.81
VCAN-206ENST00000505615 VIRMAQ69YN4 1812 aaKnown RBP9.99□□□□□ -0.81
VCAN-206ENST00000505615 GTPBP6O43824 516 aaPredicted RBP9.99□□□□□ -0.81
VCAN-206ENST00000505615 HDGFL2Q7Z4V5 671 aaPredicted RBP9.99□□□□□ -0.81
VCAN-206ENST00000505615 RAPGEF4Q8WZA2 1011 aa9.99□□□□□ -0.81
VCAN-206ENST00000505615 ROCK2O75116 1388 aaKnown RBP9.99□□□□□ -0.81
VCAN-206ENST00000505615 KDRP35968 1356 aa9.99□□□□□ -0.81
VCAN-206ENST00000505615 NCAPD2Q15021 1401 aa9.99□□□□□ -0.81
VCAN-206ENST00000505615 DLEC1Q9Y238 1755 aa9.98□□□□□ -0.81
VCAN-206ENST00000505615 TATP17735 454 aaPredicted RBP9.98□□□□□ -0.81
VCAN-206ENST00000505615 AMPHP49418 695 aa9.98□□□□□ -0.81
VCAN-206ENST00000505615 DDX27Q96GQ7 796 aaKnown RBP9.98□□□□□ -0.81
VCAN-206ENST00000505615 NBPF3Q9H094 633 aa9.98□□□□□ -0.81
VCAN-206ENST00000505615 CCDC87Q9NVE4 849 aa9.98□□□□□ -0.81
VCAN-206ENST00000505615 DICER1Q9UPY3 1922 aaKnown RBP9.97□□□□□ -0.81
VCAN-206ENST00000505615 FOXN1O15353 648 aa9.97□□□□□ -0.81
VCAN-206ENST00000505615 TMC1Q8TDI8 760 aa9.97□□□□□ -0.81
VCAN-206ENST00000505615 ZC3H4Q9UPT8 1303 aaKnown RBP9.97□□□□□ -0.81
VCAN-206ENST00000505615 PPP1R3GB7ZBB8 358 aa9.96□□□□□ -0.82
VCAN-206ENST00000505615 GYS1P13807 737 aa9.96□□□□□ -0.82
VCAN-206ENST00000505615 TMF1P82094 1093 aa9.96□□□□□ -0.82
VCAN-206ENST00000505615 RRS1Q15050 365 aaKnown RBP9.96□□□□□ -0.82
VCAN-206ENST00000505615 FAM161AQ3B820 660 aa9.96□□□□□ -0.82
VCAN-206ENST00000505615 NLGN1Q8N2Q7 840 aa9.96□□□□□ -0.82
VCAN-206ENST00000505615 L3MBTL2Q969R5 705 aa9.96□□□□□ -0.82
VCAN-206ENST00000505615 LARP6Q9BRS8 491 aaKnown RBP9.96□□□□□ -0.82
VCAN-206ENST00000505615 PRDM10Q9NQV6 1147 aa9.96□□□□□ -0.82
VCAN-206ENST00000505615 EMILIN3Q9NT22 766 aa9.96□□□□□ -0.82
VCAN-206ENST00000505615 PIM2Q9P1W9 311 aa9.96□□□□□ -0.82
VCAN-206ENST00000505615 ASAP1Q9ULH1 1129 aa9.96□□□□□ -0.82
VCAN-206ENST00000505615 SMG6Q86US8 1419 aaKnown RBP9.96□□□□□ -0.82
VCAN-206ENST00000505615 ADAMTS7Q9UKP4 1686 aa9.96□□□□□ -0.82
VCAN-206ENST00000505615 AFDNP55196 1824 aaKnown RBP9.96□□□□□ -0.82
VCAN-206ENST00000505615 RASSF7Q02833 373 aa9.95□□□□□ -0.82
VCAN-206ENST00000505615 DALRD3Q5D0E6 543 aaKnown RBP9.95□□□□□ -0.82
VCAN-206ENST00000505615 COG3Q96JB2 828 aa9.95□□□□□ -0.82
VCAN-206ENST00000505615 TERF2IPQ9NYB0 399 aa9.95□□□□□ -0.82
VCAN-206ENST00000505615 INSRP06213 1382 aa9.94□□□□□ -0.82
VCAN-206ENST00000505615 GLTPD2A6NH11 291 aa9.94□□□□□ -0.82
VCAN-206ENST00000505615 GOLGA8CPA6NN73 597 aa9.94□□□□□ -0.82
VCAN-206ENST00000505615 POTECB2RU33 542 aa9.94□□□□□ -0.82
VCAN-206ENST00000505615 VEGFAP15692 232 aaPredicted RBP9.94□□□□□ -0.82
VCAN-206ENST00000505615 ATP6V1AP38606 617 aa9.94□□□□□ -0.82
VCAN-206ENST00000505615 ARHGEF1Q92888 912 aaKnown RBP9.94□□□□□ -0.82
VCAN-206ENST00000505615 SLC4A9Q96Q91 983 aa9.94□□□□□ -0.82
VCAN-206ENST00000505615 PCDHGA10Q9Y5H3 936 aa9.94□□□□□ -0.82
VCAN-206ENST00000505615 KIF20BQ96Q89 1820 aa9.93□□□□□ -0.82
VCAN-206ENST00000505615 NRXN2Q9P2S2 1712 aa9.93□□□□□ -0.82
VCAN-206ENST00000505615 ANKRD26Q9UPS8 1709 aa9.93□□□□□ -0.82
VCAN-206ENST00000505615 CNTNAP1P78357 1384 aa9.93□□□□□ -0.82
VCAN-206ENST00000505615 CHRNA5P30532 468 aa9.93□□□□□ -0.82
VCAN-206ENST00000505615 DDR1Q08345 913 aa9.93□□□□□ -0.82
VCAN-206ENST00000505615 TRAPPC3LQ5T215 181 aa9.93□□□□□ -0.82
VCAN-206ENST00000505615 MKRN1Q9UHC7 482 aaKnown RBP9.93□□□□□ -0.82
VCAN-206ENST00000505615 RABGEF1Q9UJ41 708 aa9.93□□□□□ -0.82
VCAN-206ENST00000505615 RTCBQ9Y3I0 505 aaKnown RBP9.93□□□□□ -0.82
VCAN-206ENST00000505615 PARP3Q9Y6F1 533 aa9.93□□□□□ -0.82
VCAN-206ENST00000505615 CNTNAP4Q9C0A0 1308 aa9.92□□□□□ -0.82
VCAN-206ENST00000505615 HSP90AB2PQ58FF8 381 aa9.92□□□□□ -0.82
VCAN-206ENST00000505615 ATG3Q9NT62 314 aa9.92□□□□□ -0.82
VCAN-206ENST00000505615 TNRC18O15417 2968 aaPredicted RBP9.92□□□□□ -0.82
VCAN-206ENST00000505615 FER1L6Q2WGJ9 1857 aa9.91□□□□□ -0.82
VCAN-206ENST00000505615 FLT4P35916 1363 aa9.91□□□□□ -0.82
VCAN-206ENST00000505615 TJP1Q07157 1748 aa9.91□□□□□ -0.82
VCAN-206ENST00000505615 ITGBL1O95965 494 aaPredicted RBP9.91□□□□□ -0.82
VCAN-206ENST00000505615 CTCFP49711 727 aaPredicted RBP9.91□□□□□ -0.82
VCAN-206ENST00000505615 MAP3K9P80192 1104 aa9.91□□□□□ -0.82
VCAN-206ENST00000505615 RC3H1Q5TC82 1133 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms