RNA–Protein interactions for RNA: ENST00000505534.5

DDR1-257, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-257ENST00000505534 COL3A1P02461 1466 aaPredicted RBP22.72■■□□□ 1.23
DDR1-257ENST00000505534 SRGNP10124 158 aa22.71■■□□□ 1.23
DDR1-257ENST00000505534 CREBZFQ9NS37 354 aa22.71■■□□□ 1.23
DDR1-257ENST00000505534 BCORQ6W2J9 1755 aa22.71■■□□□ 1.23
DDR1-257ENST00000505534 MASTLQ96GX5 879 aa22.7■■□□□ 1.22
DDR1-257ENST00000505534 CEMIPQ8WUJ3 1361 aa22.69■■□□□ 1.22
DDR1-257ENST00000505534 NPC1L1Q9UHC9 1359 aa22.69■■□□□ 1.22
DDR1-257ENST00000505534 DDNO94850 711 aaPredicted RBP22.69■■□□□ 1.22
DDR1-257ENST00000505534 PRPF40BQ6NWY9 871 aaKnown RBP22.69■■□□□ 1.22
DDR1-257ENST00000505534 SCN4AP35499 1836 aa22.68■■□□□ 1.22
DDR1-257ENST00000505534 BTBD11A6QL63 1104 aa22.68■■□□□ 1.22
DDR1-257ENST00000505534 DZIP3Q86Y13 1208 aaKnown RBP22.68■■□□□ 1.22
DDR1-257ENST00000505534 CLEC4GQ6UXB4 293 aa22.67■■□□□ 1.22
DDR1-257ENST00000505534 IQCA1LA6NCM1 817 aa22.66■■□□□ 1.22
DDR1-257ENST00000505534 KCNQ3O43525 872 aa22.66■■□□□ 1.22
DDR1-257ENST00000505534 POTEIP0CG38 1075 aa22.65■■□□□ 1.22
DDR1-257ENST00000505534 POTEJP0CG39 1038 aa22.65■■□□□ 1.22
DDR1-257ENST00000505534 MKRN1Q9UHC7 482 aaKnown RBP22.65■■□□□ 1.22
DDR1-257ENST00000505534 USP16Q9Y5T5 823 aa22.65■■□□□ 1.22
DDR1-257ENST00000505534 NBPF5PQ86XG9 351 aaPredicted RBP22.64■■□□□ 1.21
DDR1-257ENST00000505534 C7orf43Q8WVR3 580 aa22.64■■□□□ 1.21
DDR1-257ENST00000505534 LDHDQ86WU2 507 aa22.63■■□□□ 1.21
DDR1-257ENST00000505534 L3MBTL3Q96JM7 780 aaPredicted RBP22.63■■□□□ 1.21
DDR1-257ENST00000505534 PHACTR3Q96KR7 559 aa22.63■■□□□ 1.21
DDR1-257ENST00000505534 ZNF652Q9Y2D9 606 aa22.63■■□□□ 1.21
DDR1-257ENST00000505534 NPR1P16066 1061 aa22.62■■□□□ 1.21
DDR1-257ENST00000505534 CCDC93Q567U6 631 aa22.62■■□□□ 1.21
DDR1-257ENST00000505534 KLRG2A4D1S0 409 aaPredicted RBP22.61■■□□□ 1.21
DDR1-257ENST00000505534 PRKAR2BP31323 418 aa22.61■■□□□ 1.21
DDR1-257ENST00000505534 CNGB1Q14028 1251 aaPredicted RBP22.61■■□□□ 1.21
DDR1-257ENST00000505534 TAF1DQ9H5J8 278 aaPredicted RBP22.61■■□□□ 1.21
DDR1-257ENST00000505534 PASKQ96RG2 1323 aa22.6■■□□□ 1.21
DDR1-257ENST00000505534 RGL2O15211 777 aa22.6■■□□□ 1.21
DDR1-257ENST00000505534 SNRPA1P09661 255 aaKnown RBP22.6■■□□□ 1.21
DDR1-257ENST00000505534 PIP4K2AP48426 406 aaPredicted RBP22.6■■□□□ 1.21
DDR1-257ENST00000505534 TPTE2Q6XPS3 522 aa22.6■■□□□ 1.21
DDR1-257ENST00000505534 RSPH6AQ9H0K4 717 aa22.6■■□□□ 1.21
DDR1-257ENST00000505534 CNTNAP1P78357 1384 aa22.6■■□□□ 1.21
DDR1-257ENST00000505534 FKBP4Q02790 459 aaKnown RBP eCLIP22.59■■□□□ 1.21
DDR1-257ENST00000505534 CFAP53Q96M91 514 aa22.59■■□□□ 1.21
DDR1-257ENST00000505534 PRAMEF22A3QJZ6 481 aa22.58■■□□□ 1.21
DDR1-257ENST00000505534 RTF1Q92541 710 aaKnown RBP22.58■■□□□ 1.21
DDR1-257ENST00000505534 RTKN2Q8IZC4 609 aa22.57■■□□□ 1.2
DDR1-257ENST00000505534 NIP7Q9Y221 180 aaKnown RBP eCLIP22.57■■□□□ 1.2
DDR1-257ENST00000505534 NUDCQ9Y266 331 aa22.57■■□□□ 1.2
DDR1-257ENST00000505534 TMEM88BA6NKF7 163 aa22.56■■□□□ 1.2
DDR1-257ENST00000505534 ITGBL1O95965 494 aaPredicted RBP22.56■■□□□ 1.2
DDR1-257ENST00000505534 ZNF277Q9NRM2 450 aaPredicted RBP22.56■■□□□ 1.2
DDR1-257ENST00000505534 FOXN1O15353 648 aa22.55■■□□□ 1.2
DDR1-257ENST00000505534 ALDH1B1P30837 517 aa22.55■■□□□ 1.2
DDR1-257ENST00000505534 PRDM10Q9NQV6 1147 aa22.55■■□□□ 1.2
DDR1-257ENST00000505534 HACL1Q9UJ83 578 aa22.55■■□□□ 1.2
DDR1-257ENST00000505534 NBPF26B4DH59 902 aa22.54■■□□□ 1.2
DDR1-257ENST00000505534 EAPPQ56P03 285 aaPredicted RBP22.54■■□□□ 1.2
DDR1-257ENST00000505534 NBPF10Q6P3W6 841 aaKnown RBP22.54■■□□□ 1.2
DDR1-257ENST00000505534 MCM10Q7L590 875 aa22.54■■□□□ 1.2
DDR1-257ENST00000505534 NBPF15Q8N660 670 aa22.54■■□□□ 1.2
DDR1-257ENST00000505534 ZNF541Q9H0D2 1346 aa22.54■■□□□ 1.2
DDR1-257ENST00000505534 CLEC11AQ9Y240 323 aa22.53■■□□□ 1.2
DDR1-257ENST00000505534 ADAMTSL1Q8N6G6 1762 aa22.53■■□□□ 1.2
DDR1-257ENST00000505534 HTATSF1O43719 755 aaKnown RBP22.52■■□□□ 1.2
DDR1-257ENST00000505534 EPHX2P34913 555 aa22.52■■□□□ 1.2
DDR1-257ENST00000505534 VEGFBP49765 207 aa22.52■■□□□ 1.2
DDR1-257ENST00000505534 OLFM4Q6UX06 510 aa22.52■■□□□ 1.2
DDR1-257ENST00000505534 PNMA8AQ86V59 439 aaPredicted RBP22.52■■□□□ 1.2
DDR1-257ENST00000505534 AIDAQ96BJ3 306 aa22.52■■□□□ 1.2
DDR1-257ENST00000505534 FZD9O00144 591 aa22.51■■□□□ 1.19
DDR1-257ENST00000505534 U2AF1L5P0DN76 240 aaPredicted RBP22.51■■□□□ 1.19
DDR1-257ENST00000505534 GTF2E1P29083 439 aaPredicted RBP22.51■■□□□ 1.19
DDR1-257ENST00000505534 IARSP41252 1262 aaKnown RBP22.51■■□□□ 1.19
DDR1-257ENST00000505534 CTCFP49711 727 aaPredicted RBP22.51■■□□□ 1.19
DDR1-257ENST00000505534 U2AF1Q01081 240 aaKnown RBP eCLIP22.51■■□□□ 1.19
DDR1-257ENST00000505534 SYNE4Q8N205 404 aa22.51■■□□□ 1.19
DDR1-257ENST00000505534 NUP98P52948 1817 aa22.5■■□□□ 1.19
DDR1-257ENST00000505534 FAM177BA6PVY3 158 aa22.5■■□□□ 1.19
DDR1-257ENST00000505534 HLFQ16534 295 aa22.5■■□□□ 1.19
DDR1-257ENST00000505534 DCTN1Q14203 1278 aa22.49■■□□□ 1.19
DDR1-257ENST00000505534 TAF7Q15545 349 aaPredicted RBP22.49■■□□□ 1.19
DDR1-257ENST00000505534 GPC2Q8N158 579 aa22.49■■□□□ 1.19
DDR1-257ENST00000505534 CNTROBQ8N137 903 aa22.48■■□□□ 1.19
DDR1-257ENST00000505534 PSMD1Q99460 953 aa22.48■■□□□ 1.19
DDR1-257ENST00000505534 NYXQ9GZU5 481 aa22.48■■□□□ 1.19
DDR1-257ENST00000505534 WBP1LQ9NX94 342 aa22.48■■□□□ 1.19
DDR1-257ENST00000505534 RNF123Q5XPI4 1314 aa22.48■■□□□ 1.19
DDR1-257ENST00000505534 LAMB4A4D0S4 1761 aa22.48■■□□□ 1.19
DDR1-257ENST00000505534 CRY2Q49AN0 593 aa22.47■■□□□ 1.19
DDR1-257ENST00000505534 CC2D2BQ6DHV5 1058 aa22.47■■□□□ 1.19
DDR1-257ENST00000505534 JDP2Q8WYK2 163 aa22.47■■□□□ 1.19
DDR1-257ENST00000505534 RASSF10A6NK89 507 aa22.46■■□□□ 1.19
DDR1-257ENST00000505534 DEFB115Q30KQ5 88 aa22.46■■□□□ 1.19
DDR1-257ENST00000505534 MAP1SQ66K74 1059 aaPredicted RBP22.46■■□□□ 1.19
DDR1-257ENST00000505534 ERVV-1B6SEH8 477 aa22.45■■□□□ 1.18
DDR1-257ENST00000505534 SNED1Q8TER0 1413 aa22.45■■□□□ 1.18
DDR1-257ENST00000505534 PPP2R1AP30153 589 aa22.44■■□□□ 1.18
DDR1-257ENST00000505534 DLG5Q8TDM6 1919 aa22.44■■□□□ 1.18
DDR1-257ENST00000505534 EIF6P56537 245 aaKnown RBP22.43■■□□□ 1.18
DDR1-257ENST00000505534 GRIPAP1Q4V328 841 aa22.43■■□□□ 1.18
DDR1-257ENST00000505534 MIS18AQ9NYP9 233 aa22.43■■□□□ 1.18
DDR1-257ENST00000505534 HOXA10P31260 410 aaPredicted RBP22.42■■□□□ 1.18
DDR1-257ENST00000505534 LBX1P52954 281 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms