RNA–Protein interactions for RNA: ENST00000505453.1

PDE4D-212, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-212ENST00000505453 CHMP4AQ9BY43 222 aa13.06□□□□□ -0.32
PDE4D-212ENST00000505453 CHMP4BQ9H444 224 aaKnown RBP13.06□□□□□ -0.32
PDE4D-212ENST00000505453 CHPF2Q9P2E5 772 aa13.06□□□□□ -0.32
PDE4D-212ENST00000505453 ADAMTS7Q9UKP4 1686 aa13.06□□□□□ -0.32
PDE4D-212ENST00000505453 SPATA31A1Q5TZJ5 1347 aa13.05□□□□□ -0.32
PDE4D-212ENST00000505453 EXOC5O00471 708 aa13.05□□□□□ -0.32
PDE4D-212ENST00000505453 ANXA1P04083 346 aa13.05□□□□□ -0.32
PDE4D-212ENST00000505453 FKBP5Q13451 457 aaPredicted RBP13.05□□□□□ -0.32
PDE4D-212ENST00000505453 HDAC1Q13547 482 aaPredicted RBP13.05□□□□□ -0.32
PDE4D-212ENST00000505453 SLC4A10Q6U841 1118 aa13.05□□□□□ -0.32
PDE4D-212ENST00000505453 TTC5Q8N0Z6 440 aa13.05□□□□□ -0.32
PDE4D-212ENST00000505453 C1orf115Q9H7X2 142 aa13.05□□□□□ -0.32
PDE4D-212ENST00000505453 MRC1P22897 1456 aa13.04□□□□□ -0.32
PDE4D-212ENST00000505453 CCT4P50991 539 aaKnown RBP13.04□□□□□ -0.32
PDE4D-212ENST00000505453 TMEM92Q6UXU6 159 aa13.04□□□□□ -0.32
PDE4D-212ENST00000505453 FMNL2Q96PY5 1086 aa13.04□□□□□ -0.32
PDE4D-212ENST00000505453 DBF4Q9UBU7 674 aaPredicted RBP13.04□□□□□ -0.32
PDE4D-212ENST00000505453 THRAP3Q9Y2W1 955 aaKnown RBP13.04□□□□□ -0.32
PDE4D-212ENST00000505453 SPATA31A5Q5VU36 1347 aa13.04□□□□□ -0.32
PDE4D-212ENST00000505453 SPATA31A7Q8IWB4 1347 aa13.04□□□□□ -0.32
PDE4D-212ENST00000505453 PKD1L3Q7Z443 1732 aa13.03□□□□□ -0.32
PDE4D-212ENST00000505453 SNRPA1P09661 255 aaKnown RBP13.03□□□□□ -0.32
PDE4D-212ENST00000505453 HSPA1LP34931 641 aa13.03□□□□□ -0.32
PDE4D-212ENST00000505453 PDIA6Q15084 440 aa13.03□□□□□ -0.32
PDE4D-212ENST00000505453 PROSER3Q2NL68 480 aa13.03□□□□□ -0.32
PDE4D-212ENST00000505453 UNC5CLQ8IV45 518 aa13.03□□□□□ -0.32
PDE4D-212ENST00000505453 SPRYD3Q8NCJ5 442 aa13.03□□□□□ -0.32
PDE4D-212ENST00000505453 NGLY1Q96IV0 654 aa13.03□□□□□ -0.32
PDE4D-212ENST00000505453 USP16Q9Y5T5 823 aa13.03□□□□□ -0.32
PDE4D-212ENST00000505453 SLIT2O94813 1529 aa13.02□□□□□ -0.32
PDE4D-212ENST00000505453 C8orf37Q96NL8 207 aa13.02□□□□□ -0.33
PDE4D-212ENST00000505453 CDCA7Q9BWT1 371 aaPredicted RBP13.02□□□□□ -0.33
PDE4D-212ENST00000505453 CCDC9Q9Y3X0 531 aaKnown RBP13.02□□□□□ -0.33
PDE4D-212ENST00000505453 KDM3BQ7LBC6 1761 aa13.01□□□□□ -0.33
PDE4D-212ENST00000505453 SIRT2Q8IXJ6 389 aa13.01□□□□□ -0.33
PDE4D-212ENST00000505453 MEIS3Q99687 375 aa13.01□□□□□ -0.33
PDE4D-212ENST00000505453 DDX21Q9NR30 783 aaKnown RBP eCLIP13.01□□□□□ -0.33
PDE4D-212ENST00000505453 PCDH10Q9P2E7 1040 aa13.01□□□□□ -0.33
PDE4D-212ENST00000505453 PDZRN3Q9UPQ7 1066 aa13.01□□□□□ -0.33
PDE4D-212ENST00000505453 PARP4Q9UKK3 1724 aaKnown RBP13□□□□□ -0.33
PDE4D-212ENST00000505453 SPATA31A6Q5VVP1 1343 aa13□□□□□ -0.33
PDE4D-212ENST00000505453 BARGINQ6ZT62 677 aa13□□□□□ -0.33
PDE4D-212ENST00000505453 PAXIP1Q6ZW49 1069 aaPredicted RBP13□□□□□ -0.33
PDE4D-212ENST00000505453 FNBP4Q8N3X1 1017 aaPredicted RBP13□□□□□ -0.33
PDE4D-212ENST00000505453 PIGBQ92521 554 aa13□□□□□ -0.33
PDE4D-212ENST00000505453 HYPKQ9NX55 129 aa13□□□□□ -0.33
PDE4D-212ENST00000505453 TMOD3Q9NYL9 352 aa13□□□□□ -0.33
PDE4D-212ENST00000505453 PI4KAP2A4QPH2 592 aa12.99□□□□□ -0.33
PDE4D-212ENST00000505453 SOCS7O14512 581 aa12.99□□□□□ -0.33
PDE4D-212ENST00000505453 VPS72Q15906 364 aa12.99□□□□□ -0.33
PDE4D-212ENST00000505453 DDB1Q16531 1140 aa12.99□□□□□ -0.33
PDE4D-212ENST00000505453 PI4KAP1Q8N8J0 262 aa12.99□□□□□ -0.33
PDE4D-212ENST00000505453 RGS3P49796 1198 aa12.98□□□□□ -0.33
PDE4D-212ENST00000505453 BEND3Q5T5X7 828 aa12.98□□□□□ -0.33
PDE4D-212ENST00000505453 SMC5Q8IY18 1101 aa12.98□□□□□ -0.33
PDE4D-212ENST00000505453 DNAAF4Q8WXU2 420 aa12.98□□□□□ -0.33
PDE4D-212ENST00000505453 BCL9LQ86UU0 1499 aa12.98□□□□□ -0.33
PDE4D-212ENST00000505453 PTCD1O75127 700 aaKnown RBP12.97□□□□□ -0.33
PDE4D-212ENST00000505453 MYL6BP14649 208 aa12.97□□□□□ -0.33
PDE4D-212ENST00000505453 AIMP1Q12904 312 aaKnown RBP12.97□□□□□ -0.33
PDE4D-212ENST00000505453 DOK7Q18PE1 504 aa12.97□□□□□ -0.33
PDE4D-212ENST00000505453 KSR2Q6VAB6 950 aa12.97□□□□□ -0.33
PDE4D-212ENST00000505453 RPAP2Q8IXW5 612 aaPredicted RBP12.97□□□□□ -0.33
PDE4D-212ENST00000505453 ANKRD44Q8N8A2 993 aa12.97□□□□□ -0.33
PDE4D-212ENST00000505453 MARCH10Q8NA82 808 aaPredicted RBP12.97□□□□□ -0.33
PDE4D-212ENST00000505453 ATG3Q9NT62 314 aa12.97□□□□□ -0.33
PDE4D-212ENST00000505453 ASAP1Q9ULH1 1129 aa12.97□□□□□ -0.33
PDE4D-212ENST00000505453 SIPA1L3O60292 1781 aaPredicted RBP12.97□□□□□ -0.33
PDE4D-212ENST00000505453 ADCY9O60503 1353 aa12.97□□□□□ -0.33
PDE4D-212ENST00000505453 PIP4K2AP48426 406 aaPredicted RBP12.96□□□□□ -0.33
PDE4D-212ENST00000505453 CEP85Q6P2H3 762 aa12.96□□□□□ -0.33
PDE4D-212ENST00000505453 LRP10Q7Z4F1 713 aa12.96□□□□□ -0.33
PDE4D-212ENST00000505453 SRCIN1Q9C0H9 1055 aa12.96□□□□□ -0.33
PDE4D-212ENST00000505453 USP44Q9H0E7 712 aa12.96□□□□□ -0.33
PDE4D-212ENST00000505453 MAP3K2Q9Y2U5 619 aa12.96□□□□□ -0.33
PDE4D-212ENST00000505453 SCN11AQ9UI33 1791 aa12.96□□□□□ -0.33
PDE4D-212ENST00000505453 LRP6O75581 1613 aa12.96□□□□□ -0.33
PDE4D-212ENST00000505453 GNAI3P08754 354 aa12.96□□□□□ -0.34
PDE4D-212ENST00000505453 PRIM1P49642 420 aaKnown RBP12.96□□□□□ -0.34
PDE4D-212ENST00000505453 FAM98CQ17RN3 349 aaKnown RBP12.96□□□□□ -0.34
PDE4D-212ENST00000505453 COPS6Q7L5N1 327 aa12.96□□□□□ -0.34
PDE4D-212ENST00000505453 ZNF710Q8N1W2 664 aa12.96□□□□□ -0.34
PDE4D-212ENST00000505453 XAGE3Q8WTP9 111 aa12.96□□□□□ -0.34
PDE4D-212ENST00000505453 USP21Q9UK80 565 aa12.96□□□□□ -0.34
PDE4D-212ENST00000505453 RBM19Q9Y4C8 960 aaKnown RBP12.96□□□□□ -0.34
PDE4D-212ENST00000505453 TNS2Q63HR2 1409 aa12.95□□□□□ -0.34
PDE4D-212ENST00000505453 PLCH1Q4KWH8 1693 aa12.95□□□□□ -0.34
PDE4D-212ENST00000505453 NBPF26B4DH59 902 aa12.95□□□□□ -0.34
PDE4D-212ENST00000505453 KIF3CO14782 793 aa12.95□□□□□ -0.34
PDE4D-212ENST00000505453 DDX58O95786 925 aaKnown RBP12.95□□□□□ -0.34
PDE4D-212ENST00000505453 GNAI2P04899 355 aa12.95□□□□□ -0.34
PDE4D-212ENST00000505453 HOXB3P14651 431 aaPredicted RBP12.95□□□□□ -0.34
PDE4D-212ENST00000505453 NBPF14Q5TI25 921 aa12.95□□□□□ -0.34
PDE4D-212ENST00000505453 NBPF10Q6P3W6 841 aaKnown RBP12.95□□□□□ -0.34
PDE4D-212ENST00000505453 NBPF15Q8N660 670 aa12.95□□□□□ -0.34
PDE4D-212ENST00000505453 NRAPQ86VF7 1730 aa12.94□□□□□ -0.34
PDE4D-212ENST00000505453 A1BGP04217 495 aa12.94□□□□□ -0.34
PDE4D-212ENST00000505453 PDE4AP27815 886 aa12.94□□□□□ -0.34
PDE4D-212ENST00000505453 MEX3CQ5U5Q3 659 aaKnown RBP12.94□□□□□ -0.34
PDE4D-212ENST00000505453 MARVELD3Q96A59 401 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms