RNA–Protein interactions for RNA: ENST00000505306.5

ITGA3-204, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 5,479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-204ENST00000505306 PCDH11XQ9BZA7 1347 aa19.45■□□□□ 0.7
ITGA3-204ENST00000505306 PCDH11YQ9BZA8 1340 aa19.45■□□□□ 0.7
ITGA3-204ENST00000505306 F8W031 263 aaPredicted RBP19.45■□□□□ 0.7
ITGA3-204ENST00000505306 CUL5Q93034 780 aa19.44■□□□□ 0.7
ITGA3-204ENST00000505306 NPATQ14207 1427 aa19.44■□□□□ 0.7
ITGA3-204ENST00000505306 FAM98CQ17RN3 349 aaKnown RBP19.44■□□□□ 0.7
ITGA3-204ENST00000505306 CCDC196A0A1B0GTZ2 297 aa19.44■□□□□ 0.7
ITGA3-204ENST00000505306 TRAPPC3LQ5T215 181 aa19.43■□□□□ 0.7
ITGA3-204ENST00000505306 DDX11Q96FC9 970 aa19.43■□□□□ 0.7
ITGA3-204ENST00000505306 USP21Q9UK80 565 aa19.43■□□□□ 0.7
ITGA3-204ENST00000505306 PODXL2Q9NZ53 605 aa19.43■□□□□ 0.7
ITGA3-204ENST00000505306 CCNL1Q9UK58 526 aaPredicted RBP19.43■□□□□ 0.7
ITGA3-204ENST00000505306 POLKQ9UBT6 870 aa19.43■□□□□ 0.7
ITGA3-204ENST00000505306 K7ELQ4 463 aaPredicted RBP19.42■□□□□ 0.7
ITGA3-204ENST00000505306 SLC4A8Q2Y0W8 1093 aa19.42■□□□□ 0.7
ITGA3-204ENST00000505306 C20orf194Q5TEA3 1177 aa19.42■□□□□ 0.7
ITGA3-204ENST00000505306 ZSCAN30Q86W11 494 aa19.42■□□□□ 0.7
ITGA3-204ENST00000505306 GSTO1P78417 241 aa19.42■□□□□ 0.7
ITGA3-204ENST00000505306 UQCRFS1P1P0C7P4 283 aa19.42■□□□□ 0.7
ITGA3-204ENST00000505306 KRT85P78386 507 aa19.42■□□□□ 0.7
ITGA3-204ENST00000505306 MTHFSDQ2M296 383 aaKnown RBP19.42■□□□□ 0.7
ITGA3-204ENST00000505306 CCDC82Q8N4S0 544 aa19.42■□□□□ 0.7
ITGA3-204ENST00000505306 IP6K1Q92551 441 aa19.42■□□□□ 0.7
ITGA3-204ENST00000505306 TANGO6Q9C0B7 1094 aa19.42■□□□□ 0.7
ITGA3-204ENST00000505306 ZC3H12CQ9C0D7 883 aaKnown RBP19.42■□□□□ 0.7
ITGA3-204ENST00000505306 WDR33Q9C0J8 1336 aaKnown RBP19.42■□□□□ 0.7
ITGA3-204ENST00000505306 ECHDC1Q9NTX5 307 aa19.41■□□□□ 0.7
ITGA3-204ENST00000505306 CIZ1Q9ULV3 898 aaPredicted RBP19.41■□□□□ 0.7
ITGA3-204ENST00000505306 IQSEC3Q9UPP2 1182 aaPredicted RBP19.41■□□□□ 0.7
ITGA3-204ENST00000505306 NKTRP30414 1462 aaKnown RBP19.41■□□□□ 0.7
ITGA3-204ENST00000505306 TRIM27P14373 513 aa19.41■□□□□ 0.7
ITGA3-204ENST00000505306 KAT6BQ8WYB5 2073 aa19.41■□□□□ 0.7
ITGA3-204ENST00000505306 SMC2O95347 1197 aa19.41■□□□□ 0.7
ITGA3-204ENST00000505306 HOXC9P31274 260 aa19.41■□□□□ 0.7
ITGA3-204ENST00000505306 NSFL1CQ9UNZ2 370 aaKnown RBP19.41■□□□□ 0.7
ITGA3-204ENST00000505306 PTPRKQ15262 1439 aa19.4■□□□□ 0.7
ITGA3-204ENST00000505306 IFIT3O14879 490 aaKnown RBP19.4■□□□□ 0.7
ITGA3-204ENST00000505306 SLC12A7Q9Y666 1083 aa19.4■□□□□ 0.7
ITGA3-204ENST00000505306 YTHDC2Q9H6S0 1430 aaKnown RBP19.4■□□□□ 0.7
ITGA3-204ENST00000505306 ABCC1P33527 1531 aa19.4■□□□□ 0.7
ITGA3-204ENST00000505306 PDE4BQ07343 736 aa19.4■□□□□ 0.7
ITGA3-204ENST00000505306 EYA1Q99502 592 aa19.4■□□□□ 0.7
ITGA3-204ENST00000505306 TSPY2A6NKD2 308 aa19.39■□□□□ 0.69
ITGA3-204ENST00000505306 RBM26Q5T8P6 1007 aaKnown RBP19.39■□□□□ 0.69
ITGA3-204ENST00000505306 DDX17Q92841 729 aaKnown RBP19.39■□□□□ 0.69
ITGA3-204ENST00000505306 NF2P35240 595 aa19.39■□□□□ 0.69
ITGA3-204ENST00000505306 MPNDQ8N594 471 aa19.39■□□□□ 0.69
ITGA3-204ENST00000505306 CRNKL1Q9BZJ0 848 aaKnown RBP19.39■□□□□ 0.69
ITGA3-204ENST00000505306 IL16Q14005 1332 aa19.39■□□□□ 0.69
ITGA3-204ENST00000505306 LMBR1LQ6UX01 489 aa19.38■□□□□ 0.69
ITGA3-204ENST00000505306 PPP4R3AQ6IN85 833 aa19.38■□□□□ 0.69
ITGA3-204ENST00000505306 FBXO3Q9UK99 471 aa19.38■□□□□ 0.69
ITGA3-204ENST00000505306 CTTNBP2Q8WZ74 1663 aa19.38■□□□□ 0.69
ITGA3-204ENST00000505306 LETM1O95202 739 aaPredicted RBP19.38■□□□□ 0.69
ITGA3-204ENST00000505306 ATP2B3Q16720 1220 aa19.38■□□□□ 0.69
ITGA3-204ENST00000505306 ZNF804AQ7Z570 1209 aa19.38■□□□□ 0.69
ITGA3-204ENST00000505306 ZGPATQ8N5A5 531 aaKnown RBP19.38■□□□□ 0.69
ITGA3-204ENST00000505306 ARGLU1Q9NWB6 273 aaPredicted RBP19.38■□□□□ 0.69
ITGA3-204ENST00000505306 CCDC66A2RUB6 948 aa19.38■□□□□ 0.69
ITGA3-204ENST00000505306 TRIM5Q9C035 493 aa19.38■□□□□ 0.69
ITGA3-204ENST00000505306 TTLL5Q6EMB2 1281 aa19.38■□□□□ 0.69
ITGA3-204ENST00000505306 KSR2Q6VAB6 950 aa19.38■□□□□ 0.69
ITGA3-204ENST00000505306 CATIPQ7Z7H3 387 aa19.38■□□□□ 0.69
ITGA3-204ENST00000505306 MAP3K19Q56UN5 1328 aa19.37■□□□□ 0.69
ITGA3-204ENST00000505306 CEP170Q5SW79 1584 aa19.37■□□□□ 0.69
ITGA3-204ENST00000505306 EVI5LQ96CN4 794 aa19.37■□□□□ 0.69
ITGA3-204ENST00000505306 EHMT1Q9H9B1 1298 aa19.37■□□□□ 0.69
ITGA3-204ENST00000505306 SMARCE1Q969G3 411 aa19.37■□□□□ 0.69
ITGA3-204ENST00000505306 DACH1Q9UI36 760 aa19.37■□□□□ 0.69
ITGA3-204ENST00000505306 VEZTQ9HBM0 779 aa19.36■□□□□ 0.69
ITGA3-204ENST00000505306 CEP131Q9UPN4 1083 aa19.36■□□□□ 0.69
ITGA3-204ENST00000505306 PRAG1Q86YV5 1406 aa19.36■□□□□ 0.69
ITGA3-204ENST00000505306 BAG6P46379 1132 aa19.36■□□□□ 0.69
ITGA3-204ENST00000505306 CFAP45Q9UL16 551 aa19.36■□□□□ 0.69
ITGA3-204ENST00000505306 RDXP35241 583 aaKnown RBP19.36■□□□□ 0.69
ITGA3-204ENST00000505306 MNS1Q8NEH6 495 aa19.36■□□□□ 0.69
ITGA3-204ENST00000505306 PUS7Q96PZ0 661 aaKnown RBP19.36■□□□□ 0.69
ITGA3-204ENST00000505306 UPF3BQ9BZI7 483 aaKnown RBP19.36■□□□□ 0.69
ITGA3-204ENST00000505306 HMGB1P09429 215 aaKnown RBP19.35■□□□□ 0.69
ITGA3-204ENST00000505306 GRM8O00222 908 aa19.35■□□□□ 0.69
ITGA3-204ENST00000505306 SPATA32Q96LK8 384 aa19.35■□□□□ 0.69
ITGA3-204ENST00000505306 VAT1LQ9HCJ6 419 aa19.35■□□□□ 0.69
ITGA3-204ENST00000505306 CEP57L1Q8IYX8 460 aa19.35■□□□□ 0.69
ITGA3-204ENST00000505306 EYA3Q99504 573 aa19.35■□□□□ 0.69
ITGA3-204ENST00000505306 LMOD1P29536 600 aaPredicted RBP19.35■□□□□ 0.69
ITGA3-204ENST00000505306 RALGAPBQ86X10 1494 aa19.34■□□□□ 0.69
ITGA3-204ENST00000505306 GOLGA8AA7E2F4 631 aa19.34■□□□□ 0.69
ITGA3-204ENST00000505306 GOLGA8BA8MQT2 603 aa19.34■□□□□ 0.69
ITGA3-204ENST00000505306 IRS4O14654 1257 aaPredicted RBP19.34■□□□□ 0.69
ITGA3-204ENST00000505306 RIMBP2O15034 1052 aa19.34■□□□□ 0.69
ITGA3-204ENST00000505306 ALDH1L1O75891 902 aa19.34■□□□□ 0.69
ITGA3-204ENST00000505306 APBA3O96018 575 aa19.34■□□□□ 0.69
ITGA3-204ENST00000505306 CYP7A1P22680 504 aa19.34■□□□□ 0.69
ITGA3-204ENST00000505306 CNBD1Q8NA66 436 aa19.34■□□□□ 0.69
ITGA3-204ENST00000505306 KAT14Q9H8E8 782 aa19.34■□□□□ 0.69
ITGA3-204ENST00000505306 ZNHIT6Q9NWK9 470 aaKnown RBP19.34■□□□□ 0.69
ITGA3-204ENST00000505306 RNMTO43148 476 aaKnown RBP19.33■□□□□ 0.69
ITGA3-204ENST00000505306 PICALMQ13492 652 aa19.33■□□□□ 0.69
ITGA3-204ENST00000505306 ARHGEF10O15013 1369 aa19.33■□□□□ 0.69
ITGA3-204ENST00000505306 MAP3K5Q99683 1374 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms