RNA–Protein interactions for RNA: ENST00000505225.1

RERE-216, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 2

Gene RERE, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-216ENST00000505225 C7orf43Q8WVR3 580 aa9.42□□□□□ -0.9
RERE-216ENST00000505225 TAOK3Q9H2K8 898 aa9.42□□□□□ -0.9
RERE-216ENST00000505225 DDX60Q8IY21 1712 aaKnown RBP9.42□□□□□ -0.9
RERE-216ENST00000505225 ZNF541Q9H0D2 1346 aa9.41□□□□□ -0.9
RERE-216ENST00000505225 A0A087WZG4 1122 aa9.41□□□□□ -0.9
RERE-216ENST00000505225 KLRG2A4D1S0 409 aaPredicted RBP9.41□□□□□ -0.9
RERE-216ENST00000505225 FOXN1O15353 648 aa9.41□□□□□ -0.9
RERE-216ENST00000505225 PDE6BP35913 854 aa9.41□□□□□ -0.9
RERE-216ENST00000505225 CCDC24Q8N4L8 307 aa9.41□□□□□ -0.9
RERE-216ENST00000505225 IL17REQ8NFR9 667 aa9.41□□□□□ -0.9
RERE-216ENST00000505225 KNSTRNQ9Y448 316 aa9.41□□□□□ -0.9
RERE-216ENST00000505225 DDNO94850 711 aaPredicted RBP9.4□□□□□ -0.9
RERE-216ENST00000505225 STARD3NLO95772 234 aa9.4□□□□□ -0.9
RERE-216ENST00000505225 BICDL1Q6ZP65 573 aa9.4□□□□□ -0.9
RERE-216ENST00000505225 CNBD1Q8NA66 436 aa9.4□□□□□ -0.9
RERE-216ENST00000505225 MKRN1Q9UHC7 482 aaKnown RBP9.4□□□□□ -0.9
RERE-216ENST00000505225 DUOX1Q9NRD9 1551 aa9.4□□□□□ -0.9
RERE-216ENST00000505225 PSME4Q14997 1843 aa9.4□□□□□ -0.91
RERE-216ENST00000505225 ABCC12Q96J65 1359 aa9.39□□□□□ -0.91
RERE-216ENST00000505225 TAF1P21675 1872 aa9.39□□□□□ -0.91
RERE-216ENST00000505225 RGL2O15211 777 aa9.39□□□□□ -0.91
RERE-216ENST00000505225 DIAPH1O60610 1272 aaKnown RBP9.39□□□□□ -0.91
RERE-216ENST00000505225 ITGBL1O95965 494 aaPredicted RBP9.39□□□□□ -0.91
RERE-216ENST00000505225 DPY19L2Q6NUT2 758 aa9.39□□□□□ -0.91
RERE-216ENST00000505225 LDHDQ86WU2 507 aa9.39□□□□□ -0.91
RERE-216ENST00000505225 TTC5Q8N0Z6 440 aa9.39□□□□□ -0.91
RERE-216ENST00000505225 ZNF622Q969S3 477 aaKnown RBP eCLIP9.39□□□□□ -0.916e-7■■□□□ 12.1
RERE-216ENST00000505225 MASTLQ96GX5 879 aa9.39□□□□□ -0.91
RERE-216ENST00000505225 TAF1DQ9H5J8 278 aaPredicted RBP9.39□□□□□ -0.91
RERE-216ENST00000505225 PRDM10Q9NQV6 1147 aa9.39□□□□□ -0.91
RERE-216ENST00000505225 TBC1D2BQ9UPU7 963 aa9.39□□□□□ -0.91
RERE-216ENST00000505225 ZNF646O15015 1829 aaPredicted RBP9.38□□□□□ -0.91
RERE-216ENST00000505225 GNAT3A8MTJ3 354 aa9.38□□□□□ -0.91
RERE-216ENST00000505225 KCNQ3O43525 872 aa9.38□□□□□ -0.91
RERE-216ENST00000505225 A1BGP04217 495 aa9.38□□□□□ -0.91
RERE-216ENST00000505225 SOGA3Q5TF21 947 aa9.38□□□□□ -0.91
RERE-216ENST00000505225 CNKSR1Q969H4 720 aa9.38□□□□□ -0.91
RERE-216ENST00000505225 FMNL2Q96PY5 1086 aa9.38□□□□□ -0.91
RERE-216ENST00000505225 TEX13AQ9BXU3 409 aaPredicted RBP9.38□□□□□ -0.91
RERE-216ENST00000505225 ZNF219Q9P2Y4 722 aaPredicted RBP9.38□□□□□ -0.91
RERE-216ENST00000505225 IBTKQ9P2D0 1353 aaPredicted RBP9.37□□□□□ -0.91
RERE-216ENST00000505225 PRAMEF22A3QJZ6 481 aa9.37□□□□□ -0.91
RERE-216ENST00000505225 IQCA1LA6NCM1 817 aa9.37□□□□□ -0.91
RERE-216ENST00000505225 RASSF10A6NK89 507 aa9.37□□□□□ -0.91
RERE-216ENST00000505225 VEGFBP49765 207 aa9.37□□□□□ -0.91
RERE-216ENST00000505225 ST5P78524 1137 aa9.37□□□□□ -0.91
RERE-216ENST00000505225 FKBP4Q02790 459 aaKnown RBP eCLIP9.37□□□□□ -0.91
RERE-216ENST00000505225 CCDC93Q567U6 631 aa9.37□□□□□ -0.91
RERE-216ENST00000505225 DZIP3Q86Y13 1208 aaKnown RBP9.37□□□□□ -0.91
RERE-216ENST00000505225 GAS2L2Q8NHY3 880 aa9.37□□□□□ -0.91
RERE-216ENST00000505225 RSPH6AQ9H0K4 717 aa9.37□□□□□ -0.91
RERE-216ENST00000505225 FZD9O00144 591 aa9.36□□□□□ -0.91
RERE-216ENST00000505225 TEFQ10587 303 aa9.36□□□□□ -0.91
RERE-216ENST00000505225 OLFM4Q6UX06 510 aa9.36□□□□□ -0.91
RERE-216ENST00000505225 CLEC4GQ6UXB4 293 aa9.36□□□□□ -0.91
RERE-216ENST00000505225 SETDB2Q96T68 719 aa9.36□□□□□ -0.91
RERE-216ENST00000505225 WBP1LQ9NX94 342 aa9.36□□□□□ -0.91
RERE-216ENST00000505225 RNF123Q5XPI4 1314 aa9.35□□□□□ -0.91
RERE-216ENST00000505225 TMEM88BA6NKF7 163 aa9.35□□□□□ -0.91
RERE-216ENST00000505225 NBPF26B4DH59 902 aa9.35□□□□□ -0.91
RERE-216ENST00000505225 HSPA8P11142 646 aaKnown RBP9.35□□□□□ -0.91
RERE-216ENST00000505225 NPR1P16066 1061 aa9.35□□□□□ -0.91
RERE-216ENST00000505225 PIP4K2AP48426 406 aaPredicted RBP9.35□□□□□ -0.91
RERE-216ENST00000505225 CRY2Q49AN0 593 aa9.35□□□□□ -0.91
RERE-216ENST00000505225 NBPF10Q6P3W6 841 aaKnown RBP9.35□□□□□ -0.91
RERE-216ENST00000505225 NBPF15Q8N660 670 aa9.35□□□□□ -0.91
RERE-216ENST00000505225 PHACTR3Q96KR7 559 aa9.35□□□□□ -0.91
RERE-216ENST00000505225 PCDH10Q9P2E7 1040 aa9.35□□□□□ -0.91
RERE-216ENST00000505225 USP16Q9Y5T5 823 aa9.35□□□□□ -0.91
RERE-216ENST00000505225 CASP8AP2Q9UKL3 1982 aa9.35□□□□□ -0.91
RERE-216ENST00000505225 COL4A1P02462 1669 aa9.35□□□□□ -0.91
RERE-216ENST00000505225 LAMB1P07942 1786 aa9.35□□□□□ -0.91
RERE-216ENST00000505225 CTCFP49711 727 aaPredicted RBP9.34□□□□□ -0.91
RERE-216ENST00000505225 SLC51AQ86UW1 340 aa9.34□□□□□ -0.91
RERE-216ENST00000505225 PIAS4Q8N2W9 510 aaPredicted RBP9.34□□□□□ -0.91
RERE-216ENST00000505225 ZNF277Q9NRM2 450 aaPredicted RBP9.34□□□□□ -0.91
RERE-216ENST00000505225 ZNF330Q9Y3S2 320 aaPredicted RBP9.34□□□□□ -0.91
RERE-216ENST00000505225 BTBD11A6QL63 1104 aa9.33□□□□□ -0.92
RERE-216ENST00000505225 PRKAR2BP31323 418 aa9.33□□□□□ -0.92
RERE-216ENST00000505225 EPHX2P34913 555 aa9.33□□□□□ -0.92
RERE-216ENST00000505225 IARSP41252 1262 aaKnown RBP9.33□□□□□ -0.92
RERE-216ENST00000505225 CC2D1BQ5T0F9 858 aaKnown RBP9.33□□□□□ -0.92
RERE-216ENST00000505225 NBPF5PQ86XG9 351 aaPredicted RBP9.33□□□□□ -0.92
RERE-216ENST00000505225 PSMD1Q99460 953 aa9.33□□□□□ -0.92
RERE-216ENST00000505225 HACL1Q9UJ83 578 aa9.33□□□□□ -0.92
RERE-216ENST00000505225 POLR2AP24928 1970 aaKnown RBP9.33□□□□□ -0.92
RERE-216ENST00000505225 SCN9AQ15858 1988 aa9.33□□□□□ -0.92
RERE-216ENST00000505225 SCNN1DP51172 638 aa9.32□□□□□ -0.92
RERE-216ENST00000505225 GPC2Q8N158 579 aa9.32□□□□□ -0.92
RERE-216ENST00000505225 ZNF652Q9Y2D9 606 aa9.32□□□□□ -0.92
RERE-216ENST00000505225 AKAP11Q9UKA4 1901 aa9.32□□□□□ -0.92
RERE-216ENST00000505225 UBN2Q6ZU65 1347 aa9.31□□□□□ -0.92
RERE-216ENST00000505225 PDE4DIPQ5VU43 2346 aa9.31□□□□□ -0.92
RERE-216ENST00000505225 U2SURPO15042 1029 aaKnown RBP9.31□□□□□ -0.92
RERE-216ENST00000505225 SNRPA1P09661 255 aaKnown RBP9.31□□□□□ -0.92
RERE-216ENST00000505225 LBX1P52954 281 aa9.31□□□□□ -0.92
RERE-216ENST00000505225 HLFQ16534 295 aa9.31□□□□□ -0.92
RERE-216ENST00000505225 MAP1SQ66K74 1059 aaPredicted RBP9.31□□□□□ -0.92
RERE-216ENST00000505225 PNMA8AQ86V59 439 aaPredicted RBP9.31□□□□□ -0.92
RERE-216ENST00000505225 RTKN2Q8IZC4 609 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms