RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 STYK1Q6J9G0 422 aa21.6■■□□□ 1.05
PDLIM7-213ENST00000505074 EAPPQ56P03 285 aaPredicted RBP21.59■■□□□ 1.05
PDLIM7-213ENST00000505074 PRPF40BQ6NWY9 871 aaKnown RBP21.59■■□□□ 1.05
PDLIM7-213ENST00000505074 CLEC11AQ9Y240 323 aa21.59■■□□□ 1.05
PDLIM7-213ENST00000505074 DIAPH1O60610 1272 aaKnown RBP21.58■■□□□ 1.05
PDLIM7-213ENST00000505074 HSPA8P11142 646 aaKnown RBP21.58■■□□□ 1.05
PDLIM7-213ENST00000505074 DEFB115Q30KQ5 88 aa21.58■■□□□ 1.05
PDLIM7-213ENST00000505074 PER1O15534 1290 aaPredicted RBP21.57■■□□□ 1.04
PDLIM7-213ENST00000505074 MAP2K1Q02750 393 aaPredicted RBP21.57■■□□□ 1.04
PDLIM7-213ENST00000505074 TTC5Q8N0Z6 440 aa21.57■■□□□ 1.04
PDLIM7-213ENST00000505074 CNBD1Q8NA66 436 aa21.57■■□□□ 1.04
PDLIM7-213ENST00000505074 MASTLQ96GX5 879 aa21.57■■□□□ 1.04
PDLIM7-213ENST00000505074 RASSF10A6NK89 507 aa21.56■■□□□ 1.04
PDLIM7-213ENST00000505074 SRGNP10124 158 aa21.56■■□□□ 1.04
PDLIM7-213ENST00000505074 ST5P78524 1137 aa21.56■■□□□ 1.04
PDLIM7-213ENST00000505074 SETDB2Q96T68 719 aa21.56■■□□□ 1.04
PDLIM7-213ENST00000505074 HACL1Q9UJ83 578 aa21.56■■□□□ 1.04
PDLIM7-213ENST00000505074 TBC1D2BQ9UPU7 963 aa21.56■■□□□ 1.04
PDLIM7-213ENST00000505074 ZNF330Q9Y3S2 320 aaPredicted RBP21.56■■□□□ 1.04
PDLIM7-213ENST00000505074 ADAMTSL1Q8N6G6 1762 aa21.56■■□□□ 1.04
PDLIM7-213ENST00000505074 NPM2Q86SE8 214 aaKnown RBP21.55■■□□□ 1.04
PDLIM7-213ENST00000505074 PCDH10Q9P2E7 1040 aa21.55■■□□□ 1.04
PDLIM7-213ENST00000505074 U2SURPO15042 1029 aaKnown RBP21.54■■□□□ 1.04
PDLIM7-213ENST00000505074 MLLT1Q03111 559 aaPredicted RBP21.54■■□□□ 1.04
PDLIM7-213ENST00000505074 CCDC93Q567U6 631 aa21.54■■□□□ 1.04
PDLIM7-213ENST00000505074 PNMA8AQ86V59 439 aaPredicted RBP21.54■■□□□ 1.04
PDLIM7-213ENST00000505074 TEX13AQ9BXU3 409 aaPredicted RBP21.54■■□□□ 1.04
PDLIM7-213ENST00000505074 WDR33Q9C0J8 1336 aaKnown RBP21.54■■□□□ 1.04
PDLIM7-213ENST00000505074 EPHX2P34913 555 aa21.53■■□□□ 1.04
PDLIM7-213ENST00000505074 IL6STP40189 918 aaPredicted RBP21.52■■□□□ 1.04
PDLIM7-213ENST00000505074 CNTROBQ8N137 903 aa21.52■■□□□ 1.04
PDLIM7-213ENST00000505074 ABT1Q9ULW3 272 aaKnown RBP21.52■■□□□ 1.04
PDLIM7-213ENST00000505074 CCDC85CA6NKD9 419 aa21.51■■□□□ 1.03
PDLIM7-213ENST00000505074 FKBP4Q02790 459 aaKnown RBP eCLIP21.51■■□□□ 1.03
PDLIM7-213ENST00000505074 MTHFSDQ2M296 383 aaKnown RBP21.51■■□□□ 1.03
PDLIM7-213ENST00000505074 ZNF541Q9H0D2 1346 aa21.51■■□□□ 1.03
PDLIM7-213ENST00000505074 BCORQ6W2J9 1755 aa21.51■■□□□ 1.03
PDLIM7-213ENST00000505074 MAP1SQ66K74 1059 aaPredicted RBP21.5■■□□□ 1.03
PDLIM7-213ENST00000505074 C7orf43Q8WVR3 580 aa21.5■■□□□ 1.03
PDLIM7-213ENST00000505074 HEG1Q9ULI3 1381 aa21.49■■□□□ 1.03
PDLIM7-213ENST00000505074 ZNF496Q96IT1 587 aaPredicted RBP21.49■■□□□ 1.03
PDLIM7-213ENST00000505074 BEGAINQ9BUH8 593 aa21.49■■□□□ 1.03
PDLIM7-213ENST00000505074 ZNF277Q9NRM2 450 aaPredicted RBP21.49■■□□□ 1.03
PDLIM7-213ENST00000505074 NPC1L1Q9UHC9 1359 aa21.48■■□□□ 1.03
PDLIM7-213ENST00000505074 COL3A1P02461 1466 aaPredicted RBP21.48■■□□□ 1.03
PDLIM7-213ENST00000505074 CAMTA2O94983 1202 aa21.48■■□□□ 1.03
PDLIM7-213ENST00000505074 RGS19P49795 217 aa21.48■■□□□ 1.03
PDLIM7-213ENST00000505074 RNF123Q5XPI4 1314 aa21.48■■□□□ 1.03
PDLIM7-213ENST00000505074 NPR1P16066 1061 aa21.47■■□□□ 1.03
PDLIM7-213ENST00000505074 ZNF790Q6PG37 636 aa21.47■■□□□ 1.03
PDLIM7-213ENST00000505074 THSD7BQ9C0I4 1608 aa21.47■■□□□ 1.03
PDLIM7-213ENST00000505074 TEFQ10587 303 aa21.46■■□□□ 1.03
PDLIM7-213ENST00000505074 RTKN2Q8IZC4 609 aa21.46■■□□□ 1.03
PDLIM7-213ENST00000505074 SIPA1L3O60292 1781 aaPredicted RBP21.46■■□□□ 1.03
PDLIM7-213ENST00000505074 A1BGP04217 495 aa21.45■■□□□ 1.02
PDLIM7-213ENST00000505074 ECE1P42892 770 aa21.45■■□□□ 1.02
PDLIM7-213ENST00000505074 PAXIP1Q6ZW49 1069 aaPredicted RBP21.45■■□□□ 1.02
PDLIM7-213ENST00000505074 NBPF5PQ86XG9 351 aaPredicted RBP21.45■■□□□ 1.02
PDLIM7-213ENST00000505074 DZIP3Q86Y13 1208 aaKnown RBP21.45■■□□□ 1.02
PDLIM7-213ENST00000505074 GPC2Q8N158 579 aa21.45■■□□□ 1.02
PDLIM7-213ENST00000505074 CFAP53Q96M91 514 aa21.45■■□□□ 1.02
PDLIM7-213ENST00000505074 DDX21Q9NR30 783 aaKnown RBP eCLIP21.45■■□□□ 1.02
PDLIM7-213ENST00000505074 TRPM7Q96QT4 1865 aa21.45■■□□□ 1.02
PDLIM7-213ENST00000505074 FZD9O00144 591 aa21.44■■□□□ 1.02
PDLIM7-213ENST00000505074 IARSP41252 1262 aaKnown RBP21.44■■□□□ 1.02
PDLIM7-213ENST00000505074 GAS2L2Q8NHY3 880 aa21.43■■□□□ 1.02
PDLIM7-213ENST00000505074 CAPNS2Q96L46 248 aa21.43■■□□□ 1.02
PDLIM7-213ENST00000505074 FMNL2Q96PY5 1086 aa21.43■■□□□ 1.02
PDLIM7-213ENST00000505074 GRM1Q13255 1194 aa21.41■■□□□ 1.02
PDLIM7-213ENST00000505074 CLEC4GQ6UXB4 293 aa21.41■■□□□ 1.02
PDLIM7-213ENST00000505074 SYNE4Q8N205 404 aa21.41■■□□□ 1.02
PDLIM7-213ENST00000505074 JDP2Q8WYK2 163 aa21.41■■□□□ 1.02
PDLIM7-213ENST00000505074 GPR101Q96P66 508 aaPredicted RBP21.41■■□□□ 1.02
PDLIM7-213ENST00000505074 ZNF652Q9Y2D9 606 aa21.41■■□□□ 1.02
PDLIM7-213ENST00000505074 KLRG2A4D1S0 409 aaPredicted RBP21.4■■□□□ 1.02
PDLIM7-213ENST00000505074 GNAT3A8MTJ3 354 aa21.4■■□□□ 1.02
PDLIM7-213ENST00000505074 LMOD1P29536 600 aaPredicted RBP21.4■■□□□ 1.02
PDLIM7-213ENST00000505074 OLFM4Q6UX06 510 aa21.4■■□□□ 1.02
PDLIM7-213ENST00000505074 TPTE2Q6XPS3 522 aa21.4■■□□□ 1.02
PDLIM7-213ENST00000505074 ALDH1B1P30837 517 aa21.39■■□□□ 1.01
PDLIM7-213ENST00000505074 CYP4F22Q6NT55 531 aa21.39■■□□□ 1.01
PDLIM7-213ENST00000505074 IL17REQ8NFR9 667 aa21.39■■□□□ 1.01
PDLIM7-213ENST00000505074 CFAP44Q96MT7 982 aa21.39■■□□□ 1.01
PDLIM7-213ENST00000505074 EIF6P56537 245 aaKnown RBP21.38■■□□□ 1.01
PDLIM7-213ENST00000505074 NUDCQ9Y266 331 aa21.38■■□□□ 1.01
PDLIM7-213ENST00000505074 GJA3Q9Y6H8 435 aa21.38■■□□□ 1.01
PDLIM7-213ENST00000505074 PRKAR2BP31323 418 aa21.37■■□□□ 1.01
PDLIM7-213ENST00000505074 LTBP1Q14766 1721 aa21.36■■□□□ 1.01
PDLIM7-213ENST00000505074 MAP2K2P36507 400 aa21.36■■□□□ 1.01
PDLIM7-213ENST00000505074 PSMD1Q99460 953 aa21.36■■□□□ 1.01
PDLIM7-213ENST00000505074 U2AF1L5P0DN76 240 aaPredicted RBP21.35■■□□□ 1.01
PDLIM7-213ENST00000505074 U2AF1Q01081 240 aaKnown RBP eCLIP21.35■■□□□ 1.014e-6■■□□□ 12.1
PDLIM7-213ENST00000505074 FMR1Q06787 632 aaKnown RBP eCLIP21.35■■□□□ 1.01
PDLIM7-213ENST00000505074 TSKSQ9UJT2 592 aa21.35■■□□□ 1.01
PDLIM7-213ENST00000505074 NIP7Q9Y221 180 aaKnown RBP eCLIP21.35■■□□□ 1.01
PDLIM7-213ENST00000505074 CASP8AP2Q9UKL3 1982 aa21.35■■□□□ 1.01
PDLIM7-213ENST00000505074 PPP2R1AP30153 589 aa21.34■■□□□ 1.01
PDLIM7-213ENST00000505074 PIP4K2AP48426 406 aaPredicted RBP21.34■■□□□ 1.01
PDLIM7-213ENST00000505074 USP16Q9Y5T5 823 aa21.34■■□□□ 1.01
PDLIM7-213ENST00000505074 TLL2Q9Y6L7 1015 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms