RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 QTRT2Q9H974 415 aaKnown RBP7.04□□□□□ -1.28
CDH9-203ENST00000505045 RALGAPBQ86X10 1494 aa7.03□□□□□ -1.28
CDH9-203ENST00000505045 MS4A1P11836 297 aa7.03□□□□□ -1.28
CDH9-203ENST00000505045 SYMPKQ92797 1274 aaKnown RBP7.03□□□□□ -1.28
CDH9-203ENST00000505045 EIF3AQ14152 1382 aaKnown RBP7.02□□□□□ -1.29
CDH9-203ENST00000505045 FDX1P10109 184 aa7.02□□□□□ -1.29
CDH9-203ENST00000505045 RBM6P78332 1123 aaKnown RBP7.02□□□□□ -1.29
CDH9-203ENST00000505045 CTC1Q2NKJ3 1217 aa7.02□□□□□ -1.29
CDH9-203ENST00000505045 COL14A1Q05707 1796 aaKnown RBP7.02□□□□□ -1.29
CDH9-203ENST00000505045 ARHGEF10O15013 1369 aa7.02□□□□□ -1.29
CDH9-203ENST00000505045 PIK3C2AO00443 1686 aa7.01□□□□□ -1.29
CDH9-203ENST00000505045 MOXD2PA6NHM9 499 aa7.01□□□□□ -1.29
CDH9-203ENST00000505045 NEUROD1Q13562 356 aa7.01□□□□□ -1.29
CDH9-203ENST00000505045 TMEM151AQ8N4L1 468 aa7.01□□□□□ -1.29
CDH9-203ENST00000505045 BEGAINQ9BUH8 593 aa7.01□□□□□ -1.29
CDH9-203ENST00000505045 AKAP12Q02952 1782 aa7.01□□□□□ -1.29
CDH9-203ENST00000505045 POLR3AO14802 1390 aaPredicted RBP7.01□□□□□ -1.29
CDH9-203ENST00000505045 JUNDP17535 347 aa7.01□□□□□ -1.29
CDH9-203ENST00000505045 NDUFV2P19404 249 aa7.01□□□□□ -1.29
CDH9-203ENST00000505045 PSME1Q06323 249 aa7.01□□□□□ -1.29
CDH9-203ENST00000505045 PDE4DQ08499 809 aa7.01□□□□□ -1.29
CDH9-203ENST00000505045 NBPF8Q3BBV2 869 aa7.01□□□□□ -1.29
CDH9-203ENST00000505045 RETREG3Q86VR2 466 aa7.01□□□□□ -1.29
CDH9-203ENST00000505045 NUDT16Q96DE0 195 aaKnown RBP7.01□□□□□ -1.29
CDH9-203ENST00000505045 CDK19Q9BWU1 502 aa7.01□□□□□ -1.29
CDH9-203ENST00000505045 SLC24A3Q9HC58 644 aa7.01□□□□□ -1.29
CDH9-203ENST00000505045 TRPC5Q9UL62 973 aaPredicted RBP7.01□□□□□ -1.29
CDH9-203ENST00000505045 LMO7Q8WWI1 1683 aa7□□□□□ -1.29
CDH9-203ENST00000505045 PPIP5K1Q6PFW1 1433 aa7□□□□□ -1.29
CDH9-203ENST00000505045 SLC24A1O60721 1099 aa7□□□□□ -1.29
CDH9-203ENST00000505045 GJA5P36382 358 aa7□□□□□ -1.29
CDH9-203ENST00000505045 CENPJQ9HC77 1338 aaPredicted RBP7□□□□□ -1.29
CDH9-203ENST00000505045 GPRASP1Q5JY77 1395 aa7□□□□□ -1.29
CDH9-203ENST00000505045 THSD7AQ9UPZ6 1657 aa6.99□□□□□ -1.29
CDH9-203ENST00000505045 MON2Q7Z3U7 1717 aa6.99□□□□□ -1.29
CDH9-203ENST00000505045 ROCK2O75116 1388 aaKnown RBP6.99□□□□□ -1.29
CDH9-203ENST00000505045 FAM83GA6ND36 823 aa6.99□□□□□ -1.29
CDH9-203ENST00000505045 CD2BP2O95400 341 aaKnown RBP6.99□□□□□ -1.29
CDH9-203ENST00000505045 SMCPP49901 116 aaPredicted RBP6.99□□□□□ -1.29
CDH9-203ENST00000505045 NUTM2GQ5VZR2 741 aa6.99□□□□□ -1.29
CDH9-203ENST00000505045 UNC5CLQ8IV45 518 aa6.99□□□□□ -1.29
CDH9-203ENST00000505045 NGDNQ8NEJ9 315 aaKnown RBP6.99□□□□□ -1.29
CDH9-203ENST00000505045 GJD4Q96KN9 370 aaPredicted RBP6.99□□□□□ -1.29
CDH9-203ENST00000505045 TBC1D2Q9BYX2 928 aa6.99□□□□□ -1.29
CDH9-203ENST00000505045 ACEP12821 1306 aa6.98□□□□□ -1.29
CDH9-203ENST00000505045 TOR4AQ9NXH8 423 aa6.98□□□□□ -1.29
CDH9-203ENST00000505045 ATAD2Q6PL18 1390 aa6.98□□□□□ -1.29
CDH9-203ENST00000505045 KIAA0232Q92628 1395 aa6.98□□□□□ -1.29
CDH9-203ENST00000505045 USP6P35125 1406 aa6.98□□□□□ -1.29
CDH9-203ENST00000505045 SPTLC1O15269 473 aa6.97□□□□□ -1.29
CDH9-203ENST00000505045 GDF11O95390 407 aa6.97□□□□□ -1.29
CDH9-203ENST00000505045 LCE3BQ5TA77 95 aa6.97□□□□□ -1.29
CDH9-203ENST00000505045 RSBN1LQ6PCB5 846 aaPredicted RBP6.97□□□□□ -1.29
CDH9-203ENST00000505045 TRIM47Q96LD4 638 aa6.97□□□□□ -1.29
CDH9-203ENST00000505045 RGPD5Q99666 1765 aa6.97□□□□□ -1.29
CDH9-203ENST00000505045 SLIT3O75094 1523 aa6.97□□□□□ -1.29
CDH9-203ENST00000505045 CAMTA1Q9Y6Y1 1673 aa6.97□□□□□ -1.29
CDH9-203ENST00000505045 TNS1Q9HBL0 1735 aaKnown RBP6.97□□□□□ -1.29
CDH9-203ENST00000505045 SRPK2P78362 688 aaKnown RBP6.97□□□□□ -1.29
CDH9-203ENST00000505045 TRIM32Q13049 653 aa6.97□□□□□ -1.29
CDH9-203ENST00000505045 DIXDC1Q155Q3 683 aa6.97□□□□□ -1.29
CDH9-203ENST00000505045 IRF7Q92985 503 aa6.97□□□□□ -1.29
CDH9-203ENST00000505045 BTG4Q9NY30 223 aa6.97□□□□□ -1.29
CDH9-203ENST00000505045 WNK3Q9BYP7 1800 aa6.96□□□□□ -1.29
CDH9-203ENST00000505045 SSH2Q76I76 1423 aa6.96□□□□□ -1.29
CDH9-203ENST00000505045 COL18A1P39060 1754 aa6.96□□□□□ -1.3
CDH9-203ENST00000505045 PLEKHG3A1L390 1219 aa6.96□□□□□ -1.3
CDH9-203ENST00000505045 ZBTB24O43167 697 aaPredicted RBP6.96□□□□□ -1.3
CDH9-203ENST00000505045 CHRNA2Q15822 529 aa6.96□□□□□ -1.3
CDH9-203ENST00000505045 VPS72Q15906 364 aa6.96□□□□□ -1.3
CDH9-203ENST00000505045 USP19O94966 1318 aa6.96□□□□□ -1.3
CDH9-203ENST00000505045 CD163L1Q9NR16 1453 aa6.96□□□□□ -1.3
CDH9-203ENST00000505045 C6orf229H3BNL8 230 aa6.95□□□□□ -1.3
CDH9-203ENST00000505045 TRIM26Q12899 539 aaPredicted RBP6.95□□□□□ -1.3
CDH9-203ENST00000505045 FOXC1Q12948 553 aa6.95□□□□□ -1.3
CDH9-203ENST00000505045 PCDHB15Q9Y5E8 787 aa6.95□□□□□ -1.3
CDH9-203ENST00000505045 TONSLQ96HA7 1378 aa6.95□□□□□ -1.3
CDH9-203ENST00000505045 USP54Q70EL1 1684 aa6.95□□□□□ -1.3
CDH9-203ENST00000505045 WNT7AO00755 349 aa6.94□□□□□ -1.3
CDH9-203ENST00000505045 ZC3H6P61129 1189 aaKnown RBP6.94□□□□□ -1.3
CDH9-203ENST00000505045 DESI1Q6ICB0 168 aa6.94□□□□□ -1.3
CDH9-203ENST00000505045 PTCRAQ6ISU1 281 aaPredicted RBP6.94□□□□□ -1.3
CDH9-203ENST00000505045 ATP13A2Q9NQ11 1180 aa6.94□□□□□ -1.3
CDH9-203ENST00000505045 PRDM11Q9NQV5 511 aa6.94□□□□□ -1.3
CDH9-203ENST00000505045 CABP1Q9NZU7 370 aa6.94□□□□□ -1.3
CDH9-203ENST00000505045 LTN1O94822 1766 aa6.94□□□□□ -1.3
CDH9-203ENST00000505045 NFAT5O94916 1531 aa6.94□□□□□ -1.3
CDH9-203ENST00000505045 COL5A2P05997 1499 aaPredicted RBP6.94□□□□□ -1.3
CDH9-203ENST00000505045 SBNO2Q9Y2G9 1366 aa6.94□□□□□ -1.3
CDH9-203ENST00000505045 SPDYE5A6NIY4 337 aa6.94□□□□□ -1.3
CDH9-203ENST00000505045 SKOR1P84550 965 aa6.94□□□□□ -1.3
CDH9-203ENST00000505045 MTMR2Q13614 643 aa6.94□□□□□ -1.3
CDH9-203ENST00000505045 TUSC1Q2TAM9 212 aa6.94□□□□□ -1.3
CDH9-203ENST00000505045 SEPT12Q8IYM1 358 aa6.94□□□□□ -1.3
CDH9-203ENST00000505045 NUDT12Q9BQG2 462 aa6.94□□□□□ -1.3
CDH9-203ENST00000505045 SENP2Q9HC62 589 aa6.94□□□□□ -1.3
CDH9-203ENST00000505045 CCDC9Q9Y3X0 531 aaKnown RBP6.94□□□□□ -1.3
CDH9-203ENST00000505045 LRRC37A3O60309 1634 aa6.93□□□□□ -1.3
CDH9-203ENST00000505045 CPSF1Q10570 1443 aaKnown RBP6.93□□□□□ -1.3
CDH9-203ENST00000505045 SPATA31A5Q5VU36 1347 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms