RNA–Protein interactions for RNA: ENST00000505016.2

MATR3-234, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-234ENST00000505016 U2AF1Q01081 240 aaKnown RBP eCLIP16.35■□□□□ 0.21
MATR3-234ENST00000505016 NMRK2Q9NPI5 230 aa16.35■□□□□ 0.21
MATR3-234ENST00000505016 CARMIL3Q8ND23 1372 aa16.35■□□□□ 0.21
MATR3-234ENST00000505016 SCN7AQ01118 1682 aa16.34■□□□□ 0.21
MATR3-234ENST00000505016 A1BGP04217 495 aa16.34■□□□□ 0.21
MATR3-234ENST00000505016 TBC1D9BQ66K14 1250 aa16.34■□□□□ 0.21
MATR3-234ENST00000505016 TSPYL2Q9H2G4 693 aaPredicted RBP16.34■□□□□ 0.21
MATR3-234ENST00000505016 TBC1D2BQ9UPU7 963 aa16.34■□□□□ 0.21
MATR3-234ENST00000505016 ZNF330Q9Y3S2 320 aaPredicted RBP16.34■□□□□ 0.21
MATR3-234ENST00000505016 DLEC1Q9Y238 1755 aa16.33■□□□□ 0.21
MATR3-234ENST00000505016 IL6STP40189 918 aaPredicted RBP16.33■□□□□ 0.2
MATR3-234ENST00000505016 RNF181Q9P0P0 153 aa16.33■□□□□ 0.2
MATR3-234ENST00000505016 SBF1O95248 1867 aa16.32■□□□□ 0.2
MATR3-234ENST00000505016 MCM10Q7L590 875 aa16.32■□□□□ 0.2
MATR3-234ENST00000505016 C2CD5Q86YS7 1000 aa16.32■□□□□ 0.2
MATR3-234ENST00000505016 PRAMEF22A3QJZ6 481 aa16.31■□□□□ 0.2
MATR3-234ENST00000505016 TOMM70O94826 608 aa16.31■□□□□ 0.2
MATR3-234ENST00000505016 RASSF7Q02833 373 aa16.31■□□□□ 0.2
MATR3-234ENST00000505016 DCTN1Q14203 1278 aa16.31■□□□□ 0.2
MATR3-234ENST00000505016 TTLL6Q8N841 843 aa16.31■□□□□ 0.2
MATR3-234ENST00000505016 USP16Q9Y5T5 823 aa16.31■□□□□ 0.2
MATR3-234ENST00000505016 ANKRD31Q8N7Z5 1873 aa16.31■□□□□ 0.2
MATR3-234ENST00000505016 H0YIN7 160 aa16.3■□□□□ 0.2
MATR3-234ENST00000505016 CAMTA2O94983 1202 aa16.3■□□□□ 0.2
MATR3-234ENST00000505016 PIP4K2AP48426 406 aaPredicted RBP16.3■□□□□ 0.2
MATR3-234ENST00000505016 IFNLR1Q8IU57 520 aaPredicted RBP16.3■□□□□ 0.2
MATR3-234ENST00000505016 CCDC24Q8N4L8 307 aa16.3■□□□□ 0.2
MATR3-234ENST00000505016 RTF1Q92541 710 aaKnown RBP16.3■□□□□ 0.2
MATR3-234ENST00000505016 PHF12Q96QT6 1004 aa16.3■□□□□ 0.2
MATR3-234ENST00000505016 PRELPP51888 382 aa16.29■□□□□ 0.2
MATR3-234ENST00000505016 BCORQ6W2J9 1755 aa16.28■□□□□ 0.2
MATR3-234ENST00000505016 PRR5LQ6MZQ0 368 aa16.28■□□□□ 0.2
MATR3-234ENST00000505016 KDM2BQ8NHM5 1336 aa16.27■□□□□ 0.2
MATR3-234ENST00000505016 HTATSF1O43719 755 aaKnown RBP16.27■□□□□ 0.2
MATR3-234ENST00000505016 DZIP3Q86Y13 1208 aaKnown RBP16.27■□□□□ 0.2
MATR3-234ENST00000505016 BRIP1Q9BX63 1249 aa16.27■□□□□ 0.2
MATR3-234ENST00000505016 COL11A2P13942 1736 aaPredicted RBP16.27■□□□□ 0.19
MATR3-234ENST00000505016 SNRPA1P09661 255 aaKnown RBP16.26■□□□□ 0.19
MATR3-234ENST00000505016 LMNB1P20700 586 aa16.26■□□□□ 0.19
MATR3-234ENST00000505016 PDE6BP35913 854 aa16.26■□□□□ 0.19
MATR3-234ENST00000505016 NPM2Q86SE8 214 aaKnown RBP16.26■□□□□ 0.19
MATR3-234ENST00000505016 ZNF622Q969S3 477 aaKnown RBP eCLIP16.26■□□□□ 0.19
MATR3-234ENST00000505016 SETDB2Q96T68 719 aa16.26■□□□□ 0.19
MATR3-234ENST00000505016 RRAGCQ9HB90 399 aa16.26■□□□□ 0.19
MATR3-234ENST00000505016 NFKBIEO00221 500 aa16.25■□□□□ 0.19
MATR3-234ENST00000505016 APLP1P51693 650 aa16.25■□□□□ 0.19
MATR3-234ENST00000505016 RBM46Q8TBY0 533 aaKnown RBP16.25■□□□□ 0.19
MATR3-234ENST00000505016 MIS18AQ9NYP9 233 aa16.25■□□□□ 0.19
MATR3-234ENST00000505016 TNRC6CQ9HCJ0 1690 aaKnown RBP16.24■□□□□ 0.19
MATR3-234ENST00000505016 NBPF26B4DH59 902 aa16.24■□□□□ 0.19
MATR3-234ENST00000505016 TAF7Q15545 349 aaPredicted RBP16.24■□□□□ 0.19
MATR3-234ENST00000505016 NBPF10Q6P3W6 841 aaKnown RBP16.24■□□□□ 0.19
MATR3-234ENST00000505016 C16orf71Q8IYS4 520 aaPredicted RBP16.24■□□□□ 0.19
MATR3-234ENST00000505016 NBPF15Q8N660 670 aa16.24■□□□□ 0.19
MATR3-234ENST00000505016 CNBD1Q8NA66 436 aa16.24■□□□□ 0.19
MATR3-234ENST00000505016 PDZRN3Q9UPQ7 1066 aa16.24■□□□□ 0.19
MATR3-234ENST00000505016 ZC3H4Q9UPT8 1303 aaKnown RBP16.23■□□□□ 0.19
MATR3-234ENST00000505016 TIAM2Q8IVF5 1701 aa16.23■□□□□ 0.19
MATR3-234ENST00000505016 C21orf2O43822 256 aa16.23■□□□□ 0.19
MATR3-234ENST00000505016 PLEKHF1Q96S99 279 aa16.23■□□□□ 0.19
MATR3-234ENST00000505016 DLG5Q8TDM6 1919 aa16.23■□□□□ 0.19
MATR3-234ENST00000505016 CCDC88AQ3V6T2 1871 aa16.22■□□□□ 0.19
MATR3-234ENST00000505016 NPHP1O15259 732 aa16.22■□□□□ 0.19
MATR3-234ENST00000505016 ST5P78524 1137 aa16.22■□□□□ 0.19
MATR3-234ENST00000505016 DNAJC5GQ8N7S2 189 aa16.22■□□□□ 0.19
MATR3-234ENST00000505016 GLTPD2A6NH11 291 aa16.21■□□□□ 0.19
MATR3-234ENST00000505016 CLCN6P51797 869 aa16.21■□□□□ 0.19
MATR3-234ENST00000505016 CLEC4GQ6UXB4 293 aa16.21■□□□□ 0.19
MATR3-234ENST00000505016 WDR90Q96KV7 1748 aa16.2■□□□□ 0.18
MATR3-234ENST00000505016 SLX4Q8IY92 1834 aa16.2■□□□□ 0.18
MATR3-234ENST00000505016 SRGNP10124 158 aa16.2■□□□□ 0.18
MATR3-234ENST00000505016 FSTL1Q12841 308 aa16.2■□□□□ 0.18
MATR3-234ENST00000505016 NBPF5PQ86XG9 351 aaPredicted RBP16.2■□□□□ 0.18
MATR3-234ENST00000505016 ZNF652Q9Y2D9 606 aa16.2■□□□□ 0.18
MATR3-234ENST00000505016 LAMB4A4D0S4 1761 aa16.2■□□□□ 0.18
MATR3-234ENST00000505016 KDM3BQ7LBC6 1761 aa16.2■□□□□ 0.18
MATR3-234ENST00000505016 FER1L6Q2WGJ9 1857 aa16.2■□□□□ 0.18
MATR3-234ENST00000505016 CACNA1SQ13698 1873 aa16.19■□□□□ 0.18
MATR3-234ENST00000505016 GALR2O43603 387 aaPredicted RBP16.19■□□□□ 0.18
MATR3-234ENST00000505016 NEFMP07197 916 aa16.19■□□□□ 0.18
MATR3-234ENST00000505016 NFE2L2Q16236 605 aa16.19■□□□□ 0.18
MATR3-234ENST00000505016 STYK1Q6J9G0 422 aa16.19■□□□□ 0.18
MATR3-234ENST00000505016 THUMPD2Q9BTF0 503 aaKnown RBP16.19■□□□□ 0.18
MATR3-234ENST00000505016 HTRA3P83110 453 aa16.18■□□□□ 0.18
MATR3-234ENST00000505016 HLFQ16534 295 aa16.18■□□□□ 0.18
MATR3-234ENST00000505016 PRPF40BQ6NWY9 871 aaKnown RBP16.18■□□□□ 0.18
MATR3-234ENST00000505016 CNKSR1Q969H4 720 aa16.18■□□□□ 0.18
MATR3-234ENST00000505016 MASTLQ96GX5 879 aa16.18■□□□□ 0.18
MATR3-234ENST00000505016 NIP7Q9Y221 180 aaKnown RBP eCLIP16.18■□□□□ 0.181e-323■■□□□ 14.4
MATR3-234ENST00000505016 ARFGEF2Q9Y6D5 1785 aa16.18■□□□□ 0.18
MATR3-234ENST00000505016 VEGFAP15692 232 aaPredicted RBP16.17■□□□□ 0.18
MATR3-234ENST00000505016 EIF4A1P60842 406 aaKnown RBP16.17■□□□□ 0.18
MATR3-234ENST00000505016 PNISRQ8TF01 805 aaKnown RBP16.17■□□□□ 0.18
MATR3-234ENST00000505016 DICER1Q9UPY3 1922 aaKnown RBP16.16■□□□□ 0.18
MATR3-234ENST00000505016 FAM177BA6PVY3 158 aa16.16■□□□□ 0.18
MATR3-234ENST00000505016 RGL2O15211 777 aa16.16■□□□□ 0.18
MATR3-234ENST00000505016 ERFEQ4G0M1 354 aa16.16■□□□□ 0.18
MATR3-234ENST00000505016 SMC1BQ8NDV3 1235 aa16.16■□□□□ 0.18
MATR3-234ENST00000505016 TAOK3Q9H2K8 898 aa16.16■□□□□ 0.18
MATR3-234ENST00000505016 LTBP3Q9NS15 1303 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms