RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 OXCT2Q9BYC2 517 aaPredicted RBP9.7□□□□□ -0.86
UBE2D3-218ENST00000505009 STRN4Q9NRL3 753 aa9.7□□□□□ -0.86
UBE2D3-218ENST00000505009 NOVA2Q9UNW9 492 aaKnown RBP9.7□□□□□ -0.86
UBE2D3-218ENST00000505009 NSFL1CQ9UNZ2 370 aaKnown RBP9.7□□□□□ -0.86
UBE2D3-218ENST00000505009 BCRP11274 1271 aa9.69□□□□□ -0.86
UBE2D3-218ENST00000505009 MAP3K10Q02779 954 aa9.69□□□□□ -0.86
UBE2D3-218ENST00000505009 C1orf229Q6ZS94 237 aaPredicted RBP9.69□□□□□ -0.86
UBE2D3-218ENST00000505009 NGLY1Q96IV0 654 aa9.69□□□□□ -0.86
UBE2D3-218ENST00000505009 HSH2DQ96JZ2 352 aa9.69□□□□□ -0.86
UBE2D3-218ENST00000505009 ZMIZ1Q9ULJ6 1067 aa9.69□□□□□ -0.86
UBE2D3-218ENST00000505009 CHMP3Q9Y3E7 222 aa9.69□□□□□ -0.86
UBE2D3-218ENST00000505009 GRIN2CQ14957 1233 aa9.68□□□□□ -0.86
UBE2D3-218ENST00000505009 ZNF280CQ8ND82 737 aa9.68□□□□□ -0.86
UBE2D3-218ENST00000505009 FAM200AQ8TCP9 573 aa9.68□□□□□ -0.86
UBE2D3-218ENST00000505009 FAM157BP0CG42 384 aa9.67□□□□□ -0.86
UBE2D3-218ENST00000505009 SAMD5Q5TGI4 173 aa9.67□□□□□ -0.86
UBE2D3-218ENST00000505009 C1orf53Q5VUE5 145 aa9.67□□□□□ -0.86
UBE2D3-218ENST00000505009 C14orf37Q86TY3 774 aa9.67□□□□□ -0.86
UBE2D3-218ENST00000505009 ALDH16A1Q8IZ83 802 aa9.67□□□□□ -0.86
UBE2D3-218ENST00000505009 STK32AQ8WU08 396 aa9.67□□□□□ -0.86
UBE2D3-218ENST00000505009 C1orf115Q9H7X2 142 aa9.67□□□□□ -0.86
UBE2D3-218ENST00000505009 SHISA8B8ZZ34 492 aa9.66□□□□□ -0.86
UBE2D3-218ENST00000505009 EFSO43281 561 aa9.66□□□□□ -0.86
UBE2D3-218ENST00000505009 IGFBP4P22692 258 aa9.66□□□□□ -0.86
UBE2D3-218ENST00000505009 STAG2Q8N3U4 1231 aa9.66□□□□□ -0.86
UBE2D3-218ENST00000505009 CCDC97Q96F63 343 aaPredicted RBP9.66□□□□□ -0.86
UBE2D3-218ENST00000505009 OIP5O43482 229 aa9.65□□□□□ -0.86
UBE2D3-218ENST00000505009 WEE1P30291 646 aa9.65□□□□□ -0.86
UBE2D3-218ENST00000505009 NEUROD4Q9HD90 331 aa9.65□□□□□ -0.86
UBE2D3-218ENST00000505009 GGA1Q9UJY5 639 aa9.65□□□□□ -0.86
UBE2D3-218ENST00000505009 GSK3AP49840 483 aa9.64□□□□□ -0.87
UBE2D3-218ENST00000505009 SFSWAPQ12872 951 aaKnown RBP9.64□□□□□ -0.87
UBE2D3-218ENST00000505009 SUSD3Q96L08 255 aa9.64□□□□□ -0.87
UBE2D3-218ENST00000505009 KLF15Q9UIH9 416 aa9.64□□□□□ -0.87
UBE2D3-218ENST00000505009 GPC6Q9Y625 555 aaPredicted RBP9.64□□□□□ -0.87
UBE2D3-218ENST00000505009 CCDC82Q8N4S0 544 aa9.63□□□□□ -0.87
UBE2D3-218ENST00000505009 GALNT6Q8NCL4 622 aa9.63□□□□□ -0.87
UBE2D3-218ENST00000505009 NEDD1Q8NHV4 660 aa9.63□□□□□ -0.87
UBE2D3-218ENST00000505009 PRIMPOLQ96LW4 560 aa9.63□□□□□ -0.87
UBE2D3-218ENST00000505009 SERPINA10Q9UK55 444 aa9.63□□□□□ -0.87
UBE2D3-218ENST00000505009 MARSP56192 900 aaKnown RBP9.62□□□□□ -0.87
UBE2D3-218ENST00000505009 FAM69CQ0P6D2 419 aa9.62□□□□□ -0.87
UBE2D3-218ENST00000505009 FAM182BQ5T319 152 aa9.62□□□□□ -0.87
UBE2D3-218ENST00000505009 ENAMQ9NRM1 1142 aa9.62□□□□□ -0.87
UBE2D3-218ENST00000505009 MARK1Q9P0L2 795 aa9.62□□□□□ -0.87
UBE2D3-218ENST00000505009 GDF2Q9UK05 429 aaPredicted RBP9.62□□□□□ -0.87
UBE2D3-218ENST00000505009 DNMT3AQ9Y6K1 912 aaPredicted RBP9.62□□□□□ -0.87
UBE2D3-218ENST00000505009 NEURL1BA8MQ27 555 aa9.61□□□□□ -0.87
UBE2D3-218ENST00000505009 ARAFP10398 606 aa9.61□□□□□ -0.87
UBE2D3-218ENST00000505009 PCBP4P57723 403 aaKnown RBP9.61□□□□□ -0.87
UBE2D3-218ENST00000505009 ELOAQ14241 798 aaKnown RBP9.61□□□□□ -0.87
UBE2D3-218ENST00000505009 GOLGA6L1Q8N7Z2 621 aa9.61□□□□□ -0.87
UBE2D3-218ENST00000505009 EDARADDQ8WWZ3 215 aa9.61□□□□□ -0.87
UBE2D3-218ENST00000505009 CEP63Q96MT8 703 aa9.61□□□□□ -0.87
UBE2D3-218ENST00000505009 CNTNAP5Q8WYK1 1306 aa9.6□□□□□ -0.87
UBE2D3-218ENST00000505009 ACIN1Q9UKV3 1341 aaKnown RBP9.6□□□□□ -0.87
UBE2D3-218ENST00000505009 PRMT3O60678 531 aa9.6□□□□□ -0.87
UBE2D3-218ENST00000505009 ATG7O95352 703 aa9.6□□□□□ -0.87
UBE2D3-218ENST00000505009 TYRO3Q06418 890 aa9.6□□□□□ -0.87
UBE2D3-218ENST00000505009 KCNMA1Q12791 1236 aa9.6□□□□□ -0.87
UBE2D3-218ENST00000505009 SLCO4C1Q6ZQN7 724 aa9.6□□□□□ -0.87
UBE2D3-218ENST00000505009 PBXIP1Q96AQ6 731 aa9.6□□□□□ -0.87
UBE2D3-218ENST00000505009 SLC30A3Q99726 388 aa9.6□□□□□ -0.87
UBE2D3-218ENST00000505009 QTRT2Q9H974 415 aaKnown RBP9.6□□□□□ -0.87
UBE2D3-218ENST00000505009 KLK14Q9P0G3 267 aa9.6□□□□□ -0.87
UBE2D3-218ENST00000505009 BCS1LQ9Y276 419 aa9.6□□□□□ -0.87
UBE2D3-218ENST00000505009 SNRPNP63162 240 aaKnown RBP9.59□□□□□ -0.87
UBE2D3-218ENST00000505009 FKBP5Q13451 457 aaPredicted RBP9.59□□□□□ -0.87
UBE2D3-218ENST00000505009 LAMC2Q13753 1193 aa9.59□□□□□ -0.87
UBE2D3-218ENST00000505009 RTN1Q16799 776 aa9.59□□□□□ -0.87
UBE2D3-218ENST00000505009 TMEM164Q5U3C3 297 aa9.59□□□□□ -0.87
UBE2D3-218ENST00000505009 FCHSD1Q86WN1 690 aa9.59□□□□□ -0.87
UBE2D3-218ENST00000505009 BRD7Q9NPI1 651 aa9.59□□□□□ -0.87
UBE2D3-218ENST00000505009 LRRC4BQ9NT99 713 aa9.59□□□□□ -0.87
UBE2D3-218ENST00000505009 ANKIB1Q9P2G1 1089 aa9.59□□□□□ -0.87
UBE2D3-218ENST00000505009 FOXO3O43524 673 aa9.58□□□□□ -0.88
UBE2D3-218ENST00000505009 IRS1P35568 1242 aa9.58□□□□□ -0.88
UBE2D3-218ENST00000505009 OCLNQ16625 522 aa9.58□□□□□ -0.88
UBE2D3-218ENST00000505009 BTLAQ7Z6A9 289 aa9.58□□□□□ -0.88
UBE2D3-218ENST00000505009 RAB44Q7Z6P3 723 aaPredicted RBP9.58□□□□□ -0.88
UBE2D3-218ENST00000505009 PRR12Q9ULL5 1215 aa9.58□□□□□ -0.88
UBE2D3-218ENST00000505009 EPXP11678 715 aa9.57□□□□□ -0.88
UBE2D3-218ENST00000505009 SWI5Q1ZZU3 235 aa9.57□□□□□ -0.88
UBE2D3-218ENST00000505009 ZNF468Q5VIY5 522 aaPredicted RBP9.57□□□□□ -0.88
UBE2D3-218ENST00000505009 ADH6P28332 368 aa9.56□□□□□ -0.88
UBE2D3-218ENST00000505009 RASSF7Q02833 373 aa9.56□□□□□ -0.88
UBE2D3-218ENST00000505009 ERICH6Q7L0X2 663 aa9.56□□□□□ -0.88
UBE2D3-218ENST00000505009 SCARF2Q96GP6 870 aaPredicted RBP9.56□□□□□ -0.88
UBE2D3-218ENST00000505009 SLAIN2Q9P270 581 aa9.56□□□□□ -0.88
UBE2D3-218ENST00000505009 HOXB4P17483 251 aaPredicted RBP9.55□□□□□ -0.88
UBE2D3-218ENST00000505009 DGKZQ13574 1117 aa9.55□□□□□ -0.88
UBE2D3-218ENST00000505009 CAPN12Q6ZSI9 719 aa9.55□□□□□ -0.88
UBE2D3-218ENST00000505009 SYT9Q86SS6 491 aa9.55□□□□□ -0.88
UBE2D3-218ENST00000505009 VTI1AQ96AJ9 217 aa9.55□□□□□ -0.88
UBE2D3-218ENST00000505009 DMGDHQ9UI17 866 aaKnown RBP9.55□□□□□ -0.88
UBE2D3-218ENST00000505009 LRFN2Q9ULH4 789 aa9.55□□□□□ -0.88
UBE2D3-218ENST00000505009 RNF225M0QZC1 329 aaPredicted RBP9.54□□□□□ -0.88
UBE2D3-218ENST00000505009 AMPD1P23109 780 aa9.54□□□□□ -0.88
UBE2D3-218ENST00000505009 SPEM2Q0P670 501 aa9.54□□□□□ -0.88
UBE2D3-218ENST00000505009 BTBD6Q96KE9 485 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms