RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 PLEKHF1Q96S99 279 aa17.56■□□□□ 0.4
DDX41-204ENST00000504807 ZNF219Q9P2Y4 722 aaPredicted RBP17.56■□□□□ 0.4
DDX41-204ENST00000504807 NUDCQ9Y266 331 aa17.56■□□□□ 0.4
DDX41-204ENST00000504807 BTBD11A6QL63 1104 aa17.55■□□□□ 0.4
DDX41-204ENST00000504807 LDHDQ86WU2 507 aa17.55■□□□□ 0.4
DDX41-204ENST00000504807 C2CD5Q86YS7 1000 aa17.55■□□□□ 0.4
DDX41-204ENST00000504807 USP16Q9Y5T5 823 aa17.55■□□□□ 0.4
DDX41-204ENST00000504807 DLG5Q8TDM6 1919 aa17.55■□□□□ 0.4
DDX41-204ENST00000504807 ZPR1O75312 459 aa17.54■□□□□ 0.4
DDX41-204ENST00000504807 DEFB115Q30KQ5 88 aa17.54■□□□□ 0.4
DDX41-204ENST00000504807 MIS18AQ9NYP9 233 aa17.54■□□□□ 0.4
DDX41-204ENST00000504807 WDR33Q9C0J8 1336 aaKnown RBP17.53■□□□□ 0.4
DDX41-204ENST00000504807 TBC1D9BQ66K14 1250 aa17.53■□□□□ 0.4
DDX41-204ENST00000504807 FMNL2Q96PY5 1086 aa17.53■□□□□ 0.4
DDX41-204ENST00000504807 THUMPD2Q9BTF0 503 aaKnown RBP17.53■□□□□ 0.4
DDX41-204ENST00000504807 TBC1D2BQ9UPU7 963 aa17.53■□□□□ 0.4
DDX41-204ENST00000504807 TNRC18O15417 2968 aaPredicted RBP17.53■□□□□ 0.4
DDX41-204ENST00000504807 RASSF10A6NK89 507 aa17.52■□□□□ 0.4
DDX41-204ENST00000504807 ITGBL1O95965 494 aaPredicted RBP17.52■□□□□ 0.4
DDX41-204ENST00000504807 EAPPQ56P03 285 aaPredicted RBP17.52■□□□□ 0.4
DDX41-204ENST00000504807 ANKRD31Q8N7Z5 1873 aa17.52■□□□□ 0.39
DDX41-204ENST00000504807 BCORQ6W2J9 1755 aa17.51■□□□□ 0.39
DDX41-204ENST00000504807 H0YIN7 160 aa17.51■□□□□ 0.39
DDX41-204ENST00000504807 C21orf2O43822 256 aa17.51■□□□□ 0.39
DDX41-204ENST00000504807 STARD3NLO95772 234 aa17.51■□□□□ 0.39
DDX41-204ENST00000504807 BICDL1Q6ZP65 573 aa17.51■□□□□ 0.39
DDX41-204ENST00000504807 CCDC24Q8N4L8 307 aa17.51■□□□□ 0.39
DDX41-204ENST00000504807 TAF1DQ9H5J8 278 aaPredicted RBP17.51■□□□□ 0.39
DDX41-204ENST00000504807 ABT1Q9ULW3 272 aaKnown RBP17.51■□□□□ 0.39
DDX41-204ENST00000504807 KDM3BQ7LBC6 1761 aa17.51■□□□□ 0.39
DDX41-204ENST00000504807 IQCA1LA6NCM1 817 aa17.5■□□□□ 0.39
DDX41-204ENST00000504807 NBPF26B4DH59 902 aa17.5■□□□□ 0.39
DDX41-204ENST00000504807 SERPINB2P05120 415 aa17.5■□□□□ 0.39
DDX41-204ENST00000504807 DDX10Q13206 875 aaKnown RBP17.5■□□□□ 0.39
DDX41-204ENST00000504807 NBPF10Q6P3W6 841 aaKnown RBP17.5■□□□□ 0.39
DDX41-204ENST00000504807 NBPF15Q8N660 670 aa17.5■□□□□ 0.39
DDX41-204ENST00000504807 BEGAINQ9BUH8 593 aa17.5■□□□□ 0.39
DDX41-204ENST00000504807 TSKSQ9UJT2 592 aa17.5■□□□□ 0.39
DDX41-204ENST00000504807 CLEC11AQ9Y240 323 aa17.5■□□□□ 0.39
DDX41-204ENST00000504807 ZNF330Q9Y3S2 320 aaPredicted RBP17.5■□□□□ 0.39
DDX41-204ENST00000504807 DLEC1Q9Y238 1755 aa17.5■□□□□ 0.39
DDX41-204ENST00000504807 COL11A2P13942 1736 aaPredicted RBP17.5■□□□□ 0.39
DDX41-204ENST00000504807 PDE4DIPQ5VU43 2346 aa17.49■□□□□ 0.39
DDX41-204ENST00000504807 CAMTA2O94983 1202 aa17.49■□□□□ 0.39
DDX41-204ENST00000504807 IL6STP40189 918 aaPredicted RBP17.49■□□□□ 0.39
DDX41-204ENST00000504807 ZNF622Q969S3 477 aaKnown RBP eCLIP17.49■□□□□ 0.395e-9■□□□□ 10.7
DDX41-204ENST00000504807 CCDC88AQ3V6T2 1871 aa17.49■□□□□ 0.39
DDX41-204ENST00000504807 GRM1Q13255 1194 aa17.48■□□□□ 0.39
DDX41-204ENST00000504807 MCOLN1Q9GZU1 580 aa17.48■□□□□ 0.39
DDX41-204ENST00000504807 HTATSF1O43719 755 aaKnown RBP17.47■□□□□ 0.39
DDX41-204ENST00000504807 PAXIP1Q6ZW49 1069 aaPredicted RBP17.47■□□□□ 0.39
DDX41-204ENST00000504807 RTF1Q92541 710 aaKnown RBP17.47■□□□□ 0.39
DDX41-204ENST00000504807 TEX13AQ9BXU3 409 aaPredicted RBP17.47■□□□□ 0.39
DDX41-204ENST00000504807 TAOK3Q9H2K8 898 aa17.47■□□□□ 0.39
DDX41-204ENST00000504807 LAMB4A4D0S4 1761 aa17.45■□□□□ 0.38
DDX41-204ENST00000504807 SNRPA1P09661 255 aaKnown RBP17.45■□□□□ 0.38
DDX41-204ENST00000504807 TAF7Q15545 349 aaPredicted RBP17.45■□□□□ 0.38
DDX41-204ENST00000504807 NFE2L2Q16236 605 aa17.45■□□□□ 0.38
DDX41-204ENST00000504807 MAP1SQ66K74 1059 aaPredicted RBP17.45■□□□□ 0.38
DDX41-204ENST00000504807 PRR5LQ6MZQ0 368 aa17.45■□□□□ 0.38
DDX41-204ENST00000504807 A0A087WZG4 1122 aa17.44■□□□□ 0.38
DDX41-204ENST00000504807 DZIP3Q86Y13 1208 aaKnown RBP17.44■□□□□ 0.38
DDX41-204ENST00000504807 CNTROBQ8N137 903 aa17.44■□□□□ 0.38
DDX41-204ENST00000504807 L3MBTL3Q96JM7 780 aaPredicted RBP17.44■□□□□ 0.38
DDX41-204ENST00000504807 CAPNS2Q96L46 248 aa17.43■□□□□ 0.38
DDX41-204ENST00000504807 CYP4F22Q6NT55 531 aa17.42■□□□□ 0.38
DDX41-204ENST00000504807 GPR101Q96P66 508 aaPredicted RBP17.42■□□□□ 0.38
DDX41-204ENST00000504807 LTBP3Q9NS15 1303 aa17.42■□□□□ 0.38
DDX41-204ENST00000504807 EPHX2P34913 555 aa17.41■□□□□ 0.38
DDX41-204ENST00000504807 EIF4A1P60842 406 aaKnown RBP17.41■□□□□ 0.38
DDX41-204ENST00000504807 RALBP1Q15311 655 aa17.41■□□□□ 0.38
DDX41-204ENST00000504807 HLFQ16534 295 aa17.41■□□□□ 0.38
DDX41-204ENST00000504807 HACL1Q9UJ83 578 aa17.41■□□□□ 0.38
DDX41-204ENST00000504807 DGKZQ13574 1117 aa17.4■□□□□ 0.38
DDX41-204ENST00000504807 CCDC146Q8IYE0 955 aa17.4■□□□□ 0.38
DDX41-204ENST00000504807 ECE1P42892 770 aa17.39■□□□□ 0.37
DDX41-204ENST00000504807 RRP7AQ9Y3A4 280 aaKnown RBP17.39■□□□□ 0.37
DDX41-204ENST00000504807 MYBBP1AQ9BQG0 1328 aaKnown RBP17.39■□□□□ 0.37
DDX41-204ENST00000504807 ZNF541Q9H0D2 1346 aa17.39■□□□□ 0.37
DDX41-204ENST00000504807 FMR1Q06787 632 aaKnown RBP eCLIP17.38■□□□□ 0.37
DDX41-204ENST00000504807 BRIP1Q9BX63 1249 aa17.38■□□□□ 0.37
DDX41-204ENST00000504807 DDX21Q9NR30 783 aaKnown RBP eCLIP17.38■□□□□ 0.37
DDX41-204ENST00000504807 DICER1Q9UPY3 1922 aaKnown RBP17.38■□□□□ 0.37
DDX41-204ENST00000504807 RNF123Q5XPI4 1314 aa17.38■□□□□ 0.37
DDX41-204ENST00000504807 AOC2O75106 756 aa17.37■□□□□ 0.37
DDX41-204ENST00000504807 PDE6BP35913 854 aa17.37■□□□□ 0.37
DDX41-204ENST00000504807 SOX10P56693 466 aa17.37■□□□□ 0.37
DDX41-204ENST00000504807 PRPF38BQ5VTL8 546 aaKnown RBP17.37■□□□□ 0.37
DDX41-204ENST00000504807 TTLL7Q6ZT98 887 aa17.37■□□□□ 0.37
DDX41-204ENST00000504807 PNMA8AQ86V59 439 aaPredicted RBP17.37■□□□□ 0.37
DDX41-204ENST00000504807 SETDB2Q96T68 719 aa17.37■□□□□ 0.37
DDX41-204ENST00000504807 MAPK8IP3Q9UPT6 1336 aa17.37■□□□□ 0.37
DDX41-204ENST00000504807 FER1L6Q2WGJ9 1857 aa17.36■□□□□ 0.37
DDX41-204ENST00000504807 TMPOP42166 694 aaKnown RBP17.36■□□□□ 0.37
DDX41-204ENST00000504807 RIPK4P57078 832 aa17.36■□□□□ 0.37
DDX41-204ENST00000504807 LRP10Q7Z4F1 713 aa17.36■□□□□ 0.37
DDX41-204ENST00000504807 CNBD1Q8NA66 436 aa17.36■□□□□ 0.37
DDX41-204ENST00000504807 SCN4AP35499 1836 aa17.35■□□□□ 0.37
DDX41-204ENST00000504807 SLX4Q8IY92 1834 aa17.35■□□□□ 0.37
DDX41-204ENST00000504807 PRPF40BQ6NWY9 871 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms