RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 TMEM132EQ6IEE7 984 aa11.3□□□□□ -0.6
CASC9-201ENST00000504531 THEMISQ8N1K5 641 aaPredicted RBP11.3□□□□□ -0.6
CASC9-201ENST00000504531 TCP11L2Q8N4U5 519 aa11.3□□□□□ -0.6
CASC9-201ENST00000504531 ZNF428Q96B54 188 aa11.3□□□□□ -0.6
CASC9-201ENST00000504531 ALKQ9UM73 1620 aa11.3□□□□□ -0.6
CASC9-201ENST00000504531 CDC42BPGQ6DT37 1551 aa11.29□□□□□ -0.6
CASC9-201ENST00000504531 TRIM32Q13049 653 aa11.29□□□□□ -0.6
CASC9-201ENST00000504531 TMEM259Q4ZIN3 620 aa11.29□□□□□ -0.6
CASC9-201ENST00000504531 C20orf194Q5TEA3 1177 aa11.29□□□□□ -0.6
CASC9-201ENST00000504531 ZNF697Q5TEC3 545 aa11.29□□□□□ -0.6
CASC9-201ENST00000504531 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.29□□□□□ -0.6
CASC9-201ENST00000504531 PMFBP1Q8TBY8 1022 aa11.29□□□□□ -0.6
CASC9-201ENST00000504531 ATP7BP35670 1465 aa11.29□□□□□ -0.6
CASC9-201ENST00000504531 MAPK8IP3Q9UPT6 1336 aa11.29□□□□□ -0.6
CASC9-201ENST00000504531 PPM1GO15355 546 aaPredicted RBP11.28□□□□□ -0.6
CASC9-201ENST00000504531 CTHP32929 405 aa11.28□□□□□ -0.6
CASC9-201ENST00000504531 CCDC146Q8IYE0 955 aa11.28□□□□□ -0.6
CASC9-201ENST00000504531 COL3A1P02461 1466 aaPredicted RBP11.27□□□□□ -0.6
CASC9-201ENST00000504531 NLRP1Q9C000 1473 aa11.27□□□□□ -0.6
CASC9-201ENST00000504531 AP1G2O75843 785 aa11.27□□□□□ -0.61
CASC9-201ENST00000504531 F12P00748 615 aaPredicted RBP11.27□□□□□ -0.61
CASC9-201ENST00000504531 RARSP54136 660 aaKnown RBP11.27□□□□□ -0.61
CASC9-201ENST00000504531 HDGFL2Q7Z4V5 671 aaPredicted RBP11.27□□□□□ -0.61
CASC9-201ENST00000504531 UNC93B1Q9H1C4 597 aa11.27□□□□□ -0.61
CASC9-201ENST00000504531 A0A1W2PP64 1363 aa11.27□□□□□ -0.61
CASC9-201ENST00000504531 A2ML1A8K2U0 1454 aa11.26□□□□□ -0.61
CASC9-201ENST00000504531 CD163L1Q9NR16 1453 aa11.26□□□□□ -0.61
CASC9-201ENST00000504531 MYO5BQ9ULV0 1848 aa11.26□□□□□ -0.61
CASC9-201ENST00000504531 CTDSPL2Q05D32 466 aa11.26□□□□□ -0.61
CASC9-201ENST00000504531 PTCRAQ6ISU1 281 aaPredicted RBP11.26□□□□□ -0.61
CASC9-201ENST00000504531 CLUAP1Q96AJ1 413 aa11.26□□□□□ -0.61
CASC9-201ENST00000504531 FAM135BQ49AJ0 1406 aa11.26□□□□□ -0.61
CASC9-201ENST00000504531 PLEKHF1Q96S99 279 aa11.25□□□□□ -0.61
CASC9-201ENST00000504531 IRX2Q9BZI1 471 aaPredicted RBP11.25□□□□□ -0.61
CASC9-201ENST00000504531 TECPR2O15040 1411 aa11.25□□□□□ -0.61
CASC9-201ENST00000504531 SETD1AO15047 1707 aaKnown RBP11.24□□□□□ -0.61
CASC9-201ENST00000504531 SENP3-EIF4A1A0A087X0R7 540 aa11.24□□□□□ -0.61
CASC9-201ENST00000504531 FYB1O15117 783 aa11.24□□□□□ -0.61
CASC9-201ENST00000504531 WNT7BP56706 349 aa11.24□□□□□ -0.61
CASC9-201ENST00000504531 LAPTM4AQ15012 233 aa11.24□□□□□ -0.61
CASC9-201ENST00000504531 ARMC2Q8NEN0 867 aa11.24□□□□□ -0.61
CASC9-201ENST00000504531 TNRQ92752 1358 aa11.24□□□□□ -0.61
CASC9-201ENST00000504531 KNDC1Q76NI1 1749 aa11.23□□□□□ -0.61
CASC9-201ENST00000504531 BCAR3O75815 825 aa11.23□□□□□ -0.61
CASC9-201ENST00000504531 PRR20EP86478 221 aa11.23□□□□□ -0.61
CASC9-201ENST00000504531 PRR20CP86479 221 aa11.23□□□□□ -0.61
CASC9-201ENST00000504531 PRR20DP86480 221 aa11.23□□□□□ -0.61
CASC9-201ENST00000504531 PRR20BP86481 221 aa11.23□□□□□ -0.61
CASC9-201ENST00000504531 PRR20AP86496 221 aa11.23□□□□□ -0.61
CASC9-201ENST00000504531 POGKQ9P215 609 aa11.23□□□□□ -0.61
CASC9-201ENST00000504531 MAP10Q9P2G4 905 aa11.23□□□□□ -0.61
CASC9-201ENST00000504531 AATKQ6ZMQ8 1374 aa11.23□□□□□ -0.61
CASC9-201ENST00000504531 PPIP5K1Q6PFW1 1433 aa11.23□□□□□ -0.61
CASC9-201ENST00000504531 SRPK2P78362 688 aaKnown RBP11.22□□□□□ -0.61
CASC9-201ENST00000504531 CALD1Q05682 793 aaKnown RBP11.22□□□□□ -0.61
CASC9-201ENST00000504531 CPSF1Q10570 1443 aaKnown RBP11.22□□□□□ -0.61
CASC9-201ENST00000504531 MED1Q15648 1581 aaPredicted RBP11.22□□□□□ -0.61
CASC9-201ENST00000504531 TMEM132AQ24JP5 1023 aa11.22□□□□□ -0.61
CASC9-201ENST00000504531 KIF20BQ96Q89 1820 aa11.22□□□□□ -0.61
CASC9-201ENST00000504531 PRAM1Q96QH2 718 aa11.22□□□□□ -0.61
CASC9-201ENST00000504531 CHMP4BQ9H444 224 aaKnown RBP11.22□□□□□ -0.61
CASC9-201ENST00000504531 RIMS2Q9UQ26 1411 aa11.22□□□□□ -0.61
CASC9-201ENST00000504531 VIRMAQ69YN4 1812 aaKnown RBP11.21□□□□□ -0.61
CASC9-201ENST00000504531 CEP170BQ9Y4F5 1589 aaPredicted RBP11.21□□□□□ -0.61
CASC9-201ENST00000504531 USP17L8P0C7I0 530 aa11.21□□□□□ -0.61
CASC9-201ENST00000504531 U2AF1L5P0DN76 240 aaPredicted RBP11.21□□□□□ -0.61
CASC9-201ENST00000504531 TMPOP42166 694 aaKnown RBP11.21□□□□□ -0.61
CASC9-201ENST00000504531 U2AF1Q01081 240 aaKnown RBP eCLIP11.21□□□□□ -0.61
CASC9-201ENST00000504531 ALDH1L2Q3SY69 923 aa11.21□□□□□ -0.61
CASC9-201ENST00000504531 C8orf34Q49A92 452 aa11.21□□□□□ -0.61
CASC9-201ENST00000504531 BANK1Q8NDB2 785 aa11.21□□□□□ -0.61
CASC9-201ENST00000504531 CDK19Q9BWU1 502 aa11.21□□□□□ -0.61
CASC9-201ENST00000504531 RWDD1Q9H446 243 aaPredicted RBP11.21□□□□□ -0.61
CASC9-201ENST00000504531 EDC4Q6P2E9 1401 aaKnown RBP11.2□□□□□ -0.62
CASC9-201ENST00000504531 DIAPH1O60610 1272 aaKnown RBP11.2□□□□□ -0.62
CASC9-201ENST00000504531 ZKSCAN2Q63HK3 967 aa11.2□□□□□ -0.62
CASC9-201ENST00000504531 PDZRN3Q9UPQ7 1066 aa11.2□□□□□ -0.62
CASC9-201ENST00000504531 CPS1P31327 1500 aa11.19□□□□□ -0.62
CASC9-201ENST00000504531 WNT7AO00755 349 aa11.19□□□□□ -0.62
CASC9-201ENST00000504531 GDF9O60383 454 aa11.19□□□□□ -0.62
CASC9-201ENST00000504531 CANXP27824 592 aaKnown RBP11.19□□□□□ -0.62
CASC9-201ENST00000504531 LRRN4Q8WUT4 740 aa11.19□□□□□ -0.62
CASC9-201ENST00000504531 NRG2O14511 850 aaPredicted RBP11.18□□□□□ -0.62
CASC9-201ENST00000504531 IPO8O15397 1037 aaKnown RBP11.18□□□□□ -0.62
CASC9-201ENST00000504531 GFRA3O60609 400 aa11.18□□□□□ -0.62
CASC9-201ENST00000504531 FOXC1Q12948 553 aa11.18□□□□□ -0.62
CASC9-201ENST00000504531 NBPF14Q5TI25 921 aa11.18□□□□□ -0.62
CASC9-201ENST00000504531 PNMA1Q8ND90 353 aa11.18□□□□□ -0.62
CASC9-201ENST00000504531 BAP1Q92560 729 aa11.18□□□□□ -0.62
CASC9-201ENST00000504531 NPHP4O75161 1426 aaPredicted RBP11.18□□□□□ -0.62
CASC9-201ENST00000504531 KIF16BQ96L93 1317 aa11.17□□□□□ -0.62
CASC9-201ENST00000504531 HDAC1Q13547 482 aaPredicted RBP11.17□□□□□ -0.62
CASC9-201ENST00000504531 MVPQ14764 893 aaKnown RBP11.17□□□□□ -0.62
CASC9-201ENST00000504531 TRIM67Q6ZTA4 783 aa11.17□□□□□ -0.62
CASC9-201ENST00000504531 ZNF511Q8NB15 262 aa11.17□□□□□ -0.62
CASC9-201ENST00000504531 ARHGAP45Q92619 1136 aa11.17□□□□□ -0.62
CASC9-201ENST00000504531 GPKOWQ92917 476 aaPredicted RBP eCLIP11.17□□□□□ -0.62
CASC9-201ENST00000504531 PKD2L1Q9P0L9 805 aa11.17□□□□□ -0.62
CASC9-201ENST00000504531 DDX19BQ9UMR2 479 aa11.17□□□□□ -0.62
CASC9-201ENST00000504531 CDK12Q9NYV4 1490 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms