RNA–Protein interactions for RNA: ENST00000504121.5

SLC1A3-205, Transcript of solute carrier family 1 member 3, humanhuman

TSL 2

Gene SLC1A3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-205ENST00000504121 NUDCQ9Y266 331 aa12.94□□□□□ -0.34
SLC1A3-205ENST00000504121 AFDNP55196 1824 aaKnown RBP12.94□□□□□ -0.34
SLC1A3-205ENST00000504121 KLRG2A4D1S0 409 aaPredicted RBP12.93□□□□□ -0.34
SLC1A3-205ENST00000504121 SLC39A6Q13433 755 aa12.93□□□□□ -0.34
SLC1A3-205ENST00000504121 NEUROD2Q15784 382 aa12.93□□□□□ -0.34
SLC1A3-205ENST00000504121 C2CD5Q86YS7 1000 aa12.93□□□□□ -0.34
SLC1A3-205ENST00000504121 IL17REQ8NFR9 667 aa12.93□□□□□ -0.34
SLC1A3-205ENST00000504121 SETDB2Q96T68 719 aa12.93□□□□□ -0.34
SLC1A3-205ENST00000504121 RRAGCQ9HB90 399 aa12.93□□□□□ -0.34
SLC1A3-205ENST00000504121 WWC3Q9ULE0 1092 aa12.93□□□□□ -0.34
SLC1A3-205ENST00000504121 ZNF652Q9Y2D9 606 aa12.93□□□□□ -0.34
SLC1A3-205ENST00000504121 VIRMAQ69YN4 1812 aaKnown RBP12.92□□□□□ -0.34
SLC1A3-205ENST00000504121 HMOX1P09601 288 aa12.92□□□□□ -0.34
SLC1A3-205ENST00000504121 ZNF496Q96IT1 587 aaPredicted RBP12.92□□□□□ -0.34
SLC1A3-205ENST00000504121 COL3A1P02461 1466 aaPredicted RBP12.91□□□□□ -0.34
SLC1A3-205ENST00000504121 MASTLQ96GX5 879 aa12.91□□□□□ -0.34
SLC1A3-205ENST00000504121 DICER1Q9UPY3 1922 aaKnown RBP12.9□□□□□ -0.34
SLC1A3-205ENST00000504121 SIPA1L3O60292 1781 aaPredicted RBP12.9□□□□□ -0.34
SLC1A3-205ENST00000504121 IQCA1LA6NCM1 817 aa12.9□□□□□ -0.34
SLC1A3-205ENST00000504121 NFKBIEO00221 500 aa12.9□□□□□ -0.34
SLC1A3-205ENST00000504121 SRGNP10124 158 aa12.9□□□□□ -0.34
SLC1A3-205ENST00000504121 CANXP27824 592 aaKnown RBP12.9□□□□□ -0.34
SLC1A3-205ENST00000504121 ST5P78524 1137 aa12.9□□□□□ -0.34
SLC1A3-205ENST00000504121 PRR5LQ6MZQ0 368 aa12.9□□□□□ -0.34
SLC1A3-205ENST00000504121 SNRPA1P09661 255 aaKnown RBP12.89□□□□□ -0.35
SLC1A3-205ENST00000504121 CC2D2BQ6DHV5 1058 aa12.89□□□□□ -0.35
SLC1A3-205ENST00000504121 TPTE2Q6XPS3 522 aa12.89□□□□□ -0.35
SLC1A3-205ENST00000504121 CNBD1Q8NA66 436 aa12.89□□□□□ -0.35
SLC1A3-205ENST00000504121 L3MBTL3Q96JM7 780 aaPredicted RBP12.89□□□□□ -0.35
SLC1A3-205ENST00000504121 TAOK3Q9H2K8 898 aa12.89□□□□□ -0.35
SLC1A3-205ENST00000504121 SCN7AQ01118 1682 aa12.89□□□□□ -0.35
SLC1A3-205ENST00000504121 FER1L6Q2WGJ9 1857 aa12.89□□□□□ -0.35
SLC1A3-205ENST00000504121 BTBD11A6QL63 1104 aa12.88□□□□□ -0.35
SLC1A3-205ENST00000504121 CAMTA2O94983 1202 aa12.88□□□□□ -0.35
SLC1A3-205ENST00000504121 ERFEQ4G0M1 354 aa12.88□□□□□ -0.35
SLC1A3-205ENST00000504121 TBC1D9BQ66K14 1250 aa12.88□□□□□ -0.35
SLC1A3-205ENST00000504121 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.88□□□□□ -0.35
SLC1A3-205ENST00000504121 PNISRQ8TF01 805 aaKnown RBP12.88□□□□□ -0.35
SLC1A3-205ENST00000504121 RTF1Q92541 710 aaKnown RBP12.88□□□□□ -0.35
SLC1A3-205ENST00000504121 ZMYND15Q9H091 742 aa12.88□□□□□ -0.35
SLC1A3-205ENST00000504121 CREBZFQ9NS37 354 aa12.88□□□□□ -0.35
SLC1A3-205ENST00000504121 NPR1P16066 1061 aa12.87□□□□□ -0.35
SLC1A3-205ENST00000504121 ALDH1B1P30837 517 aa12.87□□□□□ -0.35
SLC1A3-205ENST00000504121 RTKN2Q8IZC4 609 aa12.87□□□□□ -0.35
SLC1A3-205ENST00000504121 RSPH6AQ9H0K4 717 aa12.87□□□□□ -0.35
SLC1A3-205ENST00000504121 POTECB2RU33 542 aa12.86□□□□□ -0.35
SLC1A3-205ENST00000504121 U2SURPO15042 1029 aaKnown RBP12.86□□□□□ -0.35
SLC1A3-205ENST00000504121 CC2D1BQ5T0F9 858 aaKnown RBP12.86□□□□□ -0.35
SLC1A3-205ENST00000504121 DZIP3Q86Y13 1208 aaKnown RBP12.86□□□□□ -0.35
SLC1A3-205ENST00000504121 C7orf43Q8WVR3 580 aa12.86□□□□□ -0.35
SLC1A3-205ENST00000504121 PNNQ9H307 717 aaKnown RBP12.86□□□□□ -0.35
SLC1A3-205ENST00000504121 ARFGEF2Q9Y6D5 1785 aa12.86□□□□□ -0.35
SLC1A3-205ENST00000504121 ERVV-1B6SEH8 477 aa12.85□□□□□ -0.35
SLC1A3-205ENST00000504121 RASSF7Q02833 373 aa12.85□□□□□ -0.35
SLC1A3-205ENST00000504121 CCDC93Q567U6 631 aa12.85□□□□□ -0.35
SLC1A3-205ENST00000504121 CHADLQ6NUI6 762 aa12.85□□□□□ -0.35
SLC1A3-205ENST00000504121 ZNF622Q969S3 477 aaKnown RBP eCLIP12.85□□□□□ -0.35
SLC1A3-205ENST00000504121 VPS33BQ9H267 617 aa12.85□□□□□ -0.35
SLC1A3-205ENST00000504121 RIC1Q4ADV7 1423 aa12.85□□□□□ -0.35
SLC1A3-205ENST00000504121 SCN4AP35499 1836 aa12.85□□□□□ -0.35
SLC1A3-205ENST00000504121 IBTKQ9P2D0 1353 aaPredicted RBP12.84□□□□□ -0.35
SLC1A3-205ENST00000504121 NEFMP07197 916 aa12.84□□□□□ -0.35
SLC1A3-205ENST00000504121 PRELPP51888 382 aa12.84□□□□□ -0.35
SLC1A3-205ENST00000504121 PRPF40BQ6NWY9 871 aaKnown RBP12.84□□□□□ -0.35
SLC1A3-205ENST00000504121 PNMA8AQ86V59 439 aaPredicted RBP12.84□□□□□ -0.35
SLC1A3-205ENST00000504121 LDHDQ86WU2 507 aa12.84□□□□□ -0.35
SLC1A3-205ENST00000504121 ARID3AQ99856 593 aa12.84□□□□□ -0.35
SLC1A3-205ENST00000504121 NYXQ9GZU5 481 aa12.84□□□□□ -0.35
SLC1A3-205ENST00000504121 TBC1D2BQ9UPU7 963 aa12.84□□□□□ -0.35
SLC1A3-205ENST00000504121 ANKRD31Q8N7Z5 1873 aa12.84□□□□□ -0.35
SLC1A3-205ENST00000504121 ERBB4Q15303 1308 aa12.84□□□□□ -0.35
SLC1A3-205ENST00000504121 CCDC88AQ3V6T2 1871 aa12.83□□□□□ -0.36
SLC1A3-205ENST00000504121 TIAM2Q8IVF5 1701 aa12.83□□□□□ -0.36
SLC1A3-205ENST00000504121 NPHP1O15259 732 aa12.83□□□□□ -0.36
SLC1A3-205ENST00000504121 C21orf2O43822 256 aa12.83□□□□□ -0.36
SLC1A3-205ENST00000504121 A1BGP04217 495 aa12.83□□□□□ -0.36
SLC1A3-205ENST00000504121 PRKAR2BP31323 418 aa12.83□□□□□ -0.36
SLC1A3-205ENST00000504121 TAF7Q15545 349 aaPredicted RBP12.83□□□□□ -0.36
SLC1A3-205ENST00000504121 NBPF5PQ86XG9 351 aaPredicted RBP12.83□□□□□ -0.36
SLC1A3-205ENST00000504121 PSMD1Q99460 953 aa12.83□□□□□ -0.36
SLC1A3-205ENST00000504121 BABAM1Q9NWV8 329 aa12.83□□□□□ -0.36
SLC1A3-205ENST00000504121 BCORQ6W2J9 1755 aa12.82□□□□□ -0.36
SLC1A3-205ENST00000504121 FKBP4Q02790 459 aaKnown RBP eCLIP12.82□□□□□ -0.36
SLC1A3-205ENST00000504121 CRY2Q49AN0 593 aa12.82□□□□□ -0.36
SLC1A3-205ENST00000504121 BICDL1Q6ZP65 573 aa12.82□□□□□ -0.36
SLC1A3-205ENST00000504121 USP16Q9Y5T5 823 aa12.82□□□□□ -0.36
SLC1A3-205ENST00000504121 PHACTR3Q96KR7 559 aa12.81□□□□□ -0.36
SLC1A3-205ENST00000504121 PRDM10Q9NQV6 1147 aa12.81□□□□□ -0.36
SLC1A3-205ENST00000504121 RNF123Q5XPI4 1314 aa12.81□□□□□ -0.36
SLC1A3-205ENST00000504121 PASKQ96RG2 1323 aa12.81□□□□□ -0.36
SLC1A3-205ENST00000504121 FZD9O00144 591 aa12.8□□□□□ -0.36
SLC1A3-205ENST00000504121 GTPBP6O43824 516 aaPredicted RBP12.8□□□□□ -0.36
SLC1A3-205ENST00000504121 HOXA10P31260 410 aaPredicted RBP12.8□□□□□ -0.36
SLC1A3-205ENST00000504121 U2AF1L5P0DN76 240 aaPredicted RBP12.79□□□□□ -0.36
SLC1A3-205ENST00000504121 U2AF1Q01081 240 aaKnown RBP eCLIP12.79□□□□□ -0.36
SLC1A3-205ENST00000504121 COL13A1Q5TAT6 717 aaPredicted RBP12.79□□□□□ -0.36
SLC1A3-205ENST00000504121 TNS4Q8IZW8 715 aa12.79□□□□□ -0.36
SLC1A3-205ENST00000504121 GPC2Q8N158 579 aa12.79□□□□□ -0.36
SLC1A3-205ENST00000504121 TAF1DQ9H5J8 278 aaPredicted RBP12.79□□□□□ -0.36
SLC1A3-205ENST00000504121 SLX4Q8IY92 1834 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms