RNA–Protein interactions for RNA: ENST00000504101.1

POLR2J3-208, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-208ENST00000504101 CEMIPQ8WUJ3 1361 aa22.72■■□□□ 1.23
POLR2J3-208ENST00000504101 ARFGEF2Q9Y6D5 1785 aa22.71■■□□□ 1.23
POLR2J3-208ENST00000504101 SRGNP10124 158 aa22.71■■□□□ 1.23
POLR2J3-208ENST00000504101 CNGB1Q14028 1251 aaPredicted RBP22.71■■□□□ 1.23
POLR2J3-208ENST00000504101 CHADLQ6NUI6 762 aa22.71■■□□□ 1.23
POLR2J3-208ENST00000504101 DDNO94850 711 aaPredicted RBP22.7■■□□□ 1.22
POLR2J3-208ENST00000504101 SOGA3Q5TF21 947 aa22.7■■□□□ 1.22
POLR2J3-208ENST00000504101 DZIP3Q86Y13 1208 aaKnown RBP22.7■■□□□ 1.22
POLR2J3-208ENST00000504101 MASTLQ96GX5 879 aa22.7■■□□□ 1.22
POLR2J3-208ENST00000504101 NPC1L1Q9UHC9 1359 aa22.7■■□□□ 1.22
POLR2J3-208ENST00000504101 BTBD11A6QL63 1104 aa22.69■■□□□ 1.22
POLR2J3-208ENST00000504101 KCNQ3O43525 872 aa22.69■■□□□ 1.22
POLR2J3-208ENST00000504101 CREBZFQ9NS37 354 aa22.69■■□□□ 1.22
POLR2J3-208ENST00000504101 POTEIP0CG38 1075 aa22.68■■□□□ 1.22
POLR2J3-208ENST00000504101 POTEJP0CG39 1038 aa22.68■■□□□ 1.22
POLR2J3-208ENST00000504101 PRKAR2BP31323 418 aa22.66■■□□□ 1.22
POLR2J3-208ENST00000504101 PIP4K2AP48426 406 aaPredicted RBP22.66■■□□□ 1.22
POLR2J3-208ENST00000504101 NBPF5PQ86XG9 351 aaPredicted RBP22.66■■□□□ 1.22
POLR2J3-208ENST00000504101 PHACTR3Q96KR7 559 aa22.66■■□□□ 1.22
POLR2J3-208ENST00000504101 MKRN1Q9UHC7 482 aaKnown RBP22.66■■□□□ 1.22
POLR2J3-208ENST00000504101 IQCA1LA6NCM1 817 aa22.65■■□□□ 1.22
POLR2J3-208ENST00000504101 USP16Q9Y5T5 823 aa22.65■■□□□ 1.22
POLR2J3-208ENST00000504101 CCDC93Q567U6 631 aa22.64■■□□□ 1.21
POLR2J3-208ENST00000504101 CLEC4GQ6UXB4 293 aa22.64■■□□□ 1.21
POLR2J3-208ENST00000504101 RSPH6AQ9H0K4 717 aa22.64■■□□□ 1.21
POLR2J3-208ENST00000504101 ZNF652Q9Y2D9 606 aa22.64■■□□□ 1.21
POLR2J3-208ENST00000504101 PRAMEF22A3QJZ6 481 aa22.63■■□□□ 1.21
POLR2J3-208ENST00000504101 L3MBTL3Q96JM7 780 aaPredicted RBP22.63■■□□□ 1.21
POLR2J3-208ENST00000504101 SCN4AP35499 1836 aa22.63■■□□□ 1.21
POLR2J3-208ENST00000504101 LDHDQ86WU2 507 aa22.62■■□□□ 1.21
POLR2J3-208ENST00000504101 C7orf43Q8WVR3 580 aa22.62■■□□□ 1.21
POLR2J3-208ENST00000504101 SNRPA1P09661 255 aaKnown RBP22.61■■□□□ 1.21
POLR2J3-208ENST00000504101 NPR1P16066 1061 aa22.61■■□□□ 1.21
POLR2J3-208ENST00000504101 CFAP53Q96M91 514 aa22.61■■□□□ 1.21
POLR2J3-208ENST00000504101 TAF1DQ9H5J8 278 aaPredicted RBP22.61■■□□□ 1.21
POLR2J3-208ENST00000504101 CNTNAP1P78357 1384 aa22.61■■□□□ 1.21
POLR2J3-208ENST00000504101 PASKQ96RG2 1323 aa22.6■■□□□ 1.21
POLR2J3-208ENST00000504101 FKBP4Q02790 459 aaKnown RBP eCLIP22.6■■□□□ 1.21
POLR2J3-208ENST00000504101 RTF1Q92541 710 aaKnown RBP22.59■■□□□ 1.21
POLR2J3-208ENST00000504101 ZNF277Q9NRM2 450 aaPredicted RBP22.59■■□□□ 1.21
POLR2J3-208ENST00000504101 NIP7Q9Y221 180 aaKnown RBP eCLIP22.59■■□□□ 1.21
POLR2J3-208ENST00000504101 ZNF541Q9H0D2 1346 aa22.58■■□□□ 1.21
POLR2J3-208ENST00000504101 KLRG2A4D1S0 409 aaPredicted RBP22.58■■□□□ 1.21
POLR2J3-208ENST00000504101 TPTE2Q6XPS3 522 aa22.58■■□□□ 1.21
POLR2J3-208ENST00000504101 MCM10Q7L590 875 aa22.58■■□□□ 1.21
POLR2J3-208ENST00000504101 NUDCQ9Y266 331 aa22.58■■□□□ 1.21
POLR2J3-208ENST00000504101 FAM177BA6PVY3 158 aa22.56■■□□□ 1.2
POLR2J3-208ENST00000504101 NBPF26B4DH59 902 aa22.56■■□□□ 1.2
POLR2J3-208ENST00000504101 RGL2O15211 777 aa22.56■■□□□ 1.2
POLR2J3-208ENST00000504101 EAPPQ56P03 285 aaPredicted RBP22.56■■□□□ 1.2
POLR2J3-208ENST00000504101 NBPF10Q6P3W6 841 aaKnown RBP22.56■■□□□ 1.2
POLR2J3-208ENST00000504101 OLFM4Q6UX06 510 aa22.56■■□□□ 1.2
POLR2J3-208ENST00000504101 RTKN2Q8IZC4 609 aa22.56■■□□□ 1.2
POLR2J3-208ENST00000504101 NBPF15Q8N660 670 aa22.56■■□□□ 1.2
POLR2J3-208ENST00000504101 FOXN1O15353 648 aa22.55■■□□□ 1.2
POLR2J3-208ENST00000504101 U2AF1L5P0DN76 240 aaPredicted RBP22.55■■□□□ 1.2
POLR2J3-208ENST00000504101 U2AF1Q01081 240 aaKnown RBP eCLIP22.55■■□□□ 1.2
POLR2J3-208ENST00000504101 HACL1Q9UJ83 578 aa22.55■■□□□ 1.2
POLR2J3-208ENST00000504101 TMEM88BA6NKF7 163 aa22.54■■□□□ 1.2
POLR2J3-208ENST00000504101 DCTN1Q14203 1278 aa22.54■■□□□ 1.2
POLR2J3-208ENST00000504101 ITGBL1O95965 494 aaPredicted RBP22.53■■□□□ 1.2
POLR2J3-208ENST00000504101 CLEC11AQ9Y240 323 aa22.53■■□□□ 1.2
POLR2J3-208ENST00000504101 ADAMTSL1Q8N6G6 1762 aa22.53■■□□□ 1.2
POLR2J3-208ENST00000504101 ALDH1B1P30837 517 aa22.52■■□□□ 1.2
POLR2J3-208ENST00000504101 EPHX2P34913 555 aa22.52■■□□□ 1.2
POLR2J3-208ENST00000504101 IARSP41252 1262 aaKnown RBP22.52■■□□□ 1.2
POLR2J3-208ENST00000504101 AIDAQ96BJ3 306 aa22.52■■□□□ 1.2
POLR2J3-208ENST00000504101 LAMB4A4D0S4 1761 aa22.51■■□□□ 1.19
POLR2J3-208ENST00000504101 GTF2E1P29083 439 aaPredicted RBP22.51■■□□□ 1.19
POLR2J3-208ENST00000504101 VEGFBP49765 207 aa22.51■■□□□ 1.19
POLR2J3-208ENST00000504101 HLFQ16534 295 aa22.51■■□□□ 1.19
POLR2J3-208ENST00000504101 RNF123Q5XPI4 1314 aa22.51■■□□□ 1.19
POLR2J3-208ENST00000504101 FZD9O00144 591 aa22.5■■□□□ 1.19
POLR2J3-208ENST00000504101 HTATSF1O43719 755 aaKnown RBP22.5■■□□□ 1.19
POLR2J3-208ENST00000504101 SYNE4Q8N205 404 aa22.5■■□□□ 1.19
POLR2J3-208ENST00000504101 PRDM10Q9NQV6 1147 aa22.5■■□□□ 1.19
POLR2J3-208ENST00000504101 CTCFP49711 727 aaPredicted RBP22.49■■□□□ 1.19
POLR2J3-208ENST00000504101 PNMA8AQ86V59 439 aaPredicted RBP22.49■■□□□ 1.19
POLR2J3-208ENST00000504101 ABCC12Q96J65 1359 aa22.49■■□□□ 1.19
POLR2J3-208ENST00000504101 SNED1Q8TER0 1413 aa22.48■■□□□ 1.19
POLR2J3-208ENST00000504101 PPP2R1AP30153 589 aa22.48■■□□□ 1.19
POLR2J3-208ENST00000504101 TAF7Q15545 349 aaPredicted RBP22.48■■□□□ 1.19
POLR2J3-208ENST00000504101 GPC2Q8N158 579 aa22.48■■□□□ 1.19
POLR2J3-208ENST00000504101 CRY2Q49AN0 593 aa22.47■■□□□ 1.19
POLR2J3-208ENST00000504101 MAP1SQ66K74 1059 aaPredicted RBP22.47■■□□□ 1.19
POLR2J3-208ENST00000504101 CNTROBQ8N137 903 aa22.47■■□□□ 1.19
POLR2J3-208ENST00000504101 JDP2Q8WYK2 163 aa22.47■■□□□ 1.19
POLR2J3-208ENST00000504101 PSMD1Q99460 953 aa22.47■■□□□ 1.19
POLR2J3-208ENST00000504101 NYXQ9GZU5 481 aa22.47■■□□□ 1.19
POLR2J3-208ENST00000504101 NUTM1Q86Y26 1132 aa22.46■■□□□ 1.19
POLR2J3-208ENST00000504101 MIS18AQ9NYP9 233 aa22.46■■□□□ 1.19
POLR2J3-208ENST00000504101 NGEFQ8N5V2 710 aa22.45■■□□□ 1.18
POLR2J3-208ENST00000504101 WBP1LQ9NX94 342 aa22.45■■□□□ 1.18
POLR2J3-208ENST00000504101 RASSF10A6NK89 507 aa22.44■■□□□ 1.18
POLR2J3-208ENST00000504101 NUP98P52948 1817 aa22.44■■□□□ 1.18
POLR2J3-208ENST00000504101 CC2D2BQ6DHV5 1058 aa22.44■■□□□ 1.18
POLR2J3-208ENST00000504101 MAP3K15Q6ZN16 1313 aa22.43■■□□□ 1.18
POLR2J3-208ENST00000504101 ERVV-1B6SEH8 477 aa22.43■■□□□ 1.18
POLR2J3-208ENST00000504101 EIF6P56537 245 aaKnown RBP22.43■■□□□ 1.18
POLR2J3-208ENST00000504101 DEFB115Q30KQ5 88 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms