RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 KIAA1024Q9UPX6 916 aa8.72□□□□□ -1.01
SUB1-204ENST00000504016 EFSO43281 561 aa8.71□□□□□ -1.02
SUB1-204ENST00000504016 DGKGP49619 791 aa8.71□□□□□ -1.02
SUB1-204ENST00000504016 CLDN10P78369 228 aa8.71□□□□□ -1.02
SUB1-204ENST00000504016 ZNF468Q5VIY5 522 aaPredicted RBP8.71□□□□□ -1.02
SUB1-204ENST00000504016 OGFOD1Q8N543 542 aa8.71□□□□□ -1.02
SUB1-204ENST00000504016 UCN2Q96RP3 112 aa8.71□□□□□ -1.02
SUB1-204ENST00000504016 MKRN1Q9UHC7 482 aaKnown RBP8.71□□□□□ -1.02
SUB1-204ENST00000504016 CHMP3Q9Y3E7 222 aa8.71□□□□□ -1.02
SUB1-204ENST00000504016 SH3PXD2AQ5TCZ1 1133 aa8.7□□□□□ -1.02
SUB1-204ENST00000504016 LARGE2Q8N3Y3 721 aa8.7□□□□□ -1.02
SUB1-204ENST00000504016 RHPN1Q8TCX5 695 aa8.7□□□□□ -1.02
SUB1-204ENST00000504016 NOP53Q9NZM5 478 aaKnown RBP8.7□□□□□ -1.02
SUB1-204ENST00000504016 RBM19Q9Y4C8 960 aaKnown RBP8.7□□□□□ -1.02
SUB1-204ENST00000504016 GPC6Q9Y625 555 aaPredicted RBP8.7□□□□□ -1.02
SUB1-204ENST00000504016 PALM3A6NDB9 673 aaPredicted RBP8.69□□□□□ -1.02
SUB1-204ENST00000504016 PSMA6P60900 246 aaKnown RBP8.69□□□□□ -1.02
SUB1-204ENST00000504016 TSPAN10Q9H1Z9 355 aaPredicted RBP8.69□□□□□ -1.02
SUB1-204ENST00000504016 ADAM23O75077 832 aa8.68□□□□□ -1.02
SUB1-204ENST00000504016 SYT9Q86SS6 491 aa8.68□□□□□ -1.02
SUB1-204ENST00000504016 C7orf43Q8WVR3 580 aa8.68□□□□□ -1.02
SUB1-204ENST00000504016 HCN4Q9Y3Q4 1203 aa8.68□□□□□ -1.02
SUB1-204ENST00000504016 ALAS2P22557 587 aa8.67□□□□□ -1.02
SUB1-204ENST00000504016 CLUAP1Q96AJ1 413 aa8.67□□□□□ -1.02
SUB1-204ENST00000504016 ZNF594Q96JF6 807 aaPredicted RBP8.67□□□□□ -1.02
SUB1-204ENST00000504016 ELOA3CA0A087WX78 387 aaPredicted RBP8.66□□□□□ -1.02
SUB1-204ENST00000504016 ELOA3DA6NLF2 546 aaPredicted RBP8.66□□□□□ -1.02
SUB1-204ENST00000504016 SFI1A8K8P3 1242 aa8.66□□□□□ -1.02
SUB1-204ENST00000504016 M0R2N6 131 aa8.66□□□□□ -1.02
SUB1-204ENST00000504016 BAG6P46379 1132 aa8.66□□□□□ -1.02
SUB1-204ENST00000504016 SFSWAPQ12872 951 aaKnown RBP8.66□□□□□ -1.02
SUB1-204ENST00000504016 ELOA3BQ3SY89 546 aa8.66□□□□□ -1.02
SUB1-204ENST00000504016 C1orf53Q5VUE5 145 aa8.66□□□□□ -1.02
SUB1-204ENST00000504016 TSEN2Q8NCE0 465 aaKnown RBP8.66□□□□□ -1.02
SUB1-204ENST00000504016 ELOA3Q8NG57 546 aa8.66□□□□□ -1.02
SUB1-204ENST00000504016 ANKIB1Q9P2G1 1089 aa8.66□□□□□ -1.02
SUB1-204ENST00000504016 SIX5Q8N196 739 aa8.65□□□□□ -1.02
SUB1-204ENST00000504016 PHACTR1Q9C0D0 580 aa8.65□□□□□ -1.02
SUB1-204ENST00000504016 C1QTNF9BB2RNN3 333 aa8.64□□□□□ -1.03
SUB1-204ENST00000504016 PPP1R12BO60237 982 aaPredicted RBP8.64□□□□□ -1.03
SUB1-204ENST00000504016 RASA1P20936 1047 aa8.64□□□□□ -1.03
SUB1-204ENST00000504016 PROSER2Q86WR7 435 aaPredicted RBP8.64□□□□□ -1.03
SUB1-204ENST00000504016 GLMNQ92990 594 aa8.64□□□□□ -1.03
SUB1-204ENST00000504016 HSH2DQ96JZ2 352 aa8.64□□□□□ -1.03
SUB1-204ENST00000504016 CEP63Q96MT8 703 aa8.64□□□□□ -1.03
SUB1-204ENST00000504016 TFIP11Q9UBB9 837 aaKnown RBP8.64□□□□□ -1.03
SUB1-204ENST00000504016 SIN3BO75182 1162 aa8.63□□□□□ -1.03
SUB1-204ENST00000504016 HIRAP54198 1017 aaPredicted RBP8.63□□□□□ -1.03
SUB1-204ENST00000504016 NEUROD1Q13562 356 aa8.63□□□□□ -1.03
SUB1-204ENST00000504016 SLC30A3Q99726 388 aa8.63□□□□□ -1.03
SUB1-204ENST00000504016 PLVAPQ9BX97 442 aa8.63□□□□□ -1.03
SUB1-204ENST00000504016 K7ELQ4 463 aaPredicted RBP8.62□□□□□ -1.03
SUB1-204ENST00000504016 CD163Q86VB7 1156 aa8.62□□□□□ -1.03
SUB1-204ENST00000504016 FNBP4Q8N3X1 1017 aaPredicted RBP8.62□□□□□ -1.03
SUB1-204ENST00000504016 TRIM11Q96F44 468 aa8.62□□□□□ -1.03
SUB1-204ENST00000504016 BRD7Q9NPI1 651 aa8.62□□□□□ -1.03
SUB1-204ENST00000504016 ATAD2Q6PL18 1390 aa8.61□□□□□ -1.03
SUB1-204ENST00000504016 FURINP09958 794 aa8.61□□□□□ -1.03
SUB1-204ENST00000504016 SEC13P55735 322 aa8.61□□□□□ -1.03
SUB1-204ENST00000504016 SPEM2Q0P670 501 aa8.61□□□□□ -1.03
SUB1-204ENST00000504016 POTEAQ6S8J7 498 aa8.61□□□□□ -1.03
SUB1-204ENST00000504016 ZNF280CQ8ND82 737 aa8.61□□□□□ -1.03
SUB1-204ENST00000504016 CHMP7Q8WUX9 453 aaPredicted RBP8.61□□□□□ -1.03
SUB1-204ENST00000504016 SUSD3Q96L08 255 aa8.61□□□□□ -1.03
SUB1-204ENST00000504016 MAFBQ9Y5Q3 323 aaPredicted RBP8.61□□□□□ -1.03
SUB1-204ENST00000504016 GTF3C3Q9Y5Q9 886 aa8.61□□□□□ -1.03
SUB1-204ENST00000504016 ADARB2-AS1A8MUL3 147 aa8.6□□□□□ -1.03
SUB1-204ENST00000504016 C21orf2O43822 256 aa8.6□□□□□ -1.03
SUB1-204ENST00000504016 DKK1O94907 266 aa8.6□□□□□ -1.03
SUB1-204ENST00000504016 CHRNA4P43681 627 aa8.6□□□□□ -1.03
SUB1-204ENST00000504016 LARP1Q6PKG0 1096 aaKnown RBP8.6□□□□□ -1.03
SUB1-204ENST00000504016 ALDH16A1Q8IZ83 802 aa8.6□□□□□ -1.03
SUB1-204ENST00000504016 SCG3Q8WXD2 468 aaKnown RBP8.6□□□□□ -1.03
SUB1-204ENST00000504016 KCNH4Q9UQ05 1017 aa8.6□□□□□ -1.03
SUB1-204ENST00000504016 RAB44Q7Z6P3 723 aaPredicted RBP8.59□□□□□ -1.03
SUB1-204ENST00000504016 GAS2L2Q8NHY3 880 aa8.59□□□□□ -1.03
SUB1-204ENST00000504016 TNFRSF25Q93038 417 aa8.59□□□□□ -1.03
SUB1-204ENST00000504016 NGLY1Q96IV0 654 aa8.59□□□□□ -1.03
SUB1-204ENST00000504016 CALR3Q96L12 384 aaKnown RBP8.59□□□□□ -1.03
SUB1-204ENST00000504016 MDFIQ99750 246 aa8.59□□□□□ -1.03
SUB1-204ENST00000504016 HINFPQ9BQA5 517 aa8.59□□□□□ -1.03
SUB1-204ENST00000504016 SPDYE3A6NKU9 549 aa8.58□□□□□ -1.04
SUB1-204ENST00000504016 M0R082 166 aa8.58□□□□□ -1.04
SUB1-204ENST00000504016 SPATA31C1P0DKV0 1188 aa8.58□□□□□ -1.04
SUB1-204ENST00000504016 TYRO3Q06418 890 aa8.58□□□□□ -1.04
SUB1-204ENST00000504016 STAG2Q8N3U4 1231 aa8.58□□□□□ -1.04
SUB1-204ENST00000504016 ZNF417Q8TAU3 575 aa8.58□□□□□ -1.04
SUB1-204ENST00000504016 ZNF587Q96SQ5 575 aaPredicted RBP8.58□□□□□ -1.04
SUB1-204ENST00000504016 C2orf49Q9BVC5 232 aaPredicted RBP8.58□□□□□ -1.04
SUB1-204ENST00000504016 KCNQ4P56696 695 aa8.57□□□□□ -1.04
SUB1-204ENST00000504016 HIF1AQ16665 826 aa8.57□□□□□ -1.04
SUB1-204ENST00000504016 PRRT3Q5FWE3 981 aa8.57□□□□□ -1.04
SUB1-204ENST00000504016 ADH7P40394 386 aa8.56□□□□□ -1.04
SUB1-204ENST00000504016 BTLAQ7Z6A9 289 aa8.56□□□□□ -1.04
SUB1-204ENST00000504016 BHMTQ93088 406 aa8.56□□□□□ -1.04
SUB1-204ENST00000504016 PPP1R12CQ9BZL4 782 aa8.56□□□□□ -1.04
SUB1-204ENST00000504016 DPYDQ12882 1025 aa8.55□□□□□ -1.04
SUB1-204ENST00000504016 MICALL1Q8N3F8 863 aa8.55□□□□□ -1.04
SUB1-204ENST00000504016 STARD13Q9Y3M8 1113 aa8.55□□□□□ -1.04
SUB1-204ENST00000504016 LGR5O75473 907 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms