RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 SETDB2Q96T68 719 aa21.56■■□□□ 1.04
PDLIM7-210ENST00000503827 HACL1Q9UJ83 578 aa21.56■■□□□ 1.04
PDLIM7-210ENST00000503827 TBC1D2BQ9UPU7 963 aa21.56■■□□□ 1.04
PDLIM7-210ENST00000503827 ZNF330Q9Y3S2 320 aaPredicted RBP21.56■■□□□ 1.04
PDLIM7-210ENST00000503827 ADAMTSL1Q8N6G6 1762 aa21.56■■□□□ 1.04
PDLIM7-210ENST00000503827 NPM2Q86SE8 214 aaKnown RBP21.55■■□□□ 1.04
PDLIM7-210ENST00000503827 PCDH10Q9P2E7 1040 aa21.55■■□□□ 1.04
PDLIM7-210ENST00000503827 MLLT1Q03111 559 aaPredicted RBP21.54■■□□□ 1.04
PDLIM7-210ENST00000503827 CCDC93Q567U6 631 aa21.54■■□□□ 1.04
PDLIM7-210ENST00000503827 PNMA8AQ86V59 439 aaPredicted RBP21.54■■□□□ 1.04
PDLIM7-210ENST00000503827 TEX13AQ9BXU3 409 aaPredicted RBP21.54■■□□□ 1.04
PDLIM7-210ENST00000503827 WDR33Q9C0J8 1336 aaKnown RBP21.54■■□□□ 1.04
PDLIM7-210ENST00000503827 EPHX2P34913 555 aa21.53■■□□□ 1.04
PDLIM7-210ENST00000503827 IL6STP40189 918 aaPredicted RBP21.52■■□□□ 1.04
PDLIM7-210ENST00000503827 CNTROBQ8N137 903 aa21.52■■□□□ 1.04
PDLIM7-210ENST00000503827 ABT1Q9ULW3 272 aaKnown RBP21.52■■□□□ 1.04
PDLIM7-210ENST00000503827 CCDC85CA6NKD9 419 aa21.51■■□□□ 1.03
PDLIM7-210ENST00000503827 HMOX1P09601 288 aa21.51■■□□□ 1.03
PDLIM7-210ENST00000503827 FKBP4Q02790 459 aaKnown RBP eCLIP21.51■■□□□ 1.03
PDLIM7-210ENST00000503827 MTHFSDQ2M296 383 aaKnown RBP21.51■■□□□ 1.03
PDLIM7-210ENST00000503827 ZNF541Q9H0D2 1346 aa21.51■■□□□ 1.03
PDLIM7-210ENST00000503827 BCORQ6W2J9 1755 aa21.51■■□□□ 1.03
PDLIM7-210ENST00000503827 MAP1SQ66K74 1059 aaPredicted RBP21.5■■□□□ 1.03
PDLIM7-210ENST00000503827 C7orf43Q8WVR3 580 aa21.5■■□□□ 1.03
PDLIM7-210ENST00000503827 HEG1Q9ULI3 1381 aa21.49■■□□□ 1.03
PDLIM7-210ENST00000503827 ZNF496Q96IT1 587 aaPredicted RBP21.49■■□□□ 1.03
PDLIM7-210ENST00000503827 BEGAINQ9BUH8 593 aa21.49■■□□□ 1.03
PDLIM7-210ENST00000503827 ZNF277Q9NRM2 450 aaPredicted RBP21.49■■□□□ 1.03
PDLIM7-210ENST00000503827 CAMTA2O94983 1202 aa21.48■■□□□ 1.03
PDLIM7-210ENST00000503827 RGS19P49795 217 aa21.48■■□□□ 1.03
PDLIM7-210ENST00000503827 RNF123Q5XPI4 1314 aa21.48■■□□□ 1.03
PDLIM7-210ENST00000503827 NPR1P16066 1061 aa21.47■■□□□ 1.03
PDLIM7-210ENST00000503827 ZNF790Q6PG37 636 aa21.47■■□□□ 1.03
PDLIM7-210ENST00000503827 THSD7BQ9C0I4 1608 aa21.47■■□□□ 1.03
PDLIM7-210ENST00000503827 TEFQ10587 303 aa21.46■■□□□ 1.03
PDLIM7-210ENST00000503827 RTKN2Q8IZC4 609 aa21.46■■□□□ 1.03
PDLIM7-210ENST00000503827 SIPA1L3O60292 1781 aaPredicted RBP21.46■■□□□ 1.03
PDLIM7-210ENST00000503827 A1BGP04217 495 aa21.45■■□□□ 1.02
PDLIM7-210ENST00000503827 ECE1P42892 770 aa21.45■■□□□ 1.02
PDLIM7-210ENST00000503827 PAXIP1Q6ZW49 1069 aaPredicted RBP21.45■■□□□ 1.02
PDLIM7-210ENST00000503827 NBPF5PQ86XG9 351 aaPredicted RBP21.45■■□□□ 1.02
PDLIM7-210ENST00000503827 DZIP3Q86Y13 1208 aaKnown RBP21.45■■□□□ 1.02
PDLIM7-210ENST00000503827 GPC2Q8N158 579 aa21.45■■□□□ 1.02
PDLIM7-210ENST00000503827 DDX21Q9NR30 783 aaKnown RBP eCLIP21.45■■□□□ 1.02
PDLIM7-210ENST00000503827 KNSTRNQ9Y448 316 aa21.45■■□□□ 1.02
PDLIM7-210ENST00000503827 TRPM7Q96QT4 1865 aa21.45■■□□□ 1.02
PDLIM7-210ENST00000503827 FZD9O00144 591 aa21.44■■□□□ 1.02
PDLIM7-210ENST00000503827 IARSP41252 1262 aaKnown RBP21.44■■□□□ 1.02
PDLIM7-210ENST00000503827 CAPNS2Q96L46 248 aa21.43■■□□□ 1.02
PDLIM7-210ENST00000503827 FMNL2Q96PY5 1086 aa21.43■■□□□ 1.02
PDLIM7-210ENST00000503827 TIMELESSQ9UNS1 1208 aa21.42■■□□□ 1.02
PDLIM7-210ENST00000503827 GRM1Q13255 1194 aa21.41■■□□□ 1.02
PDLIM7-210ENST00000503827 CLEC4GQ6UXB4 293 aa21.41■■□□□ 1.02
PDLIM7-210ENST00000503827 SYNE4Q8N205 404 aa21.41■■□□□ 1.02
PDLIM7-210ENST00000503827 JDP2Q8WYK2 163 aa21.41■■□□□ 1.02
PDLIM7-210ENST00000503827 GPR101Q96P66 508 aaPredicted RBP21.41■■□□□ 1.02
PDLIM7-210ENST00000503827 ZNF652Q9Y2D9 606 aa21.41■■□□□ 1.02
PDLIM7-210ENST00000503827 KLRG2A4D1S0 409 aaPredicted RBP21.4■■□□□ 1.02
PDLIM7-210ENST00000503827 LMOD1P29536 600 aaPredicted RBP21.4■■□□□ 1.02
PDLIM7-210ENST00000503827 OLFM4Q6UX06 510 aa21.4■■□□□ 1.02
PDLIM7-210ENST00000503827 TPTE2Q6XPS3 522 aa21.4■■□□□ 1.02
PDLIM7-210ENST00000503827 GNAT3A8MTJ3 354 aa21.39■■□□□ 1.01
PDLIM7-210ENST00000503827 DIAPH1O60610 1272 aaKnown RBP21.39■■□□□ 1.01
PDLIM7-210ENST00000503827 ALDH1B1P30837 517 aa21.39■■□□□ 1.01
PDLIM7-210ENST00000503827 CYP4F22Q6NT55 531 aa21.39■■□□□ 1.01
PDLIM7-210ENST00000503827 IL17REQ8NFR9 667 aa21.39■■□□□ 1.01
PDLIM7-210ENST00000503827 CFAP44Q96MT7 982 aa21.39■■□□□ 1.01
PDLIM7-210ENST00000503827 EIF6P56537 245 aaKnown RBP21.38■■□□□ 1.01
PDLIM7-210ENST00000503827 EIF4G2P78344 907 aaKnown RBP eCLIP21.38■■□□□ 1.01
PDLIM7-210ENST00000503827 GJA3Q9Y6H8 435 aa21.38■■□□□ 1.01
PDLIM7-210ENST00000503827 LTBP1Q14766 1721 aa21.36■■□□□ 1.01
PDLIM7-210ENST00000503827 MAP2K2P36507 400 aa21.36■■□□□ 1.01
PDLIM7-210ENST00000503827 GAS2L2Q8NHY3 880 aa21.36■■□□□ 1.01
PDLIM7-210ENST00000503827 PSMD1Q99460 953 aa21.36■■□□□ 1.01
PDLIM7-210ENST00000503827 HSPA5P11021 654 aaKnown RBP21.35■■□□□ 1.01
PDLIM7-210ENST00000503827 FMR1Q06787 632 aaKnown RBP eCLIP21.35■■□□□ 1.01
PDLIM7-210ENST00000503827 TSKSQ9UJT2 592 aa21.35■■□□□ 1.01
PDLIM7-210ENST00000503827 NIP7Q9Y221 180 aaKnown RBP eCLIP21.35■■□□□ 1.01
PDLIM7-210ENST00000503827 CASP8AP2Q9UKL3 1982 aa21.35■■□□□ 1.01
PDLIM7-210ENST00000503827 PIP4K2AP48426 406 aaPredicted RBP21.34■■□□□ 1.01
PDLIM7-210ENST00000503827 USP16Q9Y5T5 823 aa21.34■■□□□ 1.01
PDLIM7-210ENST00000503827 TLL2Q9Y6L7 1015 aa21.34■■□□□ 1.01
PDLIM7-210ENST00000503827 FAM177BA6PVY3 158 aa21.33■■□□□ 1.01
PDLIM7-210ENST00000503827 BTBD11A6QL63 1104 aa21.33■■□□□ 1.01
PDLIM7-210ENST00000503827 CA12O43570 354 aa21.33■■□□□ 1.01
PDLIM7-210ENST00000503827 GTF2E1P29083 439 aaPredicted RBP21.33■■□□□ 1.01
PDLIM7-210ENST00000503827 AMER1Q5JTC6 1135 aaPredicted RBP21.33■■□□□ 1.01
PDLIM7-210ENST00000503827 CST9Q5W186 159 aa21.33■■□□□ 1.01
PDLIM7-210ENST00000503827 USP50Q70EL3 339 aaPredicted RBP21.33■■□□□ 1.01
PDLIM7-210ENST00000503827 MCOLN1Q9GZU1 580 aa21.33■■□□□ 1.01
PDLIM7-210ENST00000503827 RGL2O15211 777 aa21.32■■□□□ 1
PDLIM7-210ENST00000503827 EPS15P42566 896 aa21.32■■□□□ 1
PDLIM7-210ENST00000503827 CC2D2BQ6DHV5 1058 aa21.32■■□□□ 1
PDLIM7-210ENST00000503827 TRAF5O00463 557 aa21.31■■□□□ 1
PDLIM7-210ENST00000503827 KCNQ3O43525 872 aa21.31■■□□□ 1
PDLIM7-210ENST00000503827 AOC2O75106 756 aa21.31■■□□□ 1
PDLIM7-210ENST00000503827 SCNN1DP51172 638 aa21.31■■□□□ 1
PDLIM7-210ENST00000503827 SNED1Q8TER0 1413 aa21.3■■□□□ 1
PDLIM7-210ENST00000503827 CEMIPQ8WUJ3 1361 aa21.3■■□□□ 1
PDLIM7-210ENST00000503827 COL4A5P29400 1685 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms