RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 BCORQ6W2J9 1755 aa8.73□□□□□ -1.01
TOPBP1-203ENST00000503464 NUP98P52948 1817 aa8.73□□□□□ -1.01
TOPBP1-203ENST00000503464 KSR2Q6VAB6 950 aa8.73□□□□□ -1.01
TOPBP1-203ENST00000503464 CENPQQ7L2Z9 268 aaPredicted RBP8.73□□□□□ -1.01
TOPBP1-203ENST00000503464 FBXO41Q8TF61 875 aa8.73□□□□□ -1.01
TOPBP1-203ENST00000503464 DNAAF4Q8WXU2 420 aa8.73□□□□□ -1.01
TOPBP1-203ENST00000503464 CHMP4AQ9BY43 222 aa8.73□□□□□ -1.01
TOPBP1-203ENST00000503464 RGS17Q9UGC6 210 aaPredicted RBP8.73□□□□□ -1.01
TOPBP1-203ENST00000503464 MAP3K2Q9Y2U5 619 aa8.73□□□□□ -1.01
TOPBP1-203ENST00000503464 A0A0G2JS52 829 aa8.72□□□□□ -1.01
TOPBP1-203ENST00000503464 CYP19A1P11511 503 aaPredicted RBP8.72□□□□□ -1.01
TOPBP1-203ENST00000503464 MYT1Q01538 1121 aa8.72□□□□□ -1.01
TOPBP1-203ENST00000503464 EVX2Q03828 476 aa8.72□□□□□ -1.01
TOPBP1-203ENST00000503464 AIMP1Q12904 312 aaKnown RBP8.72□□□□□ -1.01
TOPBP1-203ENST00000503464 HDAC1Q13547 482 aaPredicted RBP8.72□□□□□ -1.01
TOPBP1-203ENST00000503464 ITPK1Q13572 414 aa8.72□□□□□ -1.01
TOPBP1-203ENST00000503464 COPS6Q7L5N1 327 aa8.72□□□□□ -1.01
TOPBP1-203ENST00000503464 USP44Q9H0E7 712 aa8.72□□□□□ -1.01
TOPBP1-203ENST00000503464 IBTKQ9P2D0 1353 aaPredicted RBP8.72□□□□□ -1.01
TOPBP1-203ENST00000503464 TNS1Q9HBL0 1735 aaKnown RBP8.71□□□□□ -1.01
TOPBP1-203ENST00000503464 IGKV5-2P06315 115 aa8.71□□□□□ -1.02
TOPBP1-203ENST00000503464 CWF19L2Q2TBE0 894 aaKnown RBP8.71□□□□□ -1.02
TOPBP1-203ENST00000503464 TTLL7Q6ZT98 887 aa8.71□□□□□ -1.02
TOPBP1-203ENST00000503464 C4AP0C0L4 1744 aa8.71□□□□□ -1.02
TOPBP1-203ENST00000503464 C4BP0C0L5 1744 aa8.71□□□□□ -1.02
TOPBP1-203ENST00000503464 SCN7AQ01118 1682 aa8.7□□□□□ -1.02
TOPBP1-203ENST00000503464 LOC102724428A0A0B4J2F2 783 aa8.7□□□□□ -1.02
TOPBP1-203ENST00000503464 SIK1P57059 783 aa8.7□□□□□ -1.02
TOPBP1-203ENST00000503464 ZNF772Q68DY9 489 aaPredicted RBP8.7□□□□□ -1.02
TOPBP1-203ENST00000503464 CEP85Q6P2H3 762 aa8.7□□□□□ -1.02
TOPBP1-203ENST00000503464 INTS5Q6P9B9 1019 aaKnown RBP8.7□□□□□ -1.02
TOPBP1-203ENST00000503464 ANKRD44Q8N8A2 993 aa8.7□□□□□ -1.02
TOPBP1-203ENST00000503464 SRCIN1Q9C0H9 1055 aa8.7□□□□□ -1.02
TOPBP1-203ENST00000503464 ZBTB1Q9Y2K1 713 aa8.7□□□□□ -1.02
TOPBP1-203ENST00000503464 EP400Q96L91 3159 aa8.69□□□□□ -1.02
TOPBP1-203ENST00000503464 CASZ1Q86V15 1759 aa8.69□□□□□ -1.02
TOPBP1-203ENST00000503464 ALDH1L1O75891 902 aa8.69□□□□□ -1.02
TOPBP1-203ENST00000503464 NBPF7P0C2Y1 421 aaPredicted RBP8.69□□□□□ -1.02
TOPBP1-203ENST00000503464 RBM6P78332 1123 aaKnown RBP8.69□□□□□ -1.02
TOPBP1-203ENST00000503464 ANKRD13DQ6ZTN6 518 aa8.69□□□□□ -1.02
TOPBP1-203ENST00000503464 SMC5Q8IY18 1101 aa8.69□□□□□ -1.02
TOPBP1-203ENST00000503464 LINS1Q8NG48 757 aa8.69□□□□□ -1.02
TOPBP1-203ENST00000503464 PLBD2Q8NHP8 589 aa8.69□□□□□ -1.02
TOPBP1-203ENST00000503464 METTL22Q9BUU2 404 aaPredicted RBP8.69□□□□□ -1.02
TOPBP1-203ENST00000503464 TEX13AQ9BXU3 409 aaPredicted RBP8.69□□□□□ -1.02
TOPBP1-203ENST00000503464 UTYO14607 1347 aa8.69□□□□□ -1.02
TOPBP1-203ENST00000503464 UBR3Q6ZT12 1888 aa8.68□□□□□ -1.02
TOPBP1-203ENST00000503464 NEURL1BA8MQ27 555 aa8.68□□□□□ -1.02
TOPBP1-203ENST00000503464 DDX58O95786 925 aaKnown RBP8.68□□□□□ -1.02
TOPBP1-203ENST00000503464 ATP6V1AP38606 617 aa8.68□□□□□ -1.02
TOPBP1-203ENST00000503464 KCNQ4P56696 695 aa8.68□□□□□ -1.02
TOPBP1-203ENST00000503464 POTEAQ6S8J7 498 aa8.68□□□□□ -1.02
TOPBP1-203ENST00000503464 KRT27Q7Z3Y8 459 aa8.68□□□□□ -1.02
TOPBP1-203ENST00000503464 RIC3Q7Z5B4 369 aa8.68□□□□□ -1.02
TOPBP1-203ENST00000503464 LINC00116Q8NCU8 138 aa8.68□□□□□ -1.02
TOPBP1-203ENST00000503464 SMARCC1Q92922 1105 aaPredicted RBP8.68□□□□□ -1.02
TOPBP1-203ENST00000503464 KAZALD1Q96I82 304 aa8.68□□□□□ -1.02
TOPBP1-203ENST00000503464 MYD88Q99836 296 aa8.68□□□□□ -1.02
TOPBP1-203ENST00000503464 CHMP4BQ9H444 224 aaKnown RBP8.68□□□□□ -1.02
TOPBP1-203ENST00000503464 RWDD1Q9H446 243 aaPredicted RBP8.68□□□□□ -1.02
TOPBP1-203ENST00000503464 LRRFIP2Q9Y608 721 aaKnown RBP8.68□□□□□ -1.02
TOPBP1-203ENST00000503464 TUBGCP6Q96RT7 1819 aa8.68□□□□□ -1.02
TOPBP1-203ENST00000503464 PNMA6EA0A0J9YXQ4 647 aa8.67□□□□□ -1.02
TOPBP1-203ENST00000503464 RGPD3A6NKT7 1758 aaPredicted RBP8.67□□□□□ -1.02
TOPBP1-203ENST00000503464 STARD3NLO95772 234 aa8.67□□□□□ -1.02
TOPBP1-203ENST00000503464 GNAI2P04899 355 aa8.67□□□□□ -1.02
TOPBP1-203ENST00000503464 GNAI3P08754 354 aa8.67□□□□□ -1.02
TOPBP1-203ENST00000503464 CRKLP46109 303 aaKnown RBP8.67□□□□□ -1.02
TOPBP1-203ENST00000503464 RGPD4Q7Z3J3 1758 aa8.67□□□□□ -1.02
TOPBP1-203ENST00000503464 ZBTB3Q9H5J0 574 aa8.67□□□□□ -1.02
TOPBP1-203ENST00000503464 PDZRN3Q9UPQ7 1066 aa8.67□□□□□ -1.02
TOPBP1-203ENST00000503464 MYH3P11055 1940 aa8.66□□□□□ -1.02
TOPBP1-203ENST00000503464 LAMB2P55268 1798 aa8.66□□□□□ -1.02
TOPBP1-203ENST00000503464 COL24A1Q17RW2 1714 aa8.66□□□□□ -1.02
TOPBP1-203ENST00000503464 MAP3K15Q6ZN16 1313 aa8.66□□□□□ -1.02
TOPBP1-203ENST00000503464 ATP5J2-PTCD1G3V325 749 aa8.66□□□□□ -1.02
TOPBP1-203ENST00000503464 GRM8O00222 908 aa8.66□□□□□ -1.02
TOPBP1-203ENST00000503464 UBTFL1P0CB47 393 aaPredicted RBP8.66□□□□□ -1.02
TOPBP1-203ENST00000503464 PDE4AP27815 886 aa8.66□□□□□ -1.02
TOPBP1-203ENST00000503464 IL6STP40189 918 aaPredicted RBP8.66□□□□□ -1.02
TOPBP1-203ENST00000503464 EIF5P55010 431 aaKnown RBP8.66□□□□□ -1.02
TOPBP1-203ENST00000503464 CASP7P55210 303 aa8.66□□□□□ -1.02
TOPBP1-203ENST00000503464 GCKRQ14397 625 aa8.66□□□□□ -1.02
TOPBP1-203ENST00000503464 HLFQ16534 295 aa8.66□□□□□ -1.02
TOPBP1-203ENST00000503464 RPAP2Q8IXW5 612 aaPredicted RBP8.66□□□□□ -1.02
TOPBP1-203ENST00000503464 SUCLG2Q96I99 432 aa8.66□□□□□ -1.02
TOPBP1-203ENST00000503464 BCL11BQ9C0K0 894 aaPredicted RBP8.66□□□□□ -1.02
TOPBP1-203ENST00000503464 CCDC87Q9NVE4 849 aa8.66□□□□□ -1.02
TOPBP1-203ENST00000503464 DDX60Q8IY21 1712 aaKnown RBP8.66□□□□□ -1.02
TOPBP1-203ENST00000503464 COL15A1P39059 1388 aa8.65□□□□□ -1.02
TOPBP1-203ENST00000503464 CNTNAP4Q9C0A0 1308 aa8.65□□□□□ -1.02
TOPBP1-203ENST00000503464 PITPNM1O00562 1244 aa8.65□□□□□ -1.02
TOPBP1-203ENST00000503464 ATP8B2P98198 1209 aa8.65□□□□□ -1.02
TOPBP1-203ENST00000503464 NUCB1Q02818 461 aa8.65□□□□□ -1.02
TOPBP1-203ENST00000503464 EPHA10Q5JZY3 1008 aa8.65□□□□□ -1.02
TOPBP1-203ENST00000503464 FAM196AQ6ZSG2 479 aa8.65□□□□□ -1.02
TOPBP1-203ENST00000503464 AMIGO3Q86WK7 504 aa8.65□□□□□ -1.02
TOPBP1-203ENST00000503464 ISCA1Q9BUE6 129 aa8.65□□□□□ -1.02
TOPBP1-203ENST00000503464 DCTPP1Q9H773 170 aa8.65□□□□□ -1.02
TOPBP1-203ENST00000503464 ZNF330Q9Y3S2 320 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms