RNA–Protein interactions for RNA: ENST00000503255.5

GYPB-203, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-203ENST00000503255 NEUROD4Q9HD90 331 aa8.29□□□□□ -1.08
GYPB-203ENST00000503255 AVENQ9NQS1 362 aaPredicted RBP8.29□□□□□ -1.08
GYPB-203ENST00000503255 NOP53Q9NZM5 478 aaKnown RBP8.29□□□□□ -1.08
GYPB-203ENST00000503255 PIK3R2O00459 728 aa8.28□□□□□ -1.08
GYPB-203ENST00000503255 ITGB7P26010 798 aa8.28□□□□□ -1.08
GYPB-203ENST00000503255 CLDN10P78369 228 aa8.28□□□□□ -1.08
GYPB-203ENST00000503255 C8orf86Q6ZUL3 223 aa8.28□□□□□ -1.08
GYPB-203ENST00000503255 ELOA3CA0A087WX78 387 aaPredicted RBP8.27□□□□□ -1.09
GYPB-203ENST00000503255 SERTM1A2A2V5 107 aa8.27□□□□□ -1.09
GYPB-203ENST00000503255 ELOA3DA6NLF2 546 aaPredicted RBP8.27□□□□□ -1.09
GYPB-203ENST00000503255 FAM229AH3BQW9 127 aa8.27□□□□□ -1.09
GYPB-203ENST00000503255 LZTS3O60299 673 aaPredicted RBP8.27□□□□□ -1.09
GYPB-203ENST00000503255 ELOA3BQ3SY89 546 aa8.27□□□□□ -1.09
GYPB-203ENST00000503255 HDGFL1Q5TGJ6 251 aa8.27□□□□□ -1.09
GYPB-203ENST00000503255 NFATC2IPQ8NCF5 419 aa8.27□□□□□ -1.09
GYPB-203ENST00000503255 ELOA3Q8NG57 546 aa8.27□□□□□ -1.09
GYPB-203ENST00000503255 HSH2DQ96JZ2 352 aa8.27□□□□□ -1.09
GYPB-203ENST00000503255 TSPAN10Q9H1Z9 355 aaPredicted RBP8.27□□□□□ -1.09
GYPB-203ENST00000503255 CCDC102BQ68D86 513 aa8.26□□□□□ -1.09
GYPB-203ENST00000503255 ZNF280CQ8ND82 737 aa8.26□□□□□ -1.09
GYPB-203ENST00000503255 UCN2Q96RP3 112 aa8.26□□□□□ -1.09
GYPB-203ENST00000503255 SFI1A8K8P3 1242 aa8.25□□□□□ -1.09
GYPB-203ENST00000503255 ALAS2P22557 587 aa8.25□□□□□ -1.09
GYPB-203ENST00000503255 LAMC2Q13753 1193 aa8.25□□□□□ -1.09
GYPB-203ENST00000503255 Q8N3U1 123 aa8.25□□□□□ -1.09
GYPB-203ENST00000503255 RHPN1Q8TCX5 695 aa8.25□□□□□ -1.09
GYPB-203ENST00000503255 MDFIQ99750 246 aa8.25□□□□□ -1.09
GYPB-203ENST00000503255 SEMA6BQ9H3T3 888 aa8.25□□□□□ -1.09
GYPB-203ENST00000503255 STARD13Q9Y3M8 1113 aa8.25□□□□□ -1.09
GYPB-203ENST00000503255 USP17L3A6NCW0 530 aa8.24□□□□□ -1.09
GYPB-203ENST00000503255 USP17L4A6NCW7 530 aa8.24□□□□□ -1.09
GYPB-203ENST00000503255 M0R082 166 aa8.24□□□□□ -1.09
GYPB-203ENST00000503255 USP17L2Q6R6M4 530 aa8.24□□□□□ -1.09
GYPB-203ENST00000503255 USP17L1Q7RTZ2 530 aa8.24□□□□□ -1.09
GYPB-203ENST00000503255 ZNF417Q8TAU3 575 aa8.24□□□□□ -1.09
GYPB-203ENST00000503255 ZNF587Q96SQ5 575 aaPredicted RBP8.24□□□□□ -1.09
GYPB-203ENST00000503255 RAD21O60216 631 aa8.23□□□□□ -1.09
GYPB-203ENST00000503255 COL9A3Q14050 684 aaPredicted RBP8.23□□□□□ -1.09
GYPB-203ENST00000503255 WWC1Q8IX03 1113 aa8.23□□□□□ -1.09
GYPB-203ENST00000503255 OGFOD1Q8N543 542 aa8.23□□□□□ -1.09
GYPB-203ENST00000503255 TSEN2Q8NCE0 465 aaKnown RBP8.23□□□□□ -1.09
GYPB-203ENST00000503255 GAS2L2Q8NHY3 880 aa8.23□□□□□ -1.09
GYPB-203ENST00000503255 CEP63Q96MT8 703 aa8.23□□□□□ -1.09
GYPB-203ENST00000503255 PHACTR1Q9C0D0 580 aa8.23□□□□□ -1.09
GYPB-203ENST00000503255 MKRN1Q9UHC7 482 aaKnown RBP8.23□□□□□ -1.09
GYPB-203ENST00000503255 LGR5O75473 907 aa8.22□□□□□ -1.09
GYPB-203ENST00000503255 ALBP02768 609 aa8.22□□□□□ -1.09
GYPB-203ENST00000503255 GATA4P43694 442 aa8.22□□□□□ -1.09
GYPB-203ENST00000503255 SPEM2Q0P670 501 aa8.22□□□□□ -1.09
GYPB-203ENST00000503255 TRIM50Q86XT4 487 aa8.22□□□□□ -1.09
GYPB-203ENST00000503255 ZNF594Q96JF6 807 aaPredicted RBP8.22□□□□□ -1.09
GYPB-203ENST00000503255 SIN3BO75182 1162 aa8.21□□□□□ -1.1
GYPB-203ENST00000503255 SPATA31C1P0DKV0 1188 aa8.21□□□□□ -1.1
GYPB-203ENST00000503255 UBTFP17480 764 aaKnown RBP8.21□□□□□ -1.1
GYPB-203ENST00000503255 MICALL1Q8N3F8 863 aa8.21□□□□□ -1.1
GYPB-203ENST00000503255 BRD7Q9NPI1 651 aa8.21□□□□□ -1.1
GYPB-203ENST00000503255 ADARB2-AS1A8MUL3 147 aa8.2□□□□□ -1.1
GYPB-203ENST00000503255 C21orf2O43822 256 aa8.2□□□□□ -1.1
GYPB-203ENST00000503255 PSMA6P60900 246 aaKnown RBP8.2□□□□□ -1.1
GYPB-203ENST00000503255 PLEKHM2Q8IWE5 1019 aa8.2□□□□□ -1.1
GYPB-203ENST00000503255 SUSD3Q96L08 255 aa8.2□□□□□ -1.1
GYPB-203ENST00000503255 IGFLR1Q9H665 355 aa8.2□□□□□ -1.1
GYPB-203ENST00000503255 ATP9BO43861 1147 aa8.19□□□□□ -1.1
GYPB-203ENST00000503255 PPP1R12BO60237 982 aaPredicted RBP8.19□□□□□ -1.1
GYPB-203ENST00000503255 DKK1O94907 266 aa8.19□□□□□ -1.1
GYPB-203ENST00000503255 ATP1A2P50993 1020 aa8.19□□□□□ -1.1
GYPB-203ENST00000503255 GRIK4Q16099 956 aa8.19□□□□□ -1.1
GYPB-203ENST00000503255 CHMP7Q8WUX9 453 aaPredicted RBP8.19□□□□□ -1.1
GYPB-203ENST00000503255 ADH7P40394 386 aa8.18□□□□□ -1.1
GYPB-203ENST00000503255 TBC1D8BQ0IIM8 1120 aa8.18□□□□□ -1.1
GYPB-203ENST00000503255 C1orf53Q5VUE5 145 aa8.18□□□□□ -1.1
GYPB-203ENST00000503255 LARGE2Q8N3Y3 721 aa8.18□□□□□ -1.1
GYPB-203ENST00000503255 TNFRSF25Q93038 417 aa8.18□□□□□ -1.1
GYPB-203ENST00000503255 BHMTQ93088 406 aa8.18□□□□□ -1.1
GYPB-203ENST00000503255 NGLY1Q96IV0 654 aa8.18□□□□□ -1.1
GYPB-203ENST00000503255 KCNH4Q9UQ05 1017 aa8.18□□□□□ -1.1
GYPB-203ENST00000503255 PALM3A6NDB9 673 aaPredicted RBP8.17□□□□□ -1.1
GYPB-203ENST00000503255 PRRT3Q5FWE3 981 aa8.17□□□□□ -1.1
GYPB-203ENST00000503255 ALDH16A1Q8IZ83 802 aa8.17□□□□□ -1.1
GYPB-203ENST00000503255 TPSG1Q9NRR2 321 aa8.17□□□□□ -1.1
GYPB-203ENST00000503255 ATAD2Q6PL18 1390 aa8.17□□□□□ -1.1
GYPB-203ENST00000503255 TYRO3Q06418 890 aa8.16□□□□□ -1.1
GYPB-203ENST00000503255 TRIM28Q13263 835 aaKnown RBP8.16□□□□□ -1.1
GYPB-203ENST00000503255 RSPO4Q2I0M5 234 aaPredicted RBP8.16□□□□□ -1.1
GYPB-203ENST00000503255 C20orf204Q6ZNR8 217 aa8.16□□□□□ -1.1
GYPB-203ENST00000503255 SCG3Q8WXD2 468 aaKnown RBP8.16□□□□□ -1.1
GYPB-203ENST00000503255 CLUAP1Q96AJ1 413 aa8.16□□□□□ -1.1
GYPB-203ENST00000503255 ANKIB1Q9P2G1 1089 aa8.16□□□□□ -1.1
GYPB-203ENST00000503255 TFIP11Q9UBB9 837 aaKnown RBP8.16□□□□□ -1.1
GYPB-203ENST00000503255 CHMP3Q9Y3E7 222 aa8.16□□□□□ -1.1
GYPB-203ENST00000503255 GPC6Q9Y625 555 aaPredicted RBP8.16□□□□□ -1.1
GYPB-203ENST00000503255 APBA3O96018 575 aa8.15□□□□□ -1.1
GYPB-203ENST00000503255 NID1P14543 1247 aa8.15□□□□□ -1.1
GYPB-203ENST00000503255 RASA1P20936 1047 aa8.15□□□□□ -1.1
GYPB-203ENST00000503255 HIRAP54198 1017 aaPredicted RBP8.14□□□□□ -1.11
GYPB-203ENST00000503255 TRAPPC3LQ5T215 181 aa8.14□□□□□ -1.11
GYPB-203ENST00000503255 POTEAQ6S8J7 498 aa8.14□□□□□ -1.11
GYPB-203ENST00000503255 NUDT8Q8WV74 236 aa8.14□□□□□ -1.11
GYPB-203ENST00000503255 M0R2N6 131 aa8.13□□□□□ -1.11
GYPB-203ENST00000503255 KCNQ4P56696 695 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms